Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq56 118 9e-22 seq37 98.7 8e-16 seq143 93.3 4e-14 seq25 89.7 4e-13 seq28 86.0 5e-12 >seq56 Length=425007 Score = 118 bits (130), Expect = 9e-22 Identities = 170/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 || ||||||| ||||||| || ||||| ||||| ||||| || || || |||| || Sbjct 240080 ATAAAAAATGTAAATTTTCGTTAAAACACTCACAGGAAAGACAATCACTCTCGATGTTGA 240139 Query 115339 GTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| | ||||| ||| || ||| |||||| ||||| ||||| |||| Sbjct 240140 A-CCATCAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCAC 240198 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||| | ||||||| |||| ||| || || |||||||||||| | ||| | | | Sbjct 240199 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 240258 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 | ||||||||||||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 240259 ACTATAACATTCAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAA 240315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| ||||||| || || || | || ||||| ||||| || | || || ||| Sbjct 240542 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 240600 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| ||||| ||||| |||| |||| Sbjct 240601 CAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATT 240660 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 240661 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 240720 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 240721 ACATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAA 240771 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||| |||| ||||| ||||| | || ||||| || ||||| | || || ||| | Sbjct 127812 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 127754 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| || ||| |||||| || || ||||| |||| |||| | Sbjct 127753 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127694 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| |||| ||| || || |||||||||||| | ||| | | || ||||| Sbjct 127693 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 127634 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 127633 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 127584 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| ||||||| || || || | || ||||| ||||| || | || || ||| Sbjct 54807 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 54749 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| || || ||||| |||| |||| Sbjct 54748 CTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 54689 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 54688 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 54629 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 54628 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 54578 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||| ||||| ||||| | || ||||| || || || | || || ||| Sbjct 55035 AATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CCAT 54977 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| || || ||||| |||| |||| Sbjct 54976 CTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 54917 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 54916 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 54857 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 54856 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 54806 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||| ||||| ||||| | || ||||| || || || | || || ||| Sbjct 55613 AATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CCAT 55671 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| || || ||||| |||| |||| Sbjct 55672 CTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 55731 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 55732 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 55791 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 55792 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 55842 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||| |||| ||||| ||||| | || ||||| || ||||| | || || ||| | Sbjct 116788 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 116846 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| || ||| |||||| || || ||||| |||| |||| | Sbjct 116847 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 116906 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| |||| ||| || || |||||||||||| | ||| | | || ||||| Sbjct 116907 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 116966 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| ||||||| || ||| | || | || ||||||||| |||| || Sbjct 116967 CATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 117014 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||| |||| ||||| ||||| | || ||||| || ||||| | || || ||| | Sbjct 130913 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 130971 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| || ||| |||||| || || ||||| |||| |||| | Sbjct 130972 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 131031 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| |||| ||| || || |||||||||||| | ||| | | || ||||| Sbjct 131032 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 131091 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| ||||||| || ||| | || | || ||||||||| |||| || Sbjct 131092 CATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 131139 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||||||||| || || | || ||||| ||||| || | || || ||| Sbjct 240314 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 240372 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| || || ||||| |||| |||| Sbjct 240373 CAGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 240432 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 240433 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATA 240492 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || || | || | || || |||||| |||| |||| Sbjct 240493 ACATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAA 240543 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| ||||||| || || || | || ||||| ||||| || | || || ||| Sbjct 55841 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 55899 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| |||||| || || ||||| |||| |||| Sbjct 55900 CTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 55959 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 55960 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 56019 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||||| || ||| | || | || |||||||| |||| || Sbjct 56020 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 56068 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 115370 AAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAA 115429 |||||| || || ||||| |||| |||| | ||||||| |||| ||| || || Sbjct 127500 AAAATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAG 127441 Query 