Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq75 250 6e-61 seq80 224 2e-53 seq21 163 7e-35 seq37 159 8e-34 seq56 150 4e-31 seq28 147 5e-30 seq143 138 3e-27 seq25 136 9e-27 seq23 118 2e-21 seq46 95.1 3e-14 seq19 95.1 3e-14 >seq75 Length=370783 Score = 250 bits (276), Expect = 6e-61 Identities = 568/842 (67%), Gaps = 13/842 (2%) Strand=Plus/Minus Query 268795 TTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATAT 268854 ||| || |||| ||||||| |||| ||| | |||| |||| | |||||| ||| | Sbjct 196952 TTAGGATTTAAAAGATTGGGAAAAACTAACAGCAGATGAAAAACACTTTATAAAGTATGT 196893 Query 268855 TCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTG 268914 ||||| || ||||||| |||||||| || || || |||||| | | | | ||||| Sbjct 196892 GCTTGCTTTCTTTGCAGCAAGTGATGGCATTGTGAATGAAAATTTGGCTTAATAATTCTG 196833 Query 268915 TCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAA 268974 | || || || |||| ||||| ||||||||||| ||||| | ||||| || ||||| Sbjct 196832 TACTGAAGTTCAAGTTCCAGAAGCAAGATGTTTTTATGGATTTTAAATAGCAATGGAAAA 196773 Query 268975 TATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAA 269034 |||||| ||||| | ||| || ||||| ||||||||||| |||| | || ||||| Sbjct 196772 TATTCACTCAGAAACTTACTCACTTTTAATTGATACTTATATTACTGATGAAAATGAAAA 196713 Query 269035 GAAAAGACTATTTTC-TTCTA-TGAGAACTATGGACTGTGTGAGaaaa-aaaTCTGAATG 269091 ||| || | ||| | ||| ||| || | | | |||| | |||| ||| | || Sbjct 196712 -AAATTACCTTCTTCATGCTATTGATAA-TGT-GCCTGTTATATAAAAGAAAGCAATGTG 196656 Query 269092 GGCTCTGAAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGC 269151 |||| |||||||||||||| | | | | | | ||||| ||| |||||||||| || Sbjct 196655 GGCTATGAAATGGATAAACTAAAATGACTCATTTGCTGAAAGATTAATTGCTTTTGCTGC 196596 Query 269152 TGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGG 269211 || |||||||| |||||||| || || ||| || || || ||| | || || ||| Sbjct 196595 AGTTGAAGGTATTTTCTTTTCTGGTTCATTTTGTGCAATATTCTGGATAAAAAAGAGATC 196536 Query 269212 CCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTG 269271 | ||||||||| |||| || || || ||||| || || || |||||| | || Sbjct 196535 ATTGATGCCAGGACTAACATTTTCAAATGAATTAATTTCAAGAGATGAAGGTCTTCATAC 196476 Query 269272 CGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGT 269331 || || ||||| | || ||||| || | | | | ||| | | | || | Sbjct 196475 TGATTTTGCTTG--TCTTCTTTAC-AAACACTTAGTAAATAAATTGAGTAATCAACGAAT 196419 Query 269332 ATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATC 269391 | ||||||||| || || ||| | |||| ||||||| ||| |||||| || | Sbjct 196418 TCATGAAATTATATCATCCGCAGTTGAAATTGAAAAAGAATTTATAAGCGAAGCTTTACC 196359 Query 269392 TATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGA 269451 |||| | || || |||||| || | |||| | |||||||| | || || | || Sbjct 196358 AGTCGAATTAATTGGAATGAATTCTAATTTAATGAAATAATATATTGAATTTGTTGCAGA 196299 Query 269452 TAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAA--AATCCGTTTAGT 269509 |||| | | | | ||||| ||||| ||| || || || ||||| ||| Sbjct 196298 TAGACTAATATTTGCATTAGGTGCACCTAAAATATACAA--TTCAAAGAATCCTTTTGAA 196241 Query 269510 TTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAAC 269569 | ||||| | |||||||| ||||||| ||||||||||||| | | ||| | | Sbjct 196240 TGGATGGATATGATATCATTGTAAGGTAAAACTAATTTCTTCGAAAGAAGAGTAGGAGAT 196181 Query 269570 TATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTACAGATGCAGAA 269629 || | ||| || |||||| || ||| |||| || | || |||| ||||| || Sbjct 196180 TACTAAAAAGCTGGAGTAATGAGTAAAAAATAAGATAAAGTATTTACTATGGATGCTGAT 196121 Query 269630 TT 269631 || Sbjct 196120 TT 196119 >seq80 Length=351589 Score = 224 bits (248), Expect = 2e-53 Identities = 563/844 (67%), Gaps = 30/844 (4%) Strand=Plus/Plus Query 268801 CTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGC 268860 ||||| ||||||| |||| | | |||| |||| | |||||| ||| | ||||| Sbjct 174537 