Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq10 412 3e-110 seq4 398 7e-106 seq75 343 1e-89 seq80 302 4e-77 seq142 96.9 3e-15 >seq10 Length=733974 Score = 412 bits (456), Expect = 3e-110 Identities = 1209/1825 (66%), Gaps = 57/1825 (3%) Strand=Plus/Minus Query 36871 TAAAAATGCATACTGGTCAGTTTTG-CGTATGTAGGATTATCTATATATATTGTCATTGA 36929 ||||||||||| |||| ||| | | || || || | | | |||| || | | || Sbjct 167039 TAAAAATGCATGGATGTCACTTTGGACATA-GTTGGTTCAGCCATATGAATATTTAAGGA 166981 Query 36930 TTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGA 36989 ||| |||| ||| ||||| | | ||||| | ||| | | || ||| ||||| ||| Sbjct 166980 TTGGCTTTAATCAATAAATGGAGCTCTGGAAGTTGCTAAATTCAATATAGCTTTTTAAGA 166921 Query 36990 TATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAA---ATCTAAATGTTG 37046 || |||||||| |||||||||| || ||| || |||| ||| | ||||| || | Sbjct 166920 GATTTCCCAAACAGTTTTATATAATTATTTAATGTTATTTGGAATTTCATCTATATTCTA 166861 Query 37047 AATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTAT----TCCACATATTTC 37102 | ||||||||||| | | | | | || || || |||| |||| | |||| Sbjct 166860 CACAGAACCATTATTCATGATTAATTTGTTTTTAAT----TTATGGCGTCCATAAATTT- 166806 Query 37103 TACTT--ATTAGTTCTCTCAA-TAGGTGTGGATTTA--CAACCTGAAAATCTCCAGATAA 37157 | || || | || |||| || || ||||||| || | || ||||||| || Sbjct 166805 -AGTTCAATCAAATCA-TCAACTAAATGAGGATTTATGCATACG--AATTCTCCAGCCAA 166750 Query 37158 TACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATAT 37217 ||||||||||||||||||||| | ||||||||||| | || |||||||| | || | Sbjct 166749 TACTCTTCTTGTATATATATTAGTTGTATATGGTTCGAATGATTCATTATTT-TAAAGAA 166691 Query 37218 TTGAGAT-GTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTG 37276 || || | || |||||||| ||||||||||| |||| | |||||||| ||||||| Sbjct 166690 TTTAGCTCGTTGATGCAGTTGGCATTGGTGCAATTAATAAAGAATTTCTCATTCCATGTT 166631 Query 37277 TATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACA 37336 | |||| ||| ||||| | ||||||| |||| | || | | | ||||| Sbjct 166630 TCATAATATTCTATTTTAAAGTAGTCCAATCATATAATTATGGAGTGATGCC---CCACA 166574 Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396 ||||| |||||| || |||| |||||| | | || | | |||||||| ||| Sbjct 166573 TATCAAATTGTAATATTCCTTATGAGGCTGGACTACCAGTAAAAGACTCATAAGATCC-- 166516 Query 37397 AAATTTT--AGCTAGTTCGCAACTAGAT-TCTAG--TGCGGCATAATATATTGTTTCGAA 37451 ||||||| ||| | ||| || | ||| | || ||| || | ||||||||||| || Sbjct 166515 AAATTTTTAAGCCAATTC--AAAT-GATCTTTAACATGCTCCAAAGTATATTGTTTCAAA 166459 Query 37452 AATTTGTATATTTAATATTTTT-GCTTCTTCGCTATCGAATGCATAGCCCAATAATATAA 37510 ||||| || || | || | |||||||| ||| |||| || | | | Sbjct 166458 AATTT-TAGCGTTCAAATCTAAAGCTTCTTCTGAATCAAATGGTATTTTCATTCTTTGTA 166400 Query 37511 ACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAG 37570 | ||||||| ||||| | || || || || || ||||||||||| ||||| | | || Sbjct 166399 ATGCATCAGCAAAACCTTAGACTCCAATTCCAATTGGTCTATGTTTTTTATT-GCTGTAT 166341 Query 37571 AC-GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGT 37629 | | || | | || || ||| | || | ||| || | | ||||||||||| | | | Sbjct 166340 TCTGCTTATTTAACAGGGTAAAAGTTCAAATCAATGACTATATTTAGATTTGTTGTAATT 166281 