Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq21 118 8e-22 seq23 105 5e-18 seq37 100 2e-16 seq56 98.7 7e-16 seq25 98.7 7e-16 seq143 87.8 1e-12 >seq21 Length=592296 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| ||||||||||| | ||| || ||||||| || |||||||| Sbjct 450419 CCACCTCTTAATCTCAAAACTAAATGTAAGGTTGATTCTTTTTAAATATTGTAATCTGAA 450360 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| |||||| || || | ||||| | | || || ||| Sbjct 450359 AGAGTTCTTCCATCTTCTAGTTGTTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGG 450300 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || |||| || ||| ||| || || || || ||||| Sbjct 450299 ATTCCTTCCTTATCTTAAATCTTAGCTTTAACAGCGTCAATGGTGTCTGATGGCTCTACA 450240 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || ||||| || || ||||| ||||| |||||||||| |||||| Sbjct 450239 TCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACATATT 450190 >seq23 Length=588601 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| |||||||| || || || || || |||| ||||| || || Sbjct 76903 CCACCTCTTAATCTCAAAACTAAGTGGAGTGTTGATTCCTTTTAGATGTTATAGTCTGAA 76844 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| |||||||||||| ||| || || | || | | | || ||| ||| Sbjct 76843 AGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTATTAATCGGGTGGG 76784 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| | ||||| ||| ||| || |||||||| ||| || Sbjct 76783 ATTCCTTCCTTGTCTTAGATTTTAGCTTTAACAGCATCAATAGTATCAGATGGTTCAACA 76724 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || ||||| || ||||| ||||| |||| |||| Sbjct 76723 TCAAGAGTAATTGTCTTTCCTGTGAGTGTTTTAACAAAGATTTACATA 76676 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| |||||| || ||||| ||||| || || || |||| || || || || Sbjct 77132 GCCACCTCTCAATCTCAAGACTAAGTGAAGTGTTGATTCCTTTTAGATATTATAGTCTGA 77073 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 ||| |||| |||||||||||| ||| || || | || | | | || ||| ||| Sbjct 77072 GAGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTATTAATCGGGTGG 77013 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| | ||||| ||| ||| || |||||||| ||| || Sbjct 77012 GATTCCTTCCTTGTCTTAGATTTTAGCTTTAACAGCATCAATAGTATCAGATGGTTCAAC 76953 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || ||||| || || || || ||||||| ||| Sbjct 76952 ATCAAGAGTGATTGTCTTTCCTGTGAGTGTCTTGACGAAAATTTACAT 76905 >seq37 Length=526299 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || ||||| || ||||||| ||||| || || Sbjct 197467 CCACCTCTCAATCTCAAAACTAAGTGGAGGGTTGATTCTTTTTAAATGTTATAGTCTGAA 197408 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 197407 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 197348 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 197347 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAACA 197288 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || || || || || | ||||||||||| |||||||| || Sbjct 197287 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 197238 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 191458 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 191399 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 191398 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 191339 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 191338 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAACA 191279 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || || || || || | ||||||||||| |||||||| || Sbjct 191278 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCATTTT 191229 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 195151 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 195092 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 195091 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 195032 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 195031 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAACA 194972 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || || || | ||||||||||| |||||||| Sbjct 194971 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTGCAT 194925 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 197695 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 197636 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 197635 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 197576 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 197575 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAACA 197516 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || |||||||||| ||| Sbjct 197515 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 197469 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| ||||| |||||||| || || || || ||||||| ||||| || || Sbjct 195380 GCCACCTCTTAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 195321 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 195320 AAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 195261 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 195260 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAAC 195201 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || |||||||||| ||| Sbjct 195200 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 195153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 191687 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 191628 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 191627 AGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 191568 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || | || || ||| || Sbjct 191567 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGACTGTGTCTGATGGTTCAACA 191508 Query 15130 TCTAAGGTAATGGT-TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || |||||||||| ||| Sbjct 191507 TCAAGAGTGATGGTACTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 191460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| ||||| ||||||| || || || || ||||||| ||||| || || Sbjct 197923 GCCACCTCTTAATCTCAAAACTAG-TGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 197865 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | ||||||||||| || || || | || | | | || || ||| Sbjct 197864 AAGTGTTCTTCCATCTTCTAATTGCTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 197805 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 197804 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCGATTGTGTCTGATGGTTCAAC 197745 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || |||||||||| ||| Sbjct 197744 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 197697 >seq56 Length=425007 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||||| ||||| ||||| || || ||||||| ||||| || || Sbjct 240541 CCACCTCTCAATCTTAAGACTAAGTGAAGTGTTGATTCTTTTTAAATGTTATAGTCTGAA 240482 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | |||||||||| || || || | || | | | || || ||| Sbjct 240481 AGAGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240422 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 240421 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTTCAACA 240362 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || |||||||||| ||| Sbjct 240361 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAAATTTACAT 240315 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| ||||| || || |||||||| ||||| || || Sbjct 240313 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGAA 240254 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 240253 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240194 