Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 2e-13 >seq10 Length=460275 Score = 91.5 bits (100), Expect = 2e-13 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 59923 TTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGCATCATTTGCACAAC 59982 || || | || ||| |||||| ||| | ||||| | | | | |||||||| || Sbjct 101383 TTCAAAAGAAGGCATCATGGGCAATGAAATGGATCAATGATAATGATTCATTTGCTGAAA 101324 Query 59983 GTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 | || || ||||| || ||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 101323 GACTAATTGCTTTCGC-TGCTGTTGAAGGCATCTTCTTCTCTGGTTCTTTTTGTGCCATT 101265 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTC 60100 || ||| |||||||| | || ||||| || || | |||||||| || |||| || Sbjct 101264 TTTTGGATCAAAAAGAGATCACTTATGCCAGGACTAACATTCTCCAATGAATTGATATC 101206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519472452880