Query 37630 ATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTAT---TAACAAATTTA 37686 ||||| |||||| ||| || | || |||| |||| || | | || || Sbjct 166280 ATTTTAGTAATTTCCAACAATTTATTAAAATCAAATGTTTTATCATCTTTGATTAACTTT 166221 Query 37687 CTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTAC-TAAATTGTAT 37745 ||| |||| | |||||||| ||||||| ||||||| || | || ||| || Sbjct 166220 TACAAATTAATACTAGCAAGATTACAAACAGCAATTTCATCTG-GTGATGTATATTAAAT 166162 Query 37746 AATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTT 37805 ||| ||||| || | |||||| | || ||||| ||||| ||| ||| ||||| Sbjct 166161 AATTTCTGTGCATAAATTACTACTCTTTATAGTTCCTAAATTTTTTTAATTACTTTTTTA 166102 Query 37806 ATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAAT 37865 |||||| ||||||||||| | ||||| ||| ||| |||| ||| || ||||| Sbjct 166101 ATTACATGAATCTTTATACAACATATATGGCAATCCAGTAGAGATTTAAGCATCAATAAT 166042 Query 37866 AGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGTTTCGTATTC 37925 || |||||| ||| || || | | || || | || || | ||| ||||| Sbjct 166041 TTCTTACCATAATTATCTAGCCTTCATTGTAACTCTACCCATATTTTTAGATTCATATTC 165982 Query 37926 TATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGG 37985 ||| || |||||||| || | || | ||| | | ||||||||||| ||| Sbjct 165981 ACAATACAACTTGTTAAATTCTTATCCATAACAATCTTAAAGACCTGGACATTCATTTGG 165922 Query 37986 ACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCA 38045 ||||||| || ||| |||| || | || || | || ||| |||||||| |||| ||| Sbjct 165921 GCACATTAAAGTCCAATCTTAGTCATCTTTAACTCTTTACATGAATAAATCTGGTATCCA 165862 Query 38046 TAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT 38105 || | |||||||||| | | ||| |||||||| | || ||| |||||||| | Sbjct 165861 CAAACCTAAAAATAAATCTCTTGCTCTTTATTCTTCTATTCCATGATTTTTTCTTAA--T 165804 Query 38106 TAGAA-AATCGAAT-ATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGT 38163 || || || | || |||||| |||||||| || | ||| || | | | ||| | Sbjct 165803 TATAAGAAACTTATAATATCACTATGCCATGGCTCCAAATATATAGCAAAAGAACCTTTT 165744 Query 38164 CTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGT 38223 |||||| | ||||| | || | ||||||| |||| | |||| | | ||||||| ||| Sbjct 165743 CTTTTACCGCCTCCTTAATCTACATATCTAGCTGTATCATTAAAAACCTTTAACATTGGT 165684 Query 38224 ACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTA 38283 |||| ||||||| | || || | || |||||| || | | || || ||| || Sbjct 165683 ACTAAACCATTACTAATTCCATTAGTTCCTCTAATATAACTATCTTAAGATCTTATTTT- 165625 Query 38284 CTTATCGAC--AATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATTGTTTTAAC 38340 | | || ||||||||||| ||||| || ||| | ||||| || ||| |||||| Sbjct 165624 -TGAAACACTTAATCCTATTCCTCCTGC-TGATTTACTAATTAAGGCACATCTTTTTAAA 165567 Query 38341 GTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATT 38400 || ||| | || || ||||| ||||| || || | |||||| |||||| Sbjct 165566 GTTTCATAAATTCCATCTATTGAATCATCTACCATATCTAACAAAAAACATGATGACATT 165507 Query 38401 TGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCC 38460 | ||| | ||||| || |||||||||||| |||| |||||| | || |||| | Sbjct 165506 TAAGGATAAGGAGTACCACTGTTAAATAATGTTGGAGTTGCATGAGTAAAAAATTTCTAA 165447 Query 38461 GACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGAT 38520 |||| ||| ||| |||| | | | | | ||| | || ||||| | | Sbjct 165446 GACATTAAATGATAAGTTTAGAATGCTGACTAAAGATCTTCTTTATGGATACCAATACTA 165387 Query 38521 ACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATAC 38580 || ||||||| | | || ||||||||| || || ||| | || | || ||| Sbjct 165386 ACTCTCATTAATAATTATTATGGTCTTTCAATCGGCTTCTTACCTTACTTTAATAAATAA 165327 Query 38581 GATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTATGCTATT 38640 | | ||||| || || | |||||| || |||| ||||||||| ||||| || Sbjct 165326 CTTCTCTCTAAAGTCTTAAAACCAAAAAAATCATATTGATAATCTCTTTCGTAATTAATC 165267 Query 38641 ACATTATCGATTATATCTCTATGTT 38665 | || | ||||||||| ||| || Sbjct 165266 TCTTTTTAAATTATATCTTTATTTT 165242 >seq4 Length=867223 Score = 398 bits (440), Expect = 7e-106 Identities = 1225/1853 (66%), Gaps = 49/1853 (3%) Strand=Plus/Minus Query 36839 ACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTG-CG 36897 |||| || ||||||| || | ||| | || ||||||||| || | ||| | | Sbjct 330822 ACATACCTGTTTTTAATCCTTTTTCCCAAGCATAGAAATGCATAGATGTTACTTTAGACA 330763 Query 36898 TATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTG 36957 || ||||| | | | |||| || ||| ||||| ||||| ||||||||| | | |||| Sbjct 330762 TA-GTAGGTTCAGCCATATGAATATTCAATGATTAACTTTAATCTATAAATGGAGCTCTT 330704 Query 36958 TCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGT 37017 | ||| | | ||| ||| ||||| ||||||||||||||| |||||||||| || | Sbjct 330703 GAAGTTGCTAAATTTAATATAGCTTTTTAAGATATCTCCCAAACGGTTTTATATAATTAT 330644 Query 37018 TTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTA 37074 || ||||||| ||| | ||| | || || || |||||||||| | | | | | Sbjct 330643 TTAATATTATTTGGAATTTCTTCTATATTTTAGATTGAACCATTATTCATGATTAATTTG 330584 Query 37075 TTCTTTATGTCATTAT-TCCACATATTTCTACT-TATTAGTTCTCTCAA-TAGGTGTGGA 37131 || || || | || | |||| | ||| | | | ||| | || |||| ||| || ||| Sbjct 330583 TTTTTAATTT-ATGGTGTCCATAAATT-CAATTCTATCAAATCA-TCAACTAGATGAGGA 330527 Query 37132 TTTA--CAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATG 37189 |||| || | || ||||||| ||||||||||||||||| ||||| ||||||||| Sbjct 330526 TTTATGCATACG--AATTCTCCAGCCAATACTCTTCTTGTATAGATATTAGTAGTATATG 330469 Query 37190 GTTCAATGGACTCATTATTACTTAAT--ATTTGAGATGTAGATGCAGTAGGCATTGGTGC 37247 |||||| || |||||||| |||| |||| | ||| ||||| || ||||| || || Sbjct 330468 GTTCAAATGATTCATTATT--TTAAAGAATTTAACTTGTTGATGCTGTTGGCATAGGCGC 330411 Query 37248 TATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATC 37307 || | | |||||||| |||| | | |||| | | ||||| ||||||||| Sbjct 330410 AATCAATAAAGAATTTCTCATACCATATTTCATAATATTTTATTTTAAAGTATTCCAATC 330351 Query 37308 CCATAAATCTGTTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTG 37366 |||| | || | || | || |||||||| ||| || || |||| |||| Sbjct 330350 ATATAATTATG----GAACTACACCCCACATATCAAATTATAAGATTCCTTATGAGGCTG 330295 Query 37367 GAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA-GCTAGTTCGCAACTAGATTCT 37425 || | | | || ||||||||||| ||| ||||| | || ||| || | || Sbjct 330294 GACTTCCAGGAAAGGTTTCATAAGGTCC-TAATTTTTATGATAATTCT-AAGGATCTTTG 330237 Query 37426 AG-TGCGGCATAATATATTGTTTCGAAAATTTGTATA-TTTAATATTTTTGCTTCTTCGC 37483 | ||| ||||||| || || || || |||| || | |||||| | || || || Sbjct 330236 ACATGCTCCATAATAAATGGTCTCAAAGATTT-TAGAGTTTAATTCTAAGGCATCATCAG 330178 Query 37484 TATCGAATGCATAGCCCAATAATATA-AACACATCAGCCAAACCCTGAACACCGATACCT 37542 ||| |||| || || | || || |||| || || || | || || ||||| Sbjct 330177 AATCAAATGG-TATTTTCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCAATACCA 330119 Query 37543 ATGGGTCTATGTTTCTTATTAGATCTAGAC-GATTCTATCACTGGATAATAATTGATATC 37601 || ||||||| | | |||||| | || | | || | | || | |||| |||| | ||| Sbjct 330118 ATTGGTCTATTTCTTTTATTAC-TATATTCTGCTTGTTTAACAGAATAAAAATTCAAATC 330060 Query 37602 TATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACAT 37661 || | | |||||| |||| | | |||||| ||||| | || || ||||| Sbjct 330059 AATAACTATATTTAAATTTGTTGTAATTATTTTAGTAATCTCTAATAATTTCTCGAAATC 330000 Query 37662 AAATACGTTATTAT---TAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGC 37718 |||| |||| || | | || || ||| |||| | |||||||| ||||| Sbjct 329999 AAATGTTTTATCATCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTACAAACAGC 329940 Query 37719 AACTTCATCTTCGTTAC-TAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTG 37777 || ||||||| || | |||||| ||||| || || || | ||| || | | || | Sbjct 329939 AATTTCATCTG-GTGATGTAAATTAAATAATTTCAGTGCATAAATTGCTACTTTTGATAG 329881 Query 37778 TTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCG 37837 |||| | ||| ||| ||| ||| |||||| | ||||||||||| ||||| || Sbjct 329880 TTCCAAGATTCTTTTAATTACTCTTTGAATTACATGCATCTTTATATAACATATAAGGTA 329821 Query 37838 TTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCG 37897 ||| | |||||||| || || || || |||||| ||| ||||| | | Sbjct 329820 ATCCAGTTGAAATTTGAGCATCTATTATTTCTTACCATAATTATCTAGCTTTCATAGTTA 329761 Query 37898 CTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA 37957 || || | || || | || || || |||| |||| || || | ||| || | Sbjct 329760 CTCTACCCATATTTTTAGACTCATACTCAGTATACAATTAATTGAATT-ATTGTCCATAA 329702 Query 37958 CA-TCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCT 38016 || || | | ||| |||||||| ||||||||| | || ||| |||| || | || Sbjct 329701 CAATCTTAAAGTCCAGGACATTCATTTGGACACATCAAAGTCCAGTCTTAGTCATCTTTA 329642 Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076 || | || ||| |||||||| || | ||| || | |||||||||| | | ||| ||| Sbjct 329641 ACTCTTTACATGAATAAATCTGGGATCCACAAACCTAAAAATAAATCTCTTGCTCTTTAT 329582 Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAA-AATCGAATA-TATCAGCGTGCCATG 38134 ||||| | || ||||||||| || ||| || || | ||| | ||| ||||||| Sbjct 329581 TCTTCTATTCCATGATTCTTTCTCAA--TTATAAGAAACTTATAATGTCACTATGCCATG 329524 Query 38135 GTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAA 38194 |||| | ||| || | | | ||| ||| ||| ||||||| | || | ||||||| Sbjct 329523 GTTCCAAATAGATAGCAAAAGAACCTTTTCTCTTACCACCTCCTTAATCTACATATCTAG 329464 Query 38195 CTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGG 38254 |||||| |||| | | ||||||| || |||| ||||||| | | || || | || Sbjct 329463 CTGTGTCATTAAACACCTTTAACATTGGCACTAAACCATTACTTATTCCATTAGTTCCTC 329404 Query 38255 ATATATAAGTACCCTTAGCTCGTATATTACTTATCGAC--AATCCTATTCCACCTGCATG 