CTTAA-AGATTGGGAAAAGCTCACTGCAGACGAAAAACATTTTATAAAGTATGTCCTTGC 174595 Query 268861 GTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGA 268920 || ||||||| ||||||||||| || || ||||| |||| || | || ||| || Sbjct 174596 TTTCTTTGCAGCAAGTGATGGTATTGTAAATGAAAACCTAGCTTAGTAATTTTGTACTGA 174655 Query 268921 GGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCA 268980 || || ||||| ||||||||||||||||| |||||| | |||||||| || ||||| || Sbjct 174656 AGTTCAAATTCCAGAAGCCAGATGTTTTTATGGATTCTAAATAGCTATGGAGAATATACA 174715 Query 268981 TTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAG 269040 |||||| | || ||| || || || ||||| ||| |||| | || || |||| Sbjct 174716 TTCAGAAACTTATTCTCTTTTGATTGACACTTACATAACTGATGAAAATGA----AAAAA 174771 Query 269041 ACTATTTTCTTCTATGAGAACTATGGAC--TG----TGTGA---GaaaaaaaTCTGAATG 269091 | ||| |||| | ||| |||| ||| || ||| | ||||||| | || Sbjct 174772 ATTATCTTCTAC-ATG----CTATTGACAATGTTCCTGTTATACAAAAAAAAGCAATGTG 174826 Query 269092 GGCTCTGAAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGC 269151 ||| |||| ||||| || | | | | | | ||||| ||| | |||||||| || Sbjct 174827 GGCAATGAAGTGGATTAATTAGAATGATTCATTTGCTGAAAGATTAATCGCTTTTGCTGC 174886 Query 269152 TGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGG 269211 ||| ||||| || |||||||| || || ||| || || |||||| | || |||||| Sbjct 174887 TGTTGAAGGCATCTTCTTTTCTGGTTCATTTTGTGCCATTTTTTGGATCAAAAAAAGATC 174946 Query 269212 CCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGG--TTTACAC 269269 | ||||| ||| | || || || || ||| | ||| || || ||||| || |||| Sbjct 174947 ATTAATGCCTGGACTTACCTTTTCAAATGAACTTATATCAAGAGATGAAGGACTTCACAC 175006 Query 269270 TGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGA 269329 | || || |||||| | ||| || | ||| || | ||| | | | || Sbjct 175007 T--GATTTTGCTTGTCTCCTATATA-AACATATGATT--AATAAATTGAGTAATCAACGA 175061 Query 269330 GTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTA 269389 | | ||||||| ||||||||| | |||| ||||||| | | |||||| || Sbjct 175062 ATTCATTAAATTATTTCATCAGCTGTTGAAATTGAAAAAGAATTTATTAGTGAAGCTTTA 175121 Query 269390 TCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCT 269449 | | || | ||||| |||||| || | |||| | ||||||| | || || | Sbjct 175122 CCAGTTGAATTAATCGGAATGAATTCTAATTTAATGAAATAATATATAGAATTTGTTGCA 175181 Query 269450 GATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAA--AATCCGTTTA 269507 |||||||| | | |||||||| ||||| ||| || || || ||||| ||| Sbjct 175182 GATAGATTAATATTTTCTTTAGGAGCACCTAAAATATACAA--TTCAAAGAATCCTTTTG 175239 Query 269508 GTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTA 269567 | ||||| | ||||| ||| ||||||| | ||||||||||| | | || | Sbjct 175240 AATGGATGGATATGATATCCTTATAAGGTAAAACAAATTTCTTCGAAAGAAGAGTCGGAG 175299 Query 269568 ACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTACAGATGCAG 269627 ||||| | ||| || || ||| || ||| |||| || | || |||| ||||| | Sbjct 175300 ACTATTAAAAAGCTGGAGTTATGAGTAAAAAACAAGATAAAGTATTTACTATGGATGCTG 175359 Query 269628 AATT 269631 | || Sbjct 175360 ATTT 175363 >seq21 Length=592296 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| |||||| || |||||||| | |||||| || || || Sbjct 450419 CCACCTCTTAATCTCAAAACTAAATGTAAGGTTGATTCTTTTTAAATATTGTAATCTGAA 450360 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||||||||||||||| |||||||| | || | || |||||| || Sbjct 450359 AGAGTTCTTCCATCTTCTAGTTGTTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGG 450300 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| ||||| | |||||| ||||| ||| || | ||| || || ||||| Sbjct 450299 ATTCCTTCCTTATCTTAAATCTTAGCTTTAACAGCGTCAATGGTGTCTGATGGCTCTACA 450240 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || ||||| || || || ||||| ||||| || | ||| || Sbjct 450239 TCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACATATT 450190 >seq37 Length=526299 Score = 159 bits (176), Expect = 8e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | |||| || | || |||||||| | ||| |||||||| Sbjct 191461 ATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCT 191402 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| ||| ||||| |||||||| || || | || |||||| Sbjct 191401 GAAAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 191342 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| ||| || | || || ||||| Sbjct 191341 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCA 191282 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || |||||||| ||||| | ||||||||||||||| |||||||| Sbjct 191281 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 191229 Score = 159 bits (176), Expect = 8e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | |||| || | || |||||||| | ||| |||||||| Sbjct 197470 ATTCCACCTCTCAATCTCAAAACTAAGTGGAGGGTTGATTCTTTTTAAATGTTATAGTCT 197411 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| ||| ||||| |||||||| || || | || |||||| Sbjct 197410 GAAAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 197351 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| ||| || | || || ||||| Sbjct 197350 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCA 197291 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || |||||||| ||||| | ||||||||||||||| |||||||| Sbjct 197290 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 197238 Score = 158 bits (174), Expect = 3e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | |||| || | || |||||||| | ||| |||||||| Sbjct 195154 ATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCT 195095 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| ||| ||||| |||||||| || || | || |||||| Sbjct 195094 GAAAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 195035 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| ||| || | || || ||||| Sbjct 195034 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCA 194975 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 || || || || |||||||| ||||| | ||||||||||||||| ||||||| Sbjct 194974 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTT 194923 >seq56 Length=425007 Score = 150 bits (166), Expect = 4e-31 Identities = 176/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104325 TATTTA--TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 |||||| |||| ||||| | || | |||| || | || |||||||| | ||| || Sbjct 127576 TATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTT 127635 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 |||||| || || ||||| || ||||||| || ||||| |||||||| || || | || Sbjct 127636 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 127695 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 |||||| || |||||||| || || | ||| || ||||| ||| || | || || Sbjct 127696 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGA 127755 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||||||||| ||||| | ||||||||||||||| | ||| Sbjct 127756 TGGTTCAACATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACAT 127812 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | |||| || | || |||||||| | ||| |||||||| Sbjct 54805 ATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCT 54864 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| || ||||| |||||||| || || | || |||||| Sbjct 54865 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 54924 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| ||| || | || || ||||| Sbjct 54925 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCA 54984 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || |||||||| ||||| | ||||||||||||||| | |||| Sbjct 54985 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATT 55035 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | |||| || | || |||||||| | ||| |||||||| Sbjct 