Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq37 140 3e-28 seq56 123 2e-23 seq143 111 1e-19 seq25 109 5e-19 seq28 96.9 3e-15 >seq37 Length=526299 Score = 140 bits (154), Expect = 3e-28 Identities = 194/265 (73%), Gaps = 10/265 (4%) Strand=Plus/Plus Query 23963 TTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 24022 |||||| | || |||| | || ||||||||| | ||||||||||||||||||||||| Sbjct 191208 TTATATTATTAATTTTAA----AAGAAAATGCAAATATTTGTAAAAACATTAACTGGAAA 191263 Query 24023 ATCGATTACCATCGAAGTCGAGGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTA 24081 | || || | || || || ||| | ||||| ||||| |||||| || ||| Sbjct 191264 GACTATCACTCTTGATGTTGA-ACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTT 191322 Query 24082 CCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCG 24141 ||||| ||||| || || || ||| || | ||||| |||| | || |||||| | | Sbjct 191323 AAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAG 191382 Query 24142 AAGATGACAGAA-AC-GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| |||| || ||| || ||||||||| |||||||||| || | || ||||| Sbjct 191383 AAGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGT 191440 Query 24200 GTTAAGATTGAGAGGAGGACTATAA 24224 || ||||||||||| ||| | ||| Sbjct 191441 TTTGAGATTGAGAGGTGGAATGTAA 191465 Score = 140 bits (154), Expect = 3e-28 Identities = 194/265 (73%), Gaps = 10/265 (4%) Strand=Plus/Plus Query 23963 TTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 24022 |||||| | || |||| | || ||||||||| | ||||||||||||||||||||||| Sbjct 197217 TTATATTATTAATTTTAA----AAGAAAATGCAAATATTTGTAAAAACATTAACTGGAAA 197272 Query 24023 ATCGATTACCATCGAAGTCGAGGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTA 24081 | || || | || || || ||| | ||||| ||||| |||||| || ||| Sbjct 197273 GACTATCACTCTTGATGTTGA-ACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTT 197331 Query 24082 CCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCG 24141 ||||| ||||| || || || ||| || | ||||| |||| | || |||||| | | Sbjct 197332 AAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAG 197391 Query 24142 AAGATGACAGAA-AC-GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| |||| || ||| || ||||||||| |||||||||| || | || ||||| Sbjct 197392 AAGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACCCTCCACTTAGT 197449 Query 24200 GTTAAGATTGAGAGGAGGACTATAA 24224 || ||||||||||| ||| | ||| Sbjct 197450 TTTGAGATTGAGAGGTGGAATGTAA 197474 Score = 136 bits (150), Expect = 3e-27 Identities = 193/265 (73%), Gaps = 11/265 (4%) Strand=Plus/Plus Query 23963 TTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAA 24022 |||||| | || |||| ||| |||||||| | ||||||||||||||||||||||| Sbjct 194902 TTATATTATTAATTTT-----AAAAGAAATGCAAATATTTGTAAAAACATTAACTGGAAA 194956 Query 24023 ATCGATTACCATCGAAGTCGAGGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTA 24081 | || || | || || || ||| | ||||| ||||| |||||| || ||| Sbjct 194957 GACTATCACTCTTGATGTTGA-ACCATCAGACACAATCGACGCTGTCAAAGCTAAAATTT 195015 Query 24082 CCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCG 24141 ||||| ||||| || || || ||| || | ||||| |||| | || |||||| | | Sbjct 195016 AAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAG 195075 Query 24142 AAGATGACAGAA-AC-GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| |||| || ||| || ||||||||| |||||||||| || | || ||||| Sbjct 195076 AAGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGT 195133 Query 24200 GTTAAGATTGAGAGGAGGACTATAA 24224 || ||||||||||| ||| | ||| Sbjct 195134 TTTGAGATTGAGAGGTGGAATGTAA 195158 Score = 111 bits (122), Expect = 1e-19 Identities = 171/238 (72%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | ||||| || || || |||||||| | || || | || || || ||| Sbjct 197468 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 197526 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| ||||| |||||| || ||| ||||| ||||| || || || ||| Sbjct 197527 CAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 197586 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTA 24166 || | ||||| |||| | || |||||| | ||||||| |||| || | ||| | || Sbjct 197587 AATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAG--ACTA 197644 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 ||||||| |||||||||| || | || ||||| || ||||||||||| ||| | ||| Sbjct 197645 TAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAA 197702 Score = 104 bits (114), Expect = 2e-17 Identities = 171/239 (72%), Gaps = 7/239 (3%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAAT-CGATTACCATCGAAGTCGAGGCCA 24048 |||| || | ||||| || || || |||||||| | | || || | || || || ||| Sbjct 191459 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAA-CCA 191517 Query 24049 AC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||| |||| |||||| || ||| ||||| ||||| || || || ||| Sbjct 191518 TCAGACACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 191577 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATT 24165 || | ||||| |||| | || |||||| | ||||||| |||| || | ||| | | Sbjct 191578 TAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAG--ACT 191635 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||||| |||||||||| || | || ||||| || ||||||||||| ||| | ||| Sbjct 191636 ATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAA 191694 >seq56 Length=425007 Score = 123 bits (136), Expect = 2e-23 Identities = 179/246 (73%), Gaps = 9/246 (4%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||||||||||||||||||||| | ||||| | || || || ||| | Sbjct 116788 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGA-ACCATC 116846 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 116847 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 116906 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 | | ||||| |||| | || ||| || | ||||||| |||| || ||| || ||| Sbjct 116907 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 116964 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGA 24227 |||||| |||||||||| || | || ||||| || ||||||||||| || |||||| Sbjct 116965 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG---CTAATGA 117021 Query 24228 TTCTTC 24233 || ||| Sbjct 117022 TTTTTC 117027 Score = 123 bits (136), Expect = 2e-23 Identities = 177/243 (73%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||||||||||||||||||||| | ||||| | || || || ||| | Sbjct 127812 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 127754 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 127753 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127694 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTAT 24167 | | ||||| |||| | || ||| || | ||||||| |||| || | ||| | ||| Sbjct 127693 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 127636 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGA 24227 |||||| |||||||||| || | || ||||| || ||||||||||| ||| | ||| | Sbjct 127635 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATA 127576 Query 24228 TTC 24230 ||| Sbjct 127575 TTC 127573 Score = 123 bits (136), Expect = 2e-23 Identities = 179/246 (73%), Gaps = 9/246 (4%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||||||||||||||||||||| | ||||| | || || || ||| | Sbjct 130913 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGA-ACCATC 130971 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || |||||| || ||| ||||| ||||| || || || ||| | Sbjct 130972 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 131031 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 | | ||||| |||| | || ||| || | ||||||| |||| || ||| || ||| Sbjct 131032 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 131089 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGA 24227 |||||| |||||||||| || | || ||||| || ||||||||||| || |||||| Sbjct 131090 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG---CTAATGA 131146 Query 24228 TTCTTC 24233 || ||| Sbjct 131147 TTTTTC 131152 Score = 122 bits (134), Expect = 7e-23 Identities = 177/244 (73%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| | |||| || | ||||||||||||||||||||||| | || || | || || || Sbjct 55041 AAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGA 54982 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || |||||| || ||| ||||| ||||| || || | Sbjct 54981 A-CCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCAC 54923 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || | ||| Sbjct 54922 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 54863 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 | ||||||||| |||||||||| || | || ||||| || ||||||||||| ||| | Sbjct 54862 --ACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 54805 Query 24221 ATAA 24224 ||| Sbjct 54804 GTAA 54801 Score = 122 bits (134), Expect = 7e-23 Identities = 177/244 (73%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| | |||| || | ||||||||||||||||||||||| | || || | || || || Sbjct 55607 AAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGA 55666 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || |||||| || ||| ||||| ||||| || || | Sbjct 55667 -ACCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCAC 55725 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || ||| Sbjct 55726 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA- 55784 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 || ||||||||| |||||||||| || | || ||||| || ||||||||||| ||| | Sbjct 55785 -GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 55843 Query 24221 ATAA 24224 ||| Sbjct 55844 GTAA 55847 Score = 113 bits (124), Expect = 4e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | ||||| || || || |||||||| | || || | || || || ||| Sbjct 240314 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 240372 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| || || |||||| || ||| ||||| ||||| || || || ||| Sbjct 240373 CAGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 240432 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 || | ||||| |||| | || ||| || | ||||||| |||| | || |||| Sbjct 240433 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATA 240492 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 ||||| |||||||||| ||| |||| ||||| |||||||||||||| ||| | ||| Sbjct 240493 ACATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAATGTAA 240548 Score = 109 bits (120), Expect = 5e-19 Identities = 172/240 (72%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||| || | || || |||||| | || ||||| | || || |||| || || || Sbjct 240084 AAAATGTAAATTTTCGTTAAAACACTCACAGGAAAGACAATCACTCTCGATGTTGAA-CC 240142 Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | | ||||| || || |||||| || ||| || || ||||| || || || || Sbjct 240143 ATCAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGA 240202 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGAT 24164 | || | ||||| |||| | || ||| || | ||||||| |||| || | ||| | Sbjct 240203 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--AC 240260 Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||||||||||||||||| || |||| ||||| || ||||||||||| ||| | ||| Sbjct 240261 TATAACATTCAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAATGTAA 240320 Score = 102 bits (112), Expect = 7e-17 Identities = 175/247 (71%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | || || || || || |||||||| | || || | || ||||| ||| Sbjct 127585 AATGTAAATATTCGTTAAGACCTTGACTGGAAAGACAATCACTCTTGACGTCGAA-CCAT 127527 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| || || |||||| || ||| ||||| ||||| || || || ||| Sbjct 127526 CAGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 127467 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTA 24166 || | ||||| |||| | || ||| || | ||||||| |||| || | ||| | || Sbjct 127466 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTA 127409 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATG 24226 ||||||| |||||||||| || | || ||||| || ||||||||||| || ||||| Sbjct 127408 TAACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG---CTAATG 127352 Query 24227 ATTCTTC 24233 ||| ||| Sbjct 127351 ATTTTTC 127345 Score = 98.7 bits (108), Expect = 9e-16 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | || || || || || |||||||| | || || | || || || ||| Sbjct 54807 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 54749 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| || || |||||| || ||| ||||| ||||| || || || ||| Sbjct 54748 CTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 54689 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTA 24166 || | ||||| |||| | || ||| || | ||||||| |||| || | ||| | || Sbjct 54688 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTA 54631 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATG 24226 ||||||| |||||||||| || | || ||||| || ||||||||||| ||| | ||| Sbjct 54630 TAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAAT 54571 Query 24227 ATTC 24230 |||| Sbjct 54570 ATTC 54567 Score = 96.9 bits (106), Expect = 3e-15 Identities = 168/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | || || || || || |||||||| | || || | || || || ||| Sbjct 240542 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 240600 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| || || |||||| || ||| || || ||||| || || || ||| Sbjct 240601 CAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATT 240660 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTA 24166 || | ||||| |||| | || ||| || | ||||||| |||| || | ||| | || Sbjct 240661 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTA 240718 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 ||||||| |||||||||| || |||| ||||| || ||||||||||| ||| | ||| Sbjct 240719 TAACATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAATGTAA 240776 >seq143 Length=219650 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || |||||||||||| | || || | || ||||| |||| | Sbjct 171684 ATGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTTGATGTCGA-GCCATC 171742 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || |||||| || ||| ||||||||||| ||||| || ||| | Sbjct 171743 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGAATACCACCTGATTA 171802 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 | || || |||| | || || || | ||||||| |||| | || ||||| Sbjct 171803 GTAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 171862 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || |||| ||||| || |||||||||| ||||| ||||||||||| Sbjct 171863 TATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGAGG 171910 >seq25 Length=585425 Score = 109 bits (120), Expect = 5e-19 Identities = 170/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| || ||| || | ||||| ||||| | || || || | || || | || || || Sbjct 449887 AAATAATATGTAAATTTTTGTTAAAACCCTCACAGGCAAGACCATCACTCTTGATGTTGA 449946 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | ||| | ||||||||||| || || ||||||| ||||| ||||| || |||| Sbjct 449947 G-CCATCTGACACCATCGATGCTGTTAAGGCAAAGATTTAAGACAAGGAAGGAATCCCTC 450005 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAG 24160 | ||| || | ||| | |||| | || |||||| | ||||||| |||| || ||| Sbjct 450006 CTGATTAATAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACACTTTCA- 450064 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| |||||||||| || | |||||||| || ||| | |||||||| Sbjct 450065 -GATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTTTTGAGACTTAGAGGAGG 450120 >seq28 Length=561789 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| || ||| || | ||||| || || | || || || | || || | || || || Sbjct 91004 AAATAATATGTAAATTTTTGTTAAGACCCTTACAGGGAAGACCATCACACTTGATGTTGA 90945 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | ||| | || || ||||| || || ||||||| ||||||||||| || || | Sbjct 90944 G-CCATCTGATACTATCGATGCTGTTAAGGCAAAGATTTAAGACAAAGAAGGAATCCCAC 90886 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | ||| || | ||| |||||| | || |||||| | ||||||| |||| | | Sbjct 90885 CTGATTAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACTCTTTCAG 90826 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||| |||||||||| || | |||||||| || ||| | |||||||| Sbjct 90825 ATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGACTCAGAGGAGG 90771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933154764165