Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25]
543 sequences; 68,016,588 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq80 208 8e-49
>seq80
Length=351589
Score = 208 bits (230), Expect = 8e-49
Identities = 548/829 (66%), Gaps = 12/829 (1%)
Strand=Plus/Minus
Query 92746 AAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACATTTT 92805
||||| ||||| | |||||||| || || || || ||| ||||||| ||| ||||
Sbjct 175363 AAATCAGCATCCATAGTAAATACTTTATCTTGT---TTTTTACTCATAACTCCAGCTTTT 175307
Query 92806 TGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAATTC 92865
| || || || ||| || |||| ||||||||||| || |||| || |||||| || |
Sbjct 175306 TAATAGTCTCCGACTCTTCTTTCGAAGAAATTTGTTTTACCTTATAAGGATATCATATCC 175247
Query 92866 A-CTAGTGATT-GGATTCTTGGCGTTATAATACTTTTCACCGATC--AACTCGTACAATA 92921
| | | | | |||||||| | || || || |||| | || || | | ||
Sbjct 175246 ATCCATTCAAAAGGATTCTTTGAATTGTA-TA-TTTTAGGTGCTCCTAAAGAAAATATTA 175189
Query 92922 ATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGAC 92981
||||||| || ||||||||||| || | ||| |||| | |||||||||| | |
Sbjct 175188 ATCTATCTGCAACAAATTCTATATATTATTTCATTAAATTAGAATTCATTCCGATTAATT 175129
Query 92982 GTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTT 93041
|| |||| ||| || | | || ||||| || ||| |||| ||| | | ||||
Sbjct 175128 CAACTGGTAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGCTGATGAAATAATTT 175069
Query 93042 CTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGT 93101
| || ||| ||| | | | || || || | | || ||||| |
Sbjct 175068 AATGAATTCGTTGATTACTCAATTTATTAATCATATGTTTATATAGGAGACAAGCAAAAT 175009
Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161
| || || | ||||| |||| |||||| | ||||| || || | || || | |
Sbjct 175008 CAGTGTGAAGTCCTTCATCTCTTGATATAAGTTCATTTGAAAAGGTAAGTCCAGGCATTA 174949
Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221
| || ||| |||| |||||| || | | ||| ||||||||| || || ||||| |
Sbjct 174948 ATGATCTTTTTTTGATCCAAAAAATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCAA 174889
Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTA 93281
| || ||||| || | | | ||| ||||| || ||| | ||||| || |
Sbjct 174888 CAGCAGCAAAAGCGATTAATCTTTCAGCAAA---TGAATCATTCTAATTAATCCACTTCA 174832
Query 93282 AAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAAT 93341
||||| |||||||| | ||| ||| | | || ||||| | | || ||||
Sbjct 174831 TTGCCCACATTGCTTTTTTTTGTATAACAGGAACATTGTCAATAGCATGTAGAAGATAAT 174772
Query 93342 CTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGA 93401
| || | ||| |||||| || || || || |||||||| |||| ||||| |
Sbjct 174771 TTTTTTCATTTTCATCAGTTATGTAAGTGTCAATCAAAAGAGAATAAGTTTCTGAATGTA 174712
Query 93402 CATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTT 93461
||||||||| || |||| |||||| || |||||||| ||||| | || || |||||
Sbjct 174711 TATTCTCCATAGCTATTTAGAATCCATAAAAACATCTGGCTTCTGGAATTTGAACTTCAG 174652
Query 93462 GAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCA 93521
| ||||| || | || |||||||| || |||||||| ||||||||| ||||| |
Sbjct 174651 TACAAAATTACTAAGCTAGGTTTTCATTTACAATACCATCACTTGCTGCAAAGAAAGCAA 174592
Query 93522 ATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
| || ||||||||||||||| || || | | ||||| ||||||||
Sbjct 174591 GGACATACTTTATAAAATGTTTTTCGTCTGCAGTGAGCTTTTCCCAATC 174543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556857020307320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |