Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq21 136 3e-27 seq28 122 6e-23 seq25 113 3e-20 seq23 109 4e-19 seq56 107 1e-18 seq37 107 1e-18 seq143 104 2e-17 >seq21 Length=592296 Score = 136 bits (150), Expect = 3e-27 Identities = 182/250 (73%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||||||||| | ||| || ||||||| || |||||||| Sbjct 450419 CCACCTCTTAATCTCAAAACTAAATGTAAGGTTGATTCTTTTTAAATATTGTAATCTGAA 450360 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||||| |||||| || || | ||||| | || || || ||| Sbjct 450359 AGAGTTCTTCCATCTTCTAGTTGTTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGG 450300 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| || || |||| || ||| || ||| || ||||| || ||||| Sbjct 450299 ATTCCTTCCTTATCTTAAATCTTAGCT-TTAACAGCGTCAATGGTGTCTGATGGCTCTAC 450241 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375 ||| | || ||||| || || ||||| ||||| |||||||||| |||||| | | | Sbjct 450240 ATCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACATATT---ATTTTA 450184 Query 15376 AATTTTAATA 15385 |||||||||| Sbjct 450183 AATTTTAATA 450174 >seq28 Length=561789 Score = 122 bits (134), Expect = 6e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | ||| || |||||||| || || || ||||||| ||||| ||||| Sbjct 90771 CCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATGTTATAATCTGAA 90830 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||| ||||| || ||||| | ||||| | || || || ||| Sbjct 90831 AGAGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATCAATCTTTATTAATCAGGTGGG 90890 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| |||| ||||| ||| ||| || || ||||| || || Sbjct 90891 ATTCCTTCTTTGTCTTAAATCTTTGC-CTTAACAGCATCGATAGTATCAGATGGCTCAAC 90949 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| | || ||||| || ||||| || || || |||||||||| |||||| Sbjct 90950 ATCAAGTGTGATGGTCTTCCCTGTAAGGGTCTTAACAAAAATTTACATATT 91000 >seq25 Length=585425 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | ||| ||||||||||| || || || ||||||| ||||| ||||| Sbjct 450120 CCTCCTCTAAGTCTCAAAACTAAATGGAGAGTTGATTCTTTTTAGATGTTATAATCTGAA 450061 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| ||||| || ||||| | || || | || || || || Sbjct 450060 AGTGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGGG 450001 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| |||| ||||| ||| ||| || ||||| || || || Sbjct 450000 ATTCCTTCCTTGTCTTAAATCTTTGC-CTTAACAGCATCGATGGTGTCAGATGGCTCAAC 449942 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| | || ||||| || ||||| || ||||| |||||||||| |||||| Sbjct 449941 ATCAAGAGTGATGGTCTTGCCTGTGAGGGTTTTAACAAAAATTTACATATT 449891 >seq23 Length=588601 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| |||||||| || || || || || |||| ||||| || || Sbjct 76903 CCACCTCTTAATCTCAAAACTAAGTGGAGTGTTGATTCCTTTTAGATGTTATAGTCTGAA 76844 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| |||||||||||| ||| || || | || | | || || ||| ||| Sbjct 76843 AGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTATTAATCGGGTGGG 76784 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| | ||||| ||| || ||| || || ||||| ||| || Sbjct 76783 ATTCCTTCCTTGTCTTAGATTTTAGCT-TTAACAGCATCAATAGTATCAGATGGTTCAAC 76725 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| | ||||| || || ||||| || ||||| ||||| |||| |||| Sbjct 76724 ATCAAGAGTAATTGTCTTTCCTGTGAGTGTTTTAACAAAGATTTACATA 76676 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||||||||| || ||||| ||||| || || || |||| || || || || Sbjct 77132 GCCACCTCTCAATCTCAAGACTAAGTGAAGTGTTGATTCCTTTTAGATATTATAGTCTGA 77073 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| |||||||||||| ||| || || | || | | || || ||| ||| Sbjct 77072 GAGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTATTAATCGGGTGG 77013 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| | ||||| ||| || ||| || || ||||| ||| | Sbjct 77012 GATTCCTTCCTTGTCTTAGATTTTAGCT-TTAACAGCATCAATAGTATCAGATGGTTCAA 76954 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| | || || || || ||||| || || || || ||||||| ||| Sbjct 76953 CATCAAGAGTGATTGTCTTTCCTGTGAGTGTCTTGACGAAAATTTACAT 76905 >seq56 Length=425007 Score = 107 bits (118), Expect = 1e-18 Identities = 168/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| ||||| || || |||||||| ||||| || || Sbjct 240313 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGAA 240254 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 240253 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240194 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| || || ||||||| ||| || ||| || || || || ||| || Sbjct 240193 ATTCCTTCCTTATCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGTTCAAC 240135 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAAT 15373 ||| | || || || || ||||| || ||||| || ||||||| ||| ||| | ||| Sbjct 240134 ATCGAGAGTGATTGTCTTTCCTGTGAGTGTTTTAACGAAAATTTACATTTTTTATAAT 240077 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||||||| ||||| ||||| || || ||||||| ||||| || || Sbjct 240541 CCACCTCTCAATCTTAAGACTAAGTGAAGTGTTGATTCTTTTTAAATGTTATAGTCTGAA 240482 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | |||||||||| || || || | || | | || || || ||| Sbjct 240481 AGAGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240422 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 240421 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCATCAATTGTGTCTGATGGTTCAAC 240363 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || ||||| || || |||| || || |||||||||| ||| Sbjct 240362 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 240315 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 127586 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 127645 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 127646 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 127705 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 127706 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGTTCAAC 127764 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| | ||||| || || || || | ||||||||||| |||| |||| Sbjct 127765 ATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 127813 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||||||||| || ||||| || || || || ||||||| ||||| || || Sbjct 117015 GCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 116956 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 116955 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 116896 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| ||||||| ||| || ||| || || || || ||| | Sbjct 116895 GATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGTTCAA 116837 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| | ||||| || || || || | ||||||||||| |||| |||| Sbjct 116836 CATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 116787 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||||||||| || ||||| || || || || ||||||| ||||| || || Sbjct 131140 GCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 131081 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 131080 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 131021 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| ||||||| ||| || ||| || || || || ||| | Sbjct 131020 GATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGTTCAA 130962 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| | ||||| || || || || | ||||||||||| |||| |||| Sbjct 130961 CATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 130912 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 54580 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 54639 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 54640 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 54699 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 54700 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCAGATGGTTCAAC 54758 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || ||||| || || |||| || || || ||||||| ||| Sbjct 54759 