38312 |||||| || | | || || || || | || || |||||||| || || || Sbjct 329403 TGATATAACTATCTTAAGATCTGATCTT--TGATACACTTAATCCTATCCCTCCAGCCGA 329346 Query 38313 TTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTT 38372 ||| ||||||||| ||| || | || ||| ||||||| ||||| ||||| Sbjct 329345 TTTACTTATTAAAGCACATCTCTTCAGAGTTTCATATATACCATCTATTGAATCATCAAC 329286 Query 38373 TATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGT 38432 || || | |||||| ||||||| ||| | ||||| || |||||||||||| Sbjct 329285 CATATCTAAAAGAAAACATGATGACATTTAAGGATAAGGAGTACCACTGTTAAATAATGT 329226 Query 38433 AGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATC 38492 |||| ||||| | || | |||| |||| ||| ||| |||| | || || Sbjct 329225 TGGAGTGGCATGAGTAAAATACTTTTATGACATTAAATGATAAGTTTAAAAGACTGATTC 329166 Query 38493 TATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552 | |||| | ||||| || | || ||||||| | | || |||||||||||| Sbjct 329165 CAAATCATCTTTATGAATTCCAATGCTAACTCTCATTAATAATTATTATGGTCTTTCTAT 329106 Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612 | ||| ||| | ||| |||| ||| | ||||||| || || | |||||| | Sbjct 329105 TGGTTTTTTACCATCTTTTAGTAAATAACTTCTTTCTAAAGTCTTAAAACCAAAAAAGTC 329046 Query 38613 ATATGAATAATCTCTATCGTATGCTATTACATTATCGATTATATCTCTATGTT 38665 |||| ||||||||| || || ||| | || | |||| ||||| ||| || Sbjct 329045 ATATTGATAATCTCTTTCATAGTTTATCTCTTTTTGGATTCTATCTTTATTTT 328993 >seq75 Length=370783 Score = 343 bits (380), Expect = 1e-89 Identities = 663/966 (69%), Gaps = 49/966 (5%) Strand=Plus/Plus Query 11279 AATTAAAAATCTATATCCGTAGAAAATATATTCTCTTCTTTATTTGTAAACACCCCCATC 11338 ||| ||||||| |||| ||| ||||| || |||| ||| || | | || || | | Sbjct 196113 AATCAAAAATCAGCATCCATAGTAAATACTTTATCTTATTTTTTACTCATTACTCC-AGC 196171 Query 11339 TTTTGA-TATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATAT-AT 11396 |||| | || || | |||| || |||||| |||||||| ||||||| | |||||| || Sbjct 196172 TTTTTAGTAATCTCCTACTCTTCTTTCGAAGAAATTAGTTTTACCTTACAATGATATCAT 196231 Query 11397 ACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTA 11456 | ||||| | ||||||||| | | |||| | | ||| |||||| | || Sbjct 196232 A-TCCATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCACCTAATGCAAATA 196290 Query 11457 ATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA 11516 || ||||||||| || ||||| ||||| | ||||||| | ||||||| || || | Sbjct 196291 TTAGTCTATCTGCAACAAATTCAATATATTATTTCATTAAATTAGAATTCATTCCAATTA 196350 Query 11517 GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTA 11576 || || || | ||| | | | ||| || ||||| || | ||| || ||||| | Sbjct 196351 ATTCGACTGGTAAAGCTTCGCTTATAAATTCTTTTTCAATTTCAACTGCGG--ATGAT-A 196407 Query 11577 TCGACGTTATAACTTCCTTAGATGG-----TGGATGTAATAAATGTTTAAACATTAAACA 11631 | | | || | ||| || ||| | || || ||| ||||| | | | ||| Sbjct 196408 TA-ATTTCATGAATTCGTT-GATTACTCAATTTATTTACTAAGTGTTTGTAAAGAAGACA 196465 Query 11632 CGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCC 11691 ||||||||| ||| | |||||| ||||| |||| |||||| |||||||||| ||| Sbjct 196466 AGCAAAATCAGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTTAGTCC 196525 Query 11692 GGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATAT 11751 ||||||||| || ||||||||||| ||||| ||| |||||||||||||||||| || Sbjct 196526 TGGCATCAATGATCTCTTTTTTATCCAGAATATTGCACAAAATGAACCAGAAAAGAAAAT 196585 Query 11752 TCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGAT-ATCC 11810 || || || || ||||| || | || |||||| || || | || ||| | |||| Sbjct 196586 ACCTTCAACTGCAGCAAAAGCAATTAATCTTTCAGCAAATGAGTCATTT-TAGTTTATCC 196644 Query 11811 ATTTTCTGGCCCAATCAGCTTTCTTTTTTACG-CATTC-CATTGTTTCTATAGCGTTAAA 11868 |||| | ||||| |||||||||| || || | |||| | | ||||| | || Sbjct 196645 ATTTCATAGCCCACATTGCTTTCTTTTATATAACAGGCACATTAT--CAATAGCATGAAG 196702 Query 11869 TAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTC 11928 | | ||||||| | | ||| | | ||| ||||| ||||| | || |||| Sbjct 196703 AAGGTAATTTTTTTCATTTTCATCAGTAATATAAGTATCAATTAAAAGTGAGTAAGTTTC 196762 Query 11929 TGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTG 11988 ||| |||||||||||||| ||||||| ||||||||| ||||||| ||| |||| | || Sbjct 196763 TGAGTGAATATTTTCCATTGCTATTTAAAATCCATAAAAACATCTTGCTTCTGGAACTTG 196822 Query 11989 TACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAA 12048 || || | | ||| || || ||||| ||||| ||||| |||||||| | |||||| Sbjct 196823 AACTTCAGTACAGAATTATTAAGCCAAATTTTCATTCACAATGCCATCACTTGCTGCAAA 196882 Query 12049 AAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATC 12108 || || || | || |||||||||| |||||| ||| |||| ||| |||||||| | Sbjct 196883 GAAAGCAAGCACATACTTTATAAAGTGTTTTTCATCTGCTGTTAGTTTTTCCCAATCTTT 196942 Query 12109 TAAATCTT----TTGAT------------------------AAATCTACTTCTTCAACGG 12140 |||||| | || || ||||||| |||||| | | Sbjct 196943 TAAATCCTAAAATTTATTAATTTACATATAATACCTAATACAAATCTATCTCTTCAGCTG 197002 Query 12141 TCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGA 12200 ||||||||||||| || ||||||||| ||||| ||||||| ||| || ||||| | Sbjct 197003 TCCAAAAACTTGCTTTATGTTATTTATACATATTCCAAATATCATTATATTTTATAGGAA 197062 Query 12201 A-AATA 12205 | |||| Sbjct 197063 ACAATA 197068 >seq80 Length=351589 Score = 302 bits (334), Expect = 4e-77 Identities = 655/972 (67%), Gaps = 45/972 (5%) Strand=Plus/Minus Query 11279 AATTAAAAATCTATATCCGTAGAAAATATATTCTCTTCTTTATTTGTAAACACCCCCATC 11338 ||| ||||||| |||| ||| ||||| || |||| ||| || | | || || Sbjct 175369 AATCAAAAATCAGCATCCATAGTAAATACTTTATCTTGTTTTTTACTCATAACTCCAGCT 175310 Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATAT-ATA 11397 |||| ||| || | |||| || |||||| ||||| || ||||||| || ||||| ||| Sbjct 175309 TTTTAATAGTCTCCGACTCTTCTTTCGAAGAAATTTGTTTTACCTTATAAGGATATCATA 175250 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| | ||||||||| | | |||| | | ||| ||||| || Sbjct 175249 -TCCATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCTCCTAAAGAAAATAT 175191 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 |||||||||||| || ||||||||||| | ||||||| | ||||||| || || | Sbjct 175190 TAATCTATCTGCAACAAATTCTATATATTATTTCATTAAATTAGAATTCATTCCGATTAA 175131 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577 || || || | ||| | | | ||| || ||||| || | ||| || |||| | Sbjct 175130 TTCAACTGGTAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGC-----TGATGAA 175076 Query 11578 CGACGTTA-TAACTTCCTTAGATGGTGGATGTAATAA----ATGTTTAAACATTAAACAC 11632 | ||| | | ||| || | | || || ||| ||||||| | | | ||| Sbjct 175075 ATAATTTAATGAATTCGTTGATTACTCAATTTATTAATCATATGTTTATATAGGAGACAA 175016 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 ||||||||| || | ||||| ||||| ||| |||||||| ||||| || | ||| Sbjct 175015 GCAAAATCAGTGTGAAGTCCTTCATCTCTTGATATAAGTTCATTTGAAAAGGTAAGTCCA 174956 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 ||||| ||| || |||||| |||||||| || ||| |||||||||||||||||| || Sbjct 174955 GGCATTAATGATCTTTTTTTGATCCAAAAAATGGCACAAAATGAACCAGAAAAGAAGATG 174896 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATA-TCCA 11811 || || ||||| ||||| || | || |||||| || || | || ||| || |||| Sbjct 174895 CCTTCAACAGCAGCAAAAGCGATTAATCTTTCAGCAAATGAATCATT-CTAATTAATCCA 174837 Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACG-CATTC-CATTGTTTCTATAGCGTTAAAT 11869 || | ||||| ||||| |||| || || |||||| | ||||| | | Sbjct 174836 CTTCATTGCCCACATTGCTTTTTTTTGTATAACAGGAACATTGT--CAATAGCATGTAGA 174779 Query 11870 AAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929 | || ||||||| | | ||| ||| || || || || || | | ||| ||||| Sbjct 174778 AGATAATTTTTTTCATTTTCATCAGTTATGTAAGTGTCAATCAAAAGAGAATAAGTTTCT 174719 Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989 ||||| ||||| ||||||||||||| |||||||| ||||||| || |||| | || Sbjct 174718 GAATGTATATTCTCCATAGCTATTTAGAATCCATAAAAACATCTGGCTTCTGGAATTTGA 174659 Query 11990 ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAA 12049 || || | ||||| | |||| || |||||||||||||||||||| | |||||| Sbjct 174658 ACTTCAGTACAAAATTACTAAGCTAGGTTTTCATTTACAATACCATCACTTGCTGCAAAG 174599 Query 12050 AATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCAT-- 12107 || || || | || |||||||| | |||||||||| ||| | || |||||||| | Sbjct 174598 AAAGCAAGGACATACTTTATAAAATGTTTTTCGTCTGCAGTGAGCTTTTCCCAATCTTTA 174539 Query 12108 -----CTAAA----TCTTTTGATAAAT-CTAC---------------TTCTTCAACGGTC 12142 ||||| | || | |||||| |||| |||||| | ||| Sbjct 174538 AGATCCTAAAATTTTATTATTATAAATACTACCTAATATAAATCGATCTCTTCAGCTGTC 174479 Query 12143 CAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAA 12202 ||||| ||||| | ||||||||| |||||||| |||| || || || ||||| Sbjct 174478 CAAAAGCTTGCTTTGTGCTATTTATACATATTCCAGATGTCATTGTATTTGATTGGGAAG 174419 Query 12203 ATAACGAACCTA 12214 | ||| || ||| Sbjct 174418 AGAACAAATCTA 174407 >seq142 Length=220426 Score = 96.9 bits (106), Expect = 3e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 55907 ATTGTAGAGTTTTGTGAATATATAGCAAATAAAGGAAAAATTGTTATCGTTGCTGCATTA 55966 ||||| |||||| |||| | || |||||| |||||||||||| || ||||| || || Sbjct 110164 ATTGTCGAGTTTAGTGAGAAGATGGCAAATTTAGGAAAAATTGTAATTGTTGCAGCTCTA 110105 Query 55967 GATGGAACATATGAACGTAAACCATTTGGTAATATTCTTAATCTT-ATACCATTATCGGA 56025 |||||||| | ||| | ||||| ||| ||||| |||||| ||| || |||||| | || Sbjct 110104 GATGGAACTTTTGATAGGAAACCTTTTCATAATA-TCTTAAACTTGATTCCATTAGCTGA 110046 Query 56026 AAAAGTTACTAAATTAA 56042 || | | || ||| ||| Sbjct 110045 AAGAATCACAAAACTAA 110029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521619887920