Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq75 398 1e-105 seq80 356 3e-93 seq4 282 5e-71 seq10 253 3e-62 seq165 82.4 1e-10 >seq75 Length=370783 Score = 398 bits (440), Expect = 1e-105 Identities = 643/929 (69%), Gaps = 32/929 (3%) Strand=Plus/Plus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 ||| ||||| ||||| ||| || || || | | ||||||| |||||||||||||||| Sbjct 196160 CATTACTCCAGCTTTTTAGTAATCTCCTACTCTTCTTTCGAAGAAATTAGTTTTACCTTA 196219 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 |||||||| | ||||| | || || ||||| | ||| || ||||| || Sbjct 196220 CAATGATATCATATCCATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCACC 196279 Query 32477 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 32536 ||| || | || | ||||||||| |||||||| |||||| |||||| | | | |||| Sbjct 196280 TAATGCAAATATTAGTCTATCTGCAACAAATTCAATATATTATTTCATTAAATTAGAATT 196339 Query 32537 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 32596 |||||| || | || ||||| | ||| | | | |||||||| |||||| || || Sbjct 196340 CATTCCAATTAATTCGACTGGTAAAGCTTCGCTTATAAATTCTTTTTCAATTTCAACTGC 196399 Query 32597 GTCTGTTATAATAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 32654 | || |||||| || | | | || | |||| | || | ||| ||||| | Sbjct 196400 GGATGATATAATT--TCATGAATTCGTTGATTACTCAATTTATTTACTAAGTGTTTGTAA 196457 Query 32655 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 32714 | | ||| || ||||| || ||||| || ||||| ||||||||| || ||||| Sbjct 196458 AGAAGACAAGCAAAATCAGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAAT 196517 Query 32715 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 32774 || ||||| ||||| | | |||||| | ||| ||||| | |||||| |||||| Sbjct 196518 GTTAGTCCTGGCATCAATGATCTCTTTTTTATCCAGAATATTGCACAAAATGAACCAGAA 196577 Query 32775 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA 32834 |||||||| ||||| ||||| ||||| ||||| | ||| || || | | | | | Sbjct 196578 AAGAAAATACCTTCAACTGCAGCAAAAGCAATTAATCTTTCAGCAAATGAGTCATTTTAG 196637 Query 32835 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 32894 | |||||| || |||||| || ||||||| || | ||||| | || |||||| Sbjct 196638 TTTATCCATTTCATAGCCCACATTGCTTTCTTTTATATAACAGGCACATTATCAATAGCA 196697 Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 | || || || ||||||||||| ||| ||| ||| |||||||| ||||| || Sbjct 196698 TGAAGAAGGTAATTTTTTTCATTTTCATCAGTAATATAAGTATCAATTAAAAGTGAGTAA 196757 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 |||| || ||||| ||||| || || |||| |||||| || || ||||| || || | | Sbjct 196758 GTTTCTGAGTGAATATTTTCCATTGCTATTTAAAATCCATAAAAACATCTTGCTTCTGGA 196817 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 | || ||||| ||||| ||| || || |||||||||||||| || || ||||| ||| Sbjct 196818 ACTTGAACTTCAGTACAGAATTATTAAGCCAAATTTTCATTCACAATGCCATCACTTGCT 196877 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 33134 ||||| || || | |||| |||||||| | |||||| |||| ||||||||| | |||| Sbjct 196878 GCAAAGAAAGCAAGCACATACTTTATAAAGTGTTTTTCATCTGCTGTTAGTTTTTCCCAA 196937 Query 33135 TCATTGATATC--------------TTTAGATAT--------------ATCCACTTCTTC 33166 || || | ||| |||| |||| ||| | ||||| Sbjct 196938 TCTTTTAAATCCTAAAATTTATTAATTTACATATAATACCTAATACAAATCTATCTCTTC 196997 Query 33167 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 33226 |||||||||| ||| | | ||||||||||||||| || |||| ||||| || Sbjct 196998 AGCTGTCCAAAAACTTGCTTTATGTTATTTATACATATTCCAAATATCATTATATTTTAT 197057 Query 33227 TGGAAAAATAACAAATCTATTTGGATTTT 33255 ||||| | ||||||||||||||||||| Sbjct 197058 AGGAAACAATACAAATCTATTTGGATTTT 197086 >seq80 Length=351589 Score = 356 bits (394), Expect = 3e-93 Identities = 633/927 (68%), Gaps = 31/927 (3%) Strand=Plus/Minus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 ||||||||| ||||| || || || || | | ||||||| ||||| |||||||||| Sbjct 175322 CATAACTCCAGCTTTTTAATAGTCTCCGACTCTTCTTTCGAAGAAATTTGTTTTACCTTA 175263 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 ||| ||||| | ||||| | || || ||||| | ||| || ||||| ||| Sbjct 175262 TAAGGATATCATATCCATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCTCC 175203 Query 32477 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 32536 || | | || ||||||||||| ||||||||||||||| |||||| | | | |||| Sbjct 175202 TAAAGAAAATATTAATCTATCTGCAACAAATTCTATATATTATTTCATTAAATTAGAATT 175143 Query 32537 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 32596 |||||| || | || |||||| | ||| || ||| |||||||| |||||| || || Sbjct 175142 CATTCCGATTAATTCAACTGGTAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGC 175083 Query 32597 GTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 32656 || ||||| | | | || | |||| | || | | ||||||| | | Sbjct 175082 TGATGAAATAATTTAATGAATTCGTTGATTACTCAATTTATTAATCATATGTTTATATAG 175023 Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 | ||| || ||||| ||| || || || ||||| || | ||| || ||||| || Sbjct 175022 GAGACAAGCAAAATCAGTGTGAAGTCCTTCATCTCTTGATATAAGTTCATTTGAAAAGGT 174963 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||||| ||||||| | ||||| | |||||| |||| |||||| |||||||| Sbjct 174962 AAGTCCAGGCATTAATGATCTTTTTTTGATCCAAAAAATGGCACAAAATGAACCAGAAAA 174903 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 32836 ||| || ||||| || || ||||| || || | ||| || || | | | | || Sbjct 174902 GAAGATGCCTTCAACAGCAGCAAAAGCGATTAATCTTTCAGCAAATGAATCATTCTAATT 174843 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG--CATTGTCTCTATAGCA 32894 |||||||| ||||| || || |||| || | ||| ||||||| |||||| Sbjct 174842 AATCCACTTCATTGCCCACATTGCTTTTTTTTGTATAACAGGAACATTGTCA--ATAGCA 174785 Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 | | ||||| ||||||||||| ||| | | || || |||||||||||| ||| Sbjct 174784 TGTAGAAGATAATTTTTTTCATTTTCATCAGTTATGTAAGTGTCAATCAAAAGAGAATAA 174725 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 |||| ||||| || || || || || |||| ||||| || || ||||| || || | | Sbjct 174724 GTTTCTGAATGTATATTCTCCATAGCTATTTAGAATCCATAAAAACATCTGGCTTCTGGA 174665 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || || ||||| ||||||||| | |||| |||||||| || || || ||||| ||| Sbjct 174664 ATTTGAACTTCAGTACAAAATTACTAAGCTAGGTTTTCATTTACAATACCATCACTTGCT 174605 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 33134 ||||| || || | |||| |||||||||| ||||||||||| || || || | |||| Sbjct 174604 GCAAAGAAAGCAAGGACATACTTTATAAAATGTTTTTCGTCTGCAGTGAGCTTTTCCCAA 174545 Query 33135 TCATTGATATC------TTT---------------------AGATATATCCACTTCTTCC 33167 || || | ||| ||| | ||| ||| | ||||| Sbjct 174544 TCTTTAAGATCCTAAAATTTTATTATTATAAATACTACCTAATATAAATCGATCTCTTCA 174485 Query 33168 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATT 33227 |||||||||| ||| | || ||||||||||||||||||||||| |||| ||| Sbjct 174484 GCTGTCCAAAAGCTTGCTTTGTGCTATTTATACATATTCCAGATGTCATTGTATTTGATT 174425 Query 33228 GGAAAAATAACAAATCTATTTGGATTT 33254 || || | ||||||||||||||| ||| Sbjct 174424 GGGAAGAGAACAAATCTATTTGGGTTT 174398 >seq4 Length=867223 Score = 282 bits (312), Expect = 5e-71 Identities = 976/1508 (65%), Gaps = 36/1508 (2%) Strand=Plus/Minus Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 |||||||||| ||||||||| | || || |||||| | ||||| ||||| | || ||| Sbjct 330514 AATTCTCCAGCCAATACTCTTCTTGTATAGATATTAGTAGTATATGGTTCAAATGATTCA 330455 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 |||||| | ||||| | |||||||| || |||||||| || | ||||||| |||| Sbjct 330454 TTATTTTAAAGAATTTAACTTGTTGATGCTGTTGGCATAGGCGCAATCAATAAAGAATTT 330395 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62377 || | ||| ||| | | || || | ||||| || | ||||| | | | | || Sbjct 330394 CTCATACCATATTTCATAATATTTTATTTTAAAGTATTCCAATCATATAATT---ATGGA 330338 Query 62378 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 62436 || || || || || || | ||| | || ||| | | || Sbjct 330337 ACTACACCCCACATATCAAATTATAAGATTCCTTATGAGGCTGGACT-TCCAGGAAAGGT 330279 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA-ATGCACCGTAATAAA 62495 || || |||||| || | | || ||| || | | | |||| || ||||||| Sbjct 330278 TTCATAAGGTCCTAATTTTTATGATAATTCT-AAGGATCTTTGACATGCTCCATAATAAA 330220 Query 62496 TGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTC--CAGGCTATCAAATGGATAATT 62553 |||| || ||||| || |||| ||| || || ||| ||||||||| || || Sbjct 330219 TGGTCTCAAAGATTTTAGAGTTTAATTCTAAGGCATCATCAGA--ATCAAATGG-TATTT 330163 Query 62554 TAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62612 | | || || || ||||| ||||||| || |||||||| || ||||||| ||| | Sbjct 330162 TCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCAATACCAATTGGTCTATTTCTTT 330103 Query 62613 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62672 ||||| ||| |||| | || || |||| |||| | ||| |||| | |||| | || Sbjct 330102 TATTACTATATTCTGCTTGTTTAACAGAATAAAAATTCAAATCAATAACTATATTTAAAT 330043 Query 62673 TTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---CATCTA 62729 || | ||||| ||| | || | ||| ||||||||| ||||| Sbjct 330042 TTGTTGTAATTATTTTAGTAATCTCTAATAATTTCTCGAAATCAAATGTTTTATCATCTT 329983 Query 62730 TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 62789 | | ||| | | ||| || | || ||||||||||| || | |||| | | Sbjct 329982 TGATTAACTTTTACAAATTAATACTAGCAAGATTACAAACAGCAATTTCATCTGGTGATG 329923 Query 62790 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 62849 | ||| || || |||||||| | ||| |||| ||||| ||||| | ||| | || || Sbjct 329922 TAAATTAAATAATTTCAGTGCATAAATTGCTACTTTTGATAGTTCCAAGATTCTTTTAAT 329863 Query 62850 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 62909 |||||||| ||||| ||||| ||||| | || | || |||||| ||| |||| Sbjct 329862 TACTCTTTGAATTACATGCATCTTTATATAACATATAAGGTAATCCAGTTGAAATTTGAG 329803 Query 62910 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT-TGTATCTCTTTTCT 62968 ||||| || ||| ||| | || ||| || || || | | || | | || | Sbjct 329802 CATCTATTATTTCTTACCATAATTATCTAGCTTTCAT---AGTTACTCTACCCATATTTT 329746 Query 62969 CTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 | ||| | ||||||||| | ||| | | ||| || || | ||||||| Sbjct 329745 TAGACTCATACTCAGTATACAATTAATTGAATTATTGTCCATAACAATCTTAAAGTCCAG 329686 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 ||||||||| ||||||||||| | ||| ||| |||||| || |||| || ||| || | Sbjct 329685 GACATTCATTTGGACACATCAAAGTCCAGTCTTAGTCATCTTTAACTCTTTACATGAATA 329626 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 ||| || ||||| | | ||| ||||| |||||| | ||| | ||| || |||| || Sbjct 329625 AATCTGGGATCCACAAACCTAAAAATAAATCTCTTGCTCTTTATTCTTCTATTCCATGAT 329566 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 ||||| | | | | ||| ||||| ||| |||||| |||||||| || || || | Sbjct 329565 TCTTTCTCAATTATAAGAAACTTATAATGTCACTATGCCATGGTTCCAAATAGATAGCAA 329506 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 | || | || ||||| | ||||| |||||||| |||| |||| | || Sbjct 329505 AAGAACCTTTTCTCTTACCACCTCCTTAATCTACATATCTAGCTGTGTCATTAAACACCT 329446 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 | |||||||| | | |||||| | | ||||| || ||| |||||| || | | Sbjct 329445 TTAACATTGGCACTAAACCATTACTTATTCCATTAGTTCCTCTGATATAACTATCTTAAG 329386 Query 63327 CACGAATATTACTAATTGA--TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384 | || || | || | || ||||| || || ||| |||| ||||| || || Sbjct 329385 ATCTGATCTT--TGATACACTTAATCCTATCCCTCCAGCCGATTTACTTATTAAAGCACA 329328 Query 63385 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444 || || | || ||||| || || ||||| |||||| | ||| | | |||||||| Sbjct 329327 TCTCTTCAGAGTTTCATATATACCATCTATTGAATCATCAACCATATCTAAAAGAAAACA 329268 Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504 ||||||| || | ||| || |||||||| || |||| || |||||||| Sbjct 329267 TGATGACATTTAAGGATAAGGAGTACCACTGTTAAATAATGTTGGAGTGGCATGAGTAAA 329208 Query 63505 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63564 | |||| || | || || || || | || |||| || | ||| || |||||| Sbjct 329207 ATACTTTTATGACATTAAATGATAAGTTTAAAAGACTGATTCCAAATCATCTTTATGAAT 329148 Query 63565 TCCTACTGC-GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA--- 63620 ||| | ||| || | |||||| | | | |||||||| | | ||| |||| Sbjct 329147 TCC-AATGCTAACTCTCATTAATAATTATTATGGTCTTTCTA----TTGGTTTTTTACCA 329093 Query 63621 -TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679 ||| | || || | |||| ||||| |||||||||||| ||| ||| | | ||| Sbjct 329092 TCTTTTAGTAAATAACTTCTTTCTAAAGTCTTAAAACCAAAAAAGTCATATTGATAATCT 329033 Query 63680 CGTTCGTA 63687 | ||| || Sbjct 329032 CTTTCATA 329025 >seq10 Length=733974 Score = 253 bits (280), Expect = 3e-62 Identities = 743/1137 (65%), Gaps = 11/1137 (1%) Strand=Plus/Minus Query 62564 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATT 62623 || || || || || |||| || ||||| || || ||||||||| | ||||| | | Sbjct 166400 AATGCATCAGCAAAACCTTAGACTCCAATTCCAATTGGTCTATGTTTTTTATTGCTGTAT 166341 Query 62624 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62683 || |||| | || ||| ||| | || | ||| || | | |||| |||||| | |||| Sbjct 166340 TCTGCTTATTTAACAGGGTAAAAGTTCAAATCAATGACTATATTTAGATTTGTTGTAATT 166281 Query 62684 ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---CATCTATTACAAACATG 62740 | ||| | ||| || ||| |||||||||| ||||| | | ||| | Sbjct 166280 ATTTTAGTAATTTCCAACAATTTATTAAAATCAAATGTTTTATCATCTTTGATTAACTTT 166221 Query 62741 TTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATT 62800 | ||| || | || ||||||||||| || | |||| | | ||||| || Sbjct 166220 TACAAATTAATACTAGCAAGATTACAAACAGCAATTTCATCTGGTGATGTATATTAAATA 166161 Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 || || ||||| | |||||||| ||| || ||||||||||||| || |||||| |||| Sbjct 166160 ATTTCTGTGCATAAATTACTACTCTTTATAGTTCCTAAATTTTTTTAATTACTTTTTTAA 166101 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 ||||| | ||| ||||| | || |||| ||||| || | || || ||||| Sbjct 166100 TTACATGAATCTTTATACAACATATATGGCAATCCAGTAGAGATTTAAGCATCAATAATT 166041 Query 62921 GCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGT 62980 ||| ||| | || |||||| ||| || | | | |||| ||| ||| Sbjct 166040 TCTTACCATAATTATCTAGCCTTCATTGTAACTCTACCCATATTTTTAGATTCATATTCA 165981 Query 62981 GTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGG 63039 |||||| | ||| || || | ||| || || | || || |||||||||| || Sbjct 165980 CAATACAACTTGTT-AAATTCTTATCCATAACAATCTTAAAGACCTGGACATTCATTTGG 165922 Query 63040 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63099 ||||| || | ||| ||| |||||| || |||| || ||| || | ||| || ||||| Sbjct 165921 GCACATTAAAGTCCAATCTTAGTCATCTTTAACTCTTTACATGAATAAATCTGGTATCCA 165862 Query 63100 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159 | | ||| ||||| |||||| | ||| | ||| || |||| ||| ||| | | | Sbjct 165861 CAAACCTAAAAATAAATCTCTTGCTCTTTATTCTTCTATTCCATGATTTTTTCTTAATTA 165802 Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 | ||| ||||||||| |||||| || ||||| ||||| || | | || | Sbjct 165801 TAAGAAACTTATAATATCACTATGCCATGGCTCCAAATATATAGCAAAAGAACCTTTTCT 165742 Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279 ||| ||||| | ||||| |||||||| || | |||| |||| | |||||||| | Sbjct 165741 TTTACCGCCTCCTTAATCTACATATCTAGCTGTATCATTAAAAACCTTTAACATTGGTAC 165682 Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 | |||||| | ||||| || ||| ||||| || | | | || || Sbjct 165681 TAAACCATTACTAATTCCATTAGTTCCTCTAATATAACTATCTTAAGATCTTATTTTTGA 165622 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 || || |||||||| ||||| |||| ||||| || |||| |||||| || || Sbjct 165621 AACACTTAATCCTATTCCTCCTGCTGATTTACTAATTAAGGCACATCTTTTTAAAGTTTC 165562 Query 63400 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459 ||| || || ||||| |||||| | ||| | | | |||||| ||||||| | Sbjct 165561 ATAAATTCCATCTATTGAATCATCTACCATATCTAACAAAAAACATGATGACATTTAAGG 165502 Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG 63519 | | ||| || |||||||| || |||| || |||||||| |||| | ||| | Sbjct 165501 ATAAGGAGTACCACTGTTAAATAATGTTGGAGTTGCATGAGTAAAAAATTTCTAAGACAT 165442 Query 63520 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC--TACTGCGACA 63577 || || || || | | ||||| | | ||| || ||| || || |||| || Sbjct 165441 TAAATGATAAGTTTAGAATGCTGACTAAAGATCTTCTTTATGGATACCAATACT--AACT 165384 Query 63578 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTATTTTCAACAAGTAGGA 63636 | |||||| | | | |||||||||| ||| || ||| ||| || || || Sbjct 165383 CTCATTAATAATTATTATGGTCTTTCAATCGGCTTCTTACCTTACTTT-AATAAATAACT 165325 Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 | | || ||||| |||||||||||| | | ||| | | |||| ||||||| |||| Sbjct 165324 TCTCTCTAAAGTCTTAAAACCAAAAAAATCATATTGATAATCTCTTTCGTAATTAAT 165268 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 |||||||||| ||||||||| | || || |||||| | ||||| ||||| | || ||| Sbjct 166763 AATTCTCCAGCCAATACTCTTCTTGTATATATATTAGTTGTATATGGTTCGAATGATTCA 166704 Query 62258 TTATTTCCCAAAATTTGAGCA-GTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62316 |||||| | ||||| ||| ||||||||||| ||||| ||||| | |||||| ||| Sbjct 166703 TTATTTTAAAGAATTT-AGCTCGTTGATGCAGTTGGCATTGGTGCAATTAATAAAGAATT 166645 Query 62317 TCT 62319 ||| Sbjct 166644 TCT 166642 >seq165 Length=168162 Score = 82.4 bits (90), Expect = 1e-10 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 80820 ATTGTTGAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTC 80879 ||||||||||| |||| |||||||| |||||||||||| || || || || || Sbjct 70812 ATTGTTGAATTTAGTGAAGCAATGGCAAATCTAGGAAAAATAGTAATTGTTGCAGCTCTT 70871 Query 80880 GATGGTACATTTCAACGTAAACCGTTTAATAATATCTTGGATCTTATTCCATTATCTGAA 80939 |||||||| ||| | | ||||| || |||||||||| | | |||||||| ||||| Sbjct 70872 GATGGTACTTTTGATAGAAAACCTTTCCGTAATATCTTGAGTTTGATTCCATTGGCTGAA 70931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627699222800