115430 CAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACAT 115489 |||||||||||| | ||| | | || ||||||||| ||||||| || ||| | || Sbjct 127440 TAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCAC 127381 Query 115490 ATGGTGTTGAGATTGCGAGGAGG 115512 | || ||||||||| |||| || Sbjct 127380 TTAGTCTTGAGATTGAGAGGTGG 127358 >seq37 Length=526299 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| ||||| ||||| | || ||||| || || || | || || || Sbjct 191229 AAAATGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CC 191287 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | ||||| | | || ||| |||||| || || ||||| |||| ||| Sbjct 191288 ATCAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 191347 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || ||||||||||||| | ||| | | || || Sbjct 191348 TTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTA 191407 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 191408 TAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 191460 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||| ||||| ||||| | || ||||| || || || | || || ||| Sbjct 194923 AAATGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CCA 194981 Query 115344 GC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | ||||| | | || ||| |||||| || || ||||| |||| |||| Sbjct 194982 TCAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 195041 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 | ||||||| |||| ||| || || ||||||||||||| | ||| | | || ||| Sbjct 195042 TAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTAT 195101 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 195102 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 195153 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||||||||| || || | || ||||| ||||| || | || || ||| Sbjct 197468 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 197526 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| | | || ||| |||||| || || ||||| |||| |||| Sbjct 197527 CAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 197586 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || ||||||||||||| | ||| | | || |||| Sbjct 197587 AATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATA 197646 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 197647 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 197697 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAA-ACCATTACCGTCGAAACGGAGTCCA 115343 |||| |||||||||| || || | || ||||| ||||| || | || || ||| Sbjct 191459 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAA-CCA 191517 Query 115344 GC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | ||||| || | || ||| |||||| || || ||||| |||| |||| Sbjct 191518 TCAGACACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 191577 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 | ||||||| |||| ||| || || ||||||||||||| | ||| | | || ||| Sbjct 191578 TAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTAT 191637 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| ||||||| || ||| | || | || ||||||||| |||| |||| Sbjct 191638 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 191689 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| ||||| ||||| | || ||||| || || || | || || || Sbjct 197238 AAAATGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CC 197296 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | ||||| | | || ||| |||||| || || ||||| |||| ||| Sbjct 197297 ATCAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 197356 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || ||||||||||||| | ||| | | || || Sbjct 197357 TTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTA 197416 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| ||||||| || || | || | || ||||||||| |||| |||| Sbjct 197417 TAACATTTAAAAAGAATCAACCCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 197469 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||||||||| || || | || ||||| ||||| || | || || ||| Sbjct 195152 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCAT 195210 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| | | || ||| |||||| || || ||||| |||| |||| Sbjct 195211 CAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 195270 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || ||||||||||||| | ||| | | || |||| Sbjct 195271 AATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATA 195330 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||||| || ||| | || | || |||||||| |||| || Sbjct 195331 ACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 195379 >seq143 Length=219650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || | || |||||||| || || | || ||| ||| | Sbjct 171684 ATGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTTGATGTCGAG-CCATC 171742 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| || ||| |||||| || |||||||| | || |||| | Sbjct 171743 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGAATACCACCTGATTA 171802 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 | |||| ||||||| ||| || ||| |||||||||||| | ||| | | || ||||| Sbjct 171803 GTAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 171862 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||| || || || | ||| | || || || ||| ||||||| Sbjct 171863 TATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGAGG 171910 >seq25 Length=585425 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||| |||||||||| ||||| ||||| || || ||||| || | || ||| || Sbjct 449891 AATATGTAAATTTTTGTTAAAACCCTCACAGGCAAGACCATCACTCTTGATGTTGAG-CC 449949 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | ||||| | | || || ||| ||| || || ||||| |||| ||| Sbjct 449950 ATCTGACACCATCGATGCTGTTAAGGCAAAGATTTAAGACAAGGAAGGAATCCCTCCTGA 450009 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||| | |||| ||| || || ||||| ||||||| | ||| | | ||||| Sbjct 450010 TTAATAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACACTTTCAGATTA 450069 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||| || ||| | ||| | || |||||| | ||||||| Sbjct 450070 TAACATCTAAAAAGAATCAACTCTCCATTTAGTTTTGAGACTTAGAGGAGG 450120 >seq28 Length=561789 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||| |||||||||| || || || || || || ||||| || | || ||| || Sbjct 91000 AATATGTAAATTTTTGTTAAGACCCTTACAGGGAAGACCATCACACTTGATGTTGAG-CC 90942 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | || ||| | | || || ||| ||| || |||||||| |||| ||| Sbjct 90941 ATCTGATACTATCGATGCTGTTAAGGCAAAGATTTAAGACAAAGAAGGAATCCCACCTGA 90882 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||| | |||| ||| || || ||||| ||||||| | ||| | | ||||| Sbjct 90881 TTAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACTCTTTCAGATTA 90822 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||| || ||| | ||| | || |||||| | ||||||| Sbjct 90821 TAACATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGACTCAGAGGAGG 90771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341185153160