Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 1e-13 >seq21 Length=592296 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || ||||||||||||||||| || |||||||||| ||| |||||||| Sbjct 450420 ACCACCTCTTAATCTCAAAACTAAATGTAAGGTTGATTCTTTTTAAATATTGTAATCTGA 450361 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| | |||||| |||||||| || || | || | | | || || || || Sbjct 450360 AAGAGTTCTTCCATCTTCTAGTTGTTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGG 450301 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG-TTCAACGGTGTCGGTGGATTCGA 114333 || ||||| || || |||| || | |||| | | |||| |||||| | | || | Sbjct 450300 GATTCCTTCCTTATCTTAAATC-TTAGCTTTAACAGCGTCAATGGTGTCTGATGGCTCTA 450242 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || | || || || ||||| ||||| |||||||| | ||| Sbjct 450241 CATCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACAT 450193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131619629316