Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq37 145 7e-30 seq56 127 2e-24 seq25 109 5e-19 seq28 89.7 5e-13 seq143 86.0 6e-12 >seq37 Length=526299 Score = 145 bits (160), Expect = 7e-30 Identities = 190/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 26741 TTATATAAGTACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 26800 |||||| | || |||| | || ||||||||| | ||||||||||||||||||||||| Sbjct 191208 TTATATTATTAATTTTAA----AAGAAAATGCAAATATTTGTAAAAACATTAACTGGAAA 191263 Query 26801 ATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTAC 26860 | ||||| | || | ||| || ||||| ||||| |||||| || ||| Sbjct 191264 GACTATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTTA 191323 Query 26861 CGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGA 26920 ||||| ||||| || || || ||| || |||||||||||| | || || ||| | || Sbjct 191324 AGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGA 191383 Query 26921 AGATGATAGAA-AC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||| |||| || ||| |||||||||||| |||||||||| ||| |||| | || Sbjct 191384 AGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTT 191441 Query 26979 CTGAGACTTAGAGGAGGAA 26997 ||||| | ||||| |||| Sbjct 191442 TTGAGATTGAGAGGTGGAA 191460 Score = 141 bits (156), Expect = 9e-29 Identities = 189/259 (73%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 26741 TTATATAAGTACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 26800 |||||| | || |||| ||| |||||||| | ||||||||||||||||||||||| Sbjct 194902 TTATATTATTAATTTT-----AAAAGAAATGCAAATATTTGTAAAAACATTAACTGGAAA 194956 Query 26801 ATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTAC 26860 | ||||| | || | ||| || ||||| ||||| |||||| || ||| Sbjct 194957 GACTATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTTA 195016 Query 26861 CGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGA 26920 ||||| ||||| || || || ||| || |||||||||||| | || || ||| | || Sbjct 195017 AGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGA 195076 Query 26921 AGATGATAGAA-AC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||| |||| || ||| |||||||||||| |||||||||| ||| |||| | || Sbjct 195077 AGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTT 195134 Query 26979 CTGAGACTTAGAGGAGGAA 26997 ||||| | ||||| |||| Sbjct 195135 TTGAGATTGAGAGGTGGAA 195153 Score = 141 bits (156), Expect = 9e-29 Identities = 189/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 26741 TTATATAAGTACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 26800 |||||| | || |||| | || ||||||||| | ||||||||||||||||||||||| Sbjct 197217 TTATATTATTAATTTTAA----AAGAAAATGCAAATATTTGTAAAAACATTAACTGGAAA 197272 Query 26801 ATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTAC 26860 | ||||| | || | ||| || ||||| ||||| |||||| || ||| Sbjct 197273 GACTATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTTA 197332 Query 26861 CGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGA 26920 ||||| ||||| || || || ||| || |||||||||||| | || || ||| | || Sbjct 197333 AGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGA 197392 Query 26921 AGATGATAGAA-AC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||| |||| || ||| |||||||||||| |||||||||| || |||| | || Sbjct 197393 AGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACCCTCCACTTAGTT 197450 Query 26979 CTGAGACTTAGAGGAGGAA 26997 ||||| | ||||| |||| Sbjct 197451 TTGAGATTGAGAGGTGGAA 197469 Score = 116 bits (128), Expect = 4e-21 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | ||||| || || || |||||||| | ||||| | || | ||| || Sbjct 197468 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 197527 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| |||||| || ||| ||||| ||||| || || || ||| | Sbjct 197528 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 197587 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || ||| | ||||||| |||| || ||| |||||| Sbjct 197588 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 197645 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| |||||||||| ||| |||| | || ||||| | ||||| |||| Sbjct 197646 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 197697 Score = 113 bits (124), Expect = 4e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | ||||| || || || |||||||| | ||||| | || | ||| || Sbjct 195152 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 195211 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| |||||| || ||| ||||| ||||| || || || ||| | Sbjct 195212 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 195271 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || ||| | ||||||| |||| || ||| |||||| Sbjct 195272 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 195329 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| | || ||||| | ||||| || Sbjct 195330 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 195379 Score = 113 bits (124), Expect = 4e-20 Identities = 166/230 (72%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | ||||| || || || |||||||| | ||||| | || | ||| || Sbjct 197696 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 197755 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| |||||| || ||| ||||| ||||| || || || ||| | Sbjct 197756 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 197815 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || ||| | ||||||| |||| || ||| |||||| Sbjct 197816 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 197873 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| || || ||||| | ||||| || Sbjct 197874 AACATTTAAAAAGAATCAACTCTCCA-CTAGTTTTGAGATTAAGAGGTGG 197922 Score = 109 bits (120), Expect = 5e-19 Identities = 167/233 (72%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAAT-CGATCACCATCGAATTAGAATCAA 26826 |||| || | ||||| || || || |||||||| | | ||||| | || | ||| || Sbjct 191459 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAACCAT 191518 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||||| |||| |||||| || ||| ||||| ||||| || || || ||| Sbjct 191519 CAGACACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 191578 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTA 26944 || |||||||||||| | || || ||| | ||||||| |||| || ||| ||||| Sbjct 191579 AATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTA 191636 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||| |||||||||| ||| |||| | || ||||| | ||||| |||| Sbjct 191637 TAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 191689 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || | || || || |||||||| | ||||| | || | ||| || Sbjct 196505 AATGTAAATTTTGTTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 196564 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| |||||| || ||| ||||| ||||| || || || ||| | Sbjct 196565 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAAT-CCACCTGATTA 196623 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || ||| | ||||||| |||| || ||| |||||| Sbjct 196624 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 196681 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| | || ||||| | ||||| || Sbjct 196682 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 196731 >seq56 Length=425007 Score = 127 bits (140), Expect = 2e-24 Identities = 173/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| | |||| || | ||||||||||||||||||||||| | ||||| | || | || Sbjct 55041 AAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGA 54982 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | || ||||| || || |||||| || ||| ||||| ||||| || || || Sbjct 54981 ACCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACC 54922 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGC 26939 ||| || |||||||||||| | || || || | ||||||| |||| || | ||| Sbjct 54921 TGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG- 54863 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||| |||||||||| ||| |||| | || ||||| | ||||| |||| Sbjct 54862 -ACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 54806 Score = 127 bits (140), Expect = 2e-24 Identities = 173/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| | |||| || | ||||||||||||||||||||||| | ||||| | || | || Sbjct 55607 AAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGA 55666 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | || ||||| || || |||||| || ||| ||||| ||||| || || || Sbjct 55667 ACCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACC 55726 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGC 26939 ||| || |||||||||||| | || || || | ||||||| |||| || ||| Sbjct 55727 TGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA-- 55784 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||||||| |||||||||| ||| |||| | || ||||| | ||||| |||| Sbjct 55785 GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 55842 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | ||||||||||||||||||||||| | || || | || | ||| || Sbjct 116788 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA 116847 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || |||||| || ||| ||||| ||||| || || || ||| || Sbjct 116848 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 116907 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTATA 26946 |||||||||||| | || || || | ||||||| |||| || ||| ||||||| Sbjct 116908 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTATA 116965 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||| ||| |||| | ||| ||||| | ||||| || Sbjct 116966 ACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 117014 Score = 120 bits (132), Expect = 3e-22 Identities = 173/240 (72%), Gaps = 7/240 (3%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | ||||||||||||||||||||||| | || || | || | ||| || Sbjct 127812 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA 127753 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || |||||| || ||| ||||| ||||| || || || ||| || Sbjct 127752 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 127693 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTATA 26946 |||||||||||| | || || || | ||||||| |||| || | ||| |||||| Sbjct 127692 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTATA 127635 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA---AAATAT 27003 ||||| |||||||||| ||| |||| | || ||||| | ||||| |||| |||||| Sbjct 127634 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATAT 127575 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | ||||||||||||||||||||||| | || || | || | ||| || Sbjct 130913 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA 130972 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || |||||| || ||| ||||| ||||| || || || ||| || Sbjct 130973 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 131032 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTATA 26946 |||||||||||| | || || || | ||||||| |||| || ||| ||||||| Sbjct 131033 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTATA 131090 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||| ||| |||| | ||| ||||| | ||||| || Sbjct 131091 ACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 131139 Score = 105 bits (116), Expect = 6e-18 Identities = 166/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| || | || || |||||| | || ||||| | ||||| |||| | ||| || Sbjct 240084 AAAATGTAAATTTTCGTTAAAACACTCACAGGAAAGACAATCACTCTCGATGTTGAACCA 240143 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| || || |||||| || ||| || || ||||| || || || ||| Sbjct 240144 TCAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGAT 240203 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACT 26943 || |||||||||||| | || || || | ||||||| |||| || ||| |||| Sbjct 240204 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACT 240261 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||||||||||| ||| | || | || ||||| | ||||| |||| Sbjct 240262 ATAACATTCAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAA 240315 Score = 104 bits (114), Expect = 2e-17 Identities = 170/241 (71%), Gaps = 7/241 (3%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || |||||||| | ||||| | || | ||| || Sbjct 54807 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 54748 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 54747 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 54688 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTAT 26945 | |||||||||||| | || || || | ||||||| |||| || | ||| ||||| Sbjct 54687 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 54630 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA---AAATA 27002 |||||| |||||||||| ||| |||| | || ||||| | ||||| |||| ||||| Sbjct 54629 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATA 54570 Query 27003 T 27003 | Sbjct 54569 T 54569 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || |||||||| | ||||| | || | ||| || Sbjct 127585 AATGTAAATATTCGTTAAGACCTTGACTGGAAAGACAATCACTCTTGACGTCGAACCATC 127526 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 127525 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127466 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTAT 26945 | |||||||||||| | || || || | ||||||| |||| || | ||| ||||| Sbjct 127465 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 127408 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| | ||| ||||| | ||||| || Sbjct 127407 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 127358 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || ||||| ||||||||| | ||||| | || | ||| || Sbjct 240770 AATGTAAATTTTCGTTAAGACATTGACTGGAAAAACAATCACTCTTGACGTCGAACCATC 240829 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 240830 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240889 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| || || || || | ||||||| |||| || ||| |||||| Sbjct 240890 ATAAAGACTCATTTTCGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 240947 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| || | || | ||| | ||| | ||||| || Sbjct 240948 AACATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTAAGAGGCGG 240997 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || |||||||| | ||||| | || | ||| || Sbjct 54579 AATGTAAATATTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 54520 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 54519 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 54460 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTAT 26945 | |||||||||||| | || || || | ||||||| |||| || | ||| ||||| Sbjct 54459 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 54402 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| | || ||||| | ||||| || Sbjct 54401 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 54352 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || |||||||| | ||||| | || | ||| || Sbjct 55841 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 55900 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 55901 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 55960 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || || | ||||||| |||| || ||| |||||| Sbjct 55961 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 56018 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||| ||| |||| | || ||||| | ||||| || Sbjct 56019 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 56068 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | ||||| || || || |||||||| | ||||| | || | ||| || Sbjct 240314 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 240373 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 240374 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240433 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 | |||||||||||| | || || || | ||||||| |||| | |||||||| Sbjct 240434 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 240493 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||| |||||||||| || | || | ||| | ||| | ||||| |||| Sbjct 240494 CATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAA 240543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || |||||||| | ||||| | || | ||| || Sbjct 240542 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 240601 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || |||||| || ||| || || ||||| || || || ||| | Sbjct 240602 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTA 240661 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 | |||||||||||| | || || || | ||||||| |||| || ||| |||||| Sbjct 240662 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 240719 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| |||||||||| ||| | || | || ||||| | ||||| |||| Sbjct 240720 AACATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAA 240771 >seq25 Length=585425 Score = 109 bits (120), Expect = 5e-19 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| || ||| || | ||||| ||||| | || || || | ||||| | || | || Sbjct 449887 AAATAATATGTAAATTTTTGTTAAAACCCTCACAGGCAAGACCATCACTCTTGATGTTGA 449946 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 || ||||||||||| || || ||||||| ||||| ||||| || ||||| Sbjct 449947 GCCATCTGACACCATCGATGCTGTTAAGGCAAAGATTTAAGACAAGGAAGGAATCCCTCC 450006 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGC 26939 ||| || ||||| | |||| | || || ||| | ||||||| |||| || ||| Sbjct 450007 TGATTAATAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACACTTTCA-- 450064 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || |||||||| |||||||||| ||| ||||| | || |||||||||||||||| Sbjct 450065 GATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTTTTGAGACTTAGAGGAGG 450120 >seq28 Length=561789 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 26852 AAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAA 26911 ||||||| ||||||||||| || || || ||| || ||||| | |||| | || || Sbjct 90914 AAAGATTTAAGACAAAGAAGGAATCCCACCTGATTAATAAAGATTGATTTTTGCTGGAAA 90855 Query 26912 ACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||| | ||||||| |||| | || |||||||| |||||||||| ||| |||| Sbjct 90854 GCAATTGGAAGATGGAAGAACTCTTTCAGATTATAACATCTAAAAAGAATCAACTCTCCA 90795 Query 26972 TCTGGTCCTGAGACTTAGAGGAGG 26995 | | || ||||||| |||||||| Sbjct 90794 TTTAGTATTGAGACTCAGAGGAGG 90771 >seq143 Length=219650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||||||| | ||||| | || | || || Sbjct 171684 ATGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTTGATGTCGAGCCATCA 171743 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || |||||| || ||| ||||||||||| ||||| || ||| | Sbjct 171744 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGAATACCACCTGATTAG 171803 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||| || |||| | || ||| || | ||||||| |||| | |||||||| Sbjct 171804 TAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACTCTTTCAGACTATAAT 171863 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || |||| ||||| || | ||| | || | || | |||||||| Sbjct 171864 ATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGAGG 171910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659151078960