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAAATTTACAT 54806 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 54808 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 54867 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 54868 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 54927 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 54928 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCAGATGGTTCAAC 54986 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || || || || || || | ||||||||||| |||| ||| Sbjct 54987 ATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACAT 55034 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 55840 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 55781 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 55780 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 55721 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 55720 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCAGATGGTTCAAC 55662 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || || || || || || | ||||||||||| |||| ||| Sbjct 55661 ATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACAT 55614 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| ||||| || || ||||||| ||||| || || Sbjct 240769 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 240710 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | |||||||||| || || || | || | | || || || ||| Sbjct 240709 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240650 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| || || ||||||| ||| || ||| || || || || ||| || Sbjct 240649 ATTCCTTCCTTATCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGTTCAAC 240591 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || ||||| || || |||| || || || ||||||| ||| Sbjct 240590 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAAATTTACAT 240543 >seq37 Length=526299 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || ||||| || ||||||| ||||| || || Sbjct 197467 CCACCTCTCAATCTCAAAACTAAGTGGAGGGTTGATTCTTTTTAAATGTTATAGTCTGAA 197408 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 197407 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 197348 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 197347 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAAC 197289 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| | || || || || || || | ||||||||||| |||||||| || Sbjct 197288 ATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 197238 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 191458 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 191399 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 191398 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 191339 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 191338 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAAC 191280 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| | || || || || || || | ||||||||||| |||||||| || Sbjct 191279 ATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 191229 Score = 104 bits (114), Expect = 2e-17 Identities = 171/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 195151 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 195092 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 195091 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 195032 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 195031 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAAC 194973 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCA--TATTTGAAAAT 15373 ||| | || || || || || || | ||||||||||| ||||||| | ||| ||||| Sbjct 194972 ATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTCTTTTAAAAT 194913 Query 15374 AAA 15376 || Sbjct 194912 TAA 194910 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 197695 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 197636 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 197635 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 197576 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || || || || ||| || Sbjct 197575 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAAC 197517 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || ||||| || || |||| || || |||||||||| ||| Sbjct 197516 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 197469 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||| ||||| |||||||| || || || || ||||||| ||||| || || Sbjct 195380 GCCACCTCTTAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 195321 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 195320 AAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 195261 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| ||||||| ||| || ||| || || || || ||| | Sbjct 195260 GATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAA 195202 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| | || ||||| || || |||| || || |||||||||| ||| Sbjct 195201 CATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 195153 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| |||||||| || || || || ||||||| ||||| || || Sbjct 191687 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 191628 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 191627 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 191568 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| ||||||| ||| || ||| || | || || ||| || Sbjct 191567 ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGACTGTGTCTGATGGTTCAAC 191509 Query 15316 ATCTAAGGTAATGGT-TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| | || ||||| || || |||| || || |||||||||| ||| Sbjct 191508 ATCAAGAGTGATGGTACTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 191460 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||| ||||| ||||||| || || || || ||||||| ||||| || || Sbjct 197923 GCCACCTCTTAATCTCAAAACTAG-TGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 197865 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 197864 AAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 197805 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| ||||||| ||| || ||| || || || || ||| | Sbjct 197804 GATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAA 197746 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| | || ||||| || || |||| || || |||||||||| ||| Sbjct 197745 CATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 197697 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||||||||| ||||| |||||||| || || || || ||||||| ||||| || || Sbjct 196732 GCCACCTCTTAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 196673 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || |||| | ||||||||||| || || || | || | | || || || ||| Sbjct 196672 AAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 196613 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||| ||||| ||||||| ||| || ||| || || || || ||| | Sbjct 196612 -ATTCCTTCCTTGTCTTAAATTTTAGCT-TTGACAGCGTCGATTGTGTCTGATGGTTCAA 196555 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| | || ||||| || || |||| || || | ||||||| ||| Sbjct 196554 CATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAAACAAAATTTACAT 196506 >seq143 Length=219650 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| |||||||||||||||||||| || || |||| || || || || Sbjct 171910 CCTCCTCTCAACCTTAAAACTAAATGAAGGGTTGATTCCTTTTAGATATTATAGTCTGAA 171851 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | |||||||||| ||| || || | || | | || | || ||| Sbjct 171850 AGAGTTCTTCCATCTTCTAATTATTTCCCTGCAAAAATAAGCCTTTACTAATCAGGTGGT 171791 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| ||||||| ||| || ||| || || || || || || Sbjct 171790 ATTCCTTCTTTGTCTTAAATTTTAGCT-TTGACAGCGTCAATTGTGTCTGATGGCTCGAC 171732 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| | || || ||||| || || | || || ||||||||||||||| Sbjct 171731 ATCAAGTGTGATTGTTTTTCCAGTTAAGGTCTTGACAAAAATTTGCATA 171683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176803165963