Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq37 82.4 6e-11 >seq37 Length=526299 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||||||||| | |||||||| || || || || || || || ||||| Sbjct 191229 AAAATGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCA 191288 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 |||| || | | || | |||| |||||| || || ||||| | || ||| Sbjct 191289 TCAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 191348 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || ||||||| || ||||| || || ||||| |||||| | ||| | | || || Sbjct 191349 TAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTAT 191408 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||| |||| ||||| ||||| ||| | || || |||| |||| || Sbjct 191409 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGG 191458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410794081423802