55843 ATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCT 55784 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| || ||||| |||||||| || || | || |||||| Sbjct 55783 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 55724 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| ||| || | || || ||||| Sbjct 55723 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCA 55664 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || |||||||| ||||| | ||||||||||||||| | |||| Sbjct 55663 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATT 55613 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| | ||| |||||||| || || ||||| || ||||||| || ||||| Sbjct 116984 GTTGATTCTTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCT 116925 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || || | || |||||| || |||||||| || || | ||| || ||||| Sbjct 116924 GCAAAAATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTG 116865 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||| || | || || ||||| || || || ||||||||||| ||||| | |||| Sbjct 116864 ACAGCGTCAATTGTGTCTGATGGTTCAACATCAAGAGTAATAGTCTTTCCAGTTAATGTT 116805 Query 104543 TTTACAAATATCTGCAT 104559 ||||||||||| | ||| Sbjct 116804 TTTACAAATATTTACAT 116788 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| | ||| |||||||| || || ||||| || ||||||| || ||||| Sbjct 131109 GTTGATTCTTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCT 131050 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || || | || |||||| || |||||||| || || | ||| || ||||| Sbjct 131049 GCAAAAATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTG 130990 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||| || | || || ||||| || || || ||||||||||| ||||| | |||| Sbjct 130989 ACAGCGTCAATTGTGTCTGATGGTTCAACATCAAGAGTAATAGTCTTTCCAGTTAATGTT 130930 Query 104543 TTTACAAATATCTGCAT 104559 ||||||||||| | ||| Sbjct 130929 TTTACAAATATTTACAT 130913 >seq28 Length=561789 Score = 147 bits (162), Expect = 5e-30 Identities = 179/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || | ||||| ||| | || |||||||| | || ||||| || || Sbjct 90771 CCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATGTTATAATCTGAA 90830 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||| | ||| |||||||||||||| | || | || |||||| || Sbjct 90831 AGAGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATCAATCTTTATTAATCAGGTGGG 90890 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 ||||||||||| || | ||||||||| || ||| || | ||||| || || || Sbjct 90891 ATTCCTTCTTTGTCTTAAATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCAACA 90950 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGTA 104572 || ||||| || ||||| || ||||| || || ||||| || | ||| || | | | || Sbjct 90951 TCAAGTGTGATGGTCTTCCCTGTAAGGGTCTTAACAAAAATTTACATATTATTTTAAATA 91010 Query 104573 TTTA 104576 |||| Sbjct 91011 TTTA 91014 >seq143 Length=219650 Score = 138 bits (152), Expect = 3e-27 Identities = 174/238 (73%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 104324 TTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATAT 104381 |||||| || || ||||| | ||| | |||| ||| | || ||||| || | |||| Sbjct 171921 TTATTTTCATACCTCCTCTCAACCTTAAAACTAAATGAAGGGTTGATTCCTTTTAGATAT 171862 Query 104382 TATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTT 104441 ||||||| || |||||||| || ||||||| || ||| || |||||||| ||||| | | Sbjct 171861 TATAGTCTGAAAGAGTTCTTCCATCTTCTAATTATTTCCCTGCAAAAATAAGCCTTTACT 171802 Query 104442 GATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGC 104501 |||||| |||||||||||||| || | ||| || ||||| ||| || | || || Sbjct 171801 AATCAGGTGGTATTCCTTCTTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTG 171742 Query 104502 TAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || || || ||||| | || || ||||| || ||||| Sbjct 171741 ATGGCTCGACATCAAGTGTGATTGTTTTTCCAGTTAAGGTCTTGACAAAAATTTGCAT 171684 >seq25 Length=585425 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || | |||| ||| | || |||||||| | || ||||| || || Sbjct 450120 CCTCCTCTAAGTCTCAAAACTAAATGGAGAGTTGATTCTTTTTAGATGTTATAATCTGAA 450061 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| || ||||| | ||| |||||||||||||||| || | || ||||||||| Sbjct 450060 AGTGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGGG 450001 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || || | ||||||||| || ||| || | ||| || || || || Sbjct 450000 ATTCCTTCCTTGTCTTAAATCTTTGCCTTAACAGCATCGATGGTGTCAGATGGCTCAACA 449941 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || ||||| || || || ||||| ||||| || | ||| || Sbjct 449940 TCAAGAGTGATGGTCTTGCCTGTGAGGGTTTTAACAAAAATTTACATATT 449891 >seq23 Length=588601 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || | |||| || | ||| ||||| || | ||||||||||| || Sbjct 77131 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTTGATTCCTTTTAGATATTATAGTCTGAG 77072 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| |||||||||| || |||||| ||||| || || || | || ||| || || Sbjct 77071 AGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTATTAATCGGGTGGG 77012 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || || | || || ||||| ||| || | ||||| ||||| || Sbjct 77011 ATTCCTTCCTTGTCTTAGATTTTAGCTTTAACAGCATCAATAGTATCAGATGGTTCAACA 76952 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || ||||| || || ||||| || || || || | |||| Sbjct 76951 TCAAGAGTGATTGTCTTTCCTGTGAGTGTCTTGACGAAAATTTACATT 76904 >seq46 Length=482232 Score = 95.1 bits (104), Expect = 3e-14 Identities = 124/169 (73%), Gaps = 11/169 (7%) Strand=Plus/Minus Query 70094 TCTTCGTCGTAACAACCCATTAAAAAACTAG-ATAATAATCCAGATTTATTACCTTTTCC 70152 ||||| | |||||| ||| |||| ||||| |||| ||||| | | || ||| |||| Sbjct 122414 TCTTCATTATAACAAGCCAATAAATAACTACCATAA-AATCCTTTTCTTTTTCCTGTTCC 122356 Query 70153 ATAATAAGCTCCTAACACTAATAAATCGGCTTTATCAGCCATACTTCCGTTATCTAAATA 70212 |||| |||| |||| || ||||||| |||||| || ||| ||||||||||| Sbjct 122355 ATAACAAGCGCCTATAGGTACTAAATCGAAGGTATCAGACAA---TCCATTATCTAAATA 122299 Query 70213 ATCtttttttatttttAACC------ATCTTCTCATACCAGGTTCATAT 70255 ||||||||||| |||||||| || |||| || | ||||||||| Sbjct 122298 ATCTTTTTTTAATTTTAACCAATTAAATGATCTCTTAGCTGGTTCATAT 122250 >seq19 Length=614858 Score = 95.1 bits (104), Expect = 3e-14 Identities = 210/312 (67%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 165024 AAATAAGAATAGTAGCTACTAAAAATGCTATTCATTTTATAGACCAGAAGGAAATAG-GA 165082 ||||||||||||| | ||| | ||||| | ||||| ||| ||||||| | Sbjct 324915 AAATAAGAATAGTTACAACTCATAATGCATAAAAATTTATGAACC---CTGAAATAGCAA 324971 Query 165083 ATACCTA--TTTATACCGATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTG 165140 ||| | || ||| || | ||||||| || |||||||| ||| | | ||||| | Sbjct 324972 ATATTGAACATTTTACTGACGAAGATGAATTTAAGACTTGGAAATAAAGAAATGATCCAG 325031 Query 165141 TTTTACATATAGAGCTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAA 165200 | || ||||| || |||||| |||||||||| | || || || || | |||| | Sbjct 325032 TATTGCATATTGAATTAAGAAAATGGGCAGATTGTTTTTTAATTGCTCCTCTTTCAGCTA 325091 Query 165201 ACAGTTTAGCGAAGATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAG 165260 | | | || || || |||| ||| | ||| | || |||||||| ||| | | ||| Sbjct 325092 ATACAATGGCAAAAATTACTAATGGTTTATGTGACAATTTGTTAACAAATATTGCTCGAG 325151 Query 165261 CGTGGAATATTAATAAACCTTTACTTTTCTGTCCAGCTATGAATACACTTATGTGGGAAC 165320 | ||| || |||||| ||| | |||| || || ||||||||| | |||| || Sbjct 325152 CATGGGATTATAATAAGCCTATGATTTTAGCACCTGCCATGAATACAATGATGTATGATA 325211 Query 165321 ATCCTATTACTG 165332 |||| || |||| Sbjct 325212 ATCCAATAACTG 325223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390389505444