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| ||| ||| || || || || ||| || Sbjct 240193 ATTCCTTCCTTATCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGTTCAACA 240134 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || | || || || || ||||| || ||||| || ||||||| ||| ||| Sbjct 240133 TCGAGAGTGATTGTCTTTCCTGTGAGTGTTTTAACGAAAATTTACATTTTT 240083 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 127586 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 127645 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 127646 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 127705 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 127706 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGTTCAACA 127765 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || || | ||||||||||| |||| |||| Sbjct 127766 TCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 127813 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| |||||| || ||||| || || || || ||||||| ||||| || || Sbjct 117015 GCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 116956 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 116955 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 116896 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 116895 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGTTCAAC 116836 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || || | ||||||||||| |||| |||| Sbjct 116835 ATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 116787 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| |||||| || ||||| || || || || ||||||| ||||| || || Sbjct 131140 GCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 131081 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 131080 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 131021 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 131020 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGTTCAAC 130961 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || || | ||||||||||| |||| |||| Sbjct 130960 ATCAAGAGTAATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATA 130912 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||||| ||||| ||||| || || ||||||| ||||| || || Sbjct 240997 CCGCCTCTTAATCTTAAGACTAAGTGAAGTGTTGATTCTTTTTAAATGTTATAGTCTGAA 240938 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || ||| | || | | | || || ||| Sbjct 240937 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCGAAAATGAGTCTTTATTAATCAGGTGGG 240878 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| ||| Sbjct 240877 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTTCGACG 240818 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || ||||| || |||| || || || ||||||| ||| Sbjct 240817 TCAAGAGTGATTGTTTTTCCAGTCAATGTCTTAACGAAAATTTACAT 240771 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 54580 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 54639 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 54640 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 54699 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 54700 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCAACA 54759 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || || ||||||| ||| Sbjct 54760 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAAATTTACAT 54806 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 54808 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 54867 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 54868 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 54927 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 54928 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCAACA 54987 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || || || | ||||||||||| |||| ||| Sbjct 54988 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACAT 55034 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| || || || || ||||||| ||||| || || Sbjct 55840 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 55781 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 55780 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 55721 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 55720 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCAACA 55661 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || || || | ||||||||||| |||| ||| Sbjct 55660 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACAT 55614 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| |||||||| ||||| || || ||||||| ||||| || || Sbjct 240769 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTTGATTCTTTTTAAATGTTATAGTCTGAA 240710 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 240709 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 240650 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| ||| ||| || || || || ||| || Sbjct 240649 ATTCCTTCCTTATCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGTTCAACA 240590 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || || ||||||| ||| Sbjct 240589 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAAATTTACAT 240543 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||| ||||| |||||||| || || || || ||||||| ||||| || || Sbjct 56069 GCCACCTCTTAATCTCAAAACTAAGTGGAGAGTTGATTCTTTTTAAATGTTATAGTCTGA 56010 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| | |||||||||| || || || | || | | | || || ||| Sbjct 56009 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 55950 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| ||||||| ||| ||| || || || || ||| || Sbjct 55949 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCAGATGGTTCAAC 55890 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || |||| || || || ||||||| ||| Sbjct 55889 ATCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAAATTTACAT 55842 >seq25 Length=585425 Score = 98.7 bits (108), Expect = 7e-16 Identities = 173/248 (70%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| | ||| ||||||||||| || || || ||||||| ||||| ||||| Sbjct 450120 CCTCCTCTAAGTCTCAAAACTAAATGGAGAGTTGATTCTTTTTAGATGTTATAATCTGAA 450061 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||| ||||| || ||||| | || || | | || || || Sbjct 450060 AGTGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGGG 450001 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| |||| ||||| || ||| || || || || || || Sbjct 450000 ATTCCTTCCTTGTCTTAAATCTTTGC-CTTAACAGCATCGATGGTGTCAGATGGCTCAAC 449942 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 || | || ||||| || ||||| || ||||| |||||||||| |||| || |||| Sbjct 449941 ATCAAGAGTGATGGTCTTGCCTGTGAGGGTTTTAACAAAAATTTACATA-TTATTTTAAA 449883 Query 15189 TTTTTTAA 15196 |||||||| Sbjct 449882 TTTTTTAA 449875 >seq143 Length=219650 Score = 87.8 bits (96), Expect = 1e-12 Identities = 165/242 (68%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| |||||||||||||||||||| || || |||| || || || || Sbjct 171910 CCTCCTCTCAACCTTAAAACTAAATGAAGGGTTGATTCCTTTTAGATATTATAGTCTGAA 171851 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | |||||||||| ||| || || | || | | | | || ||| Sbjct 171850 AGAGTTCTTCCATCTTCTAATTATTTCCCTGCAAAAATAAGCCTTTACTAATCAGGTGGT 171791 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| ||||||| ||| ||| || || || || || || Sbjct 171790 ATTCCTTCTTTGTCTTAAATTTTAGCTTTGACAGCGTCAATTGTGTCTGATGGCTCGACA 171731 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA---TTTGAAATA 15186 || | || || ||||| || || | || || ||||||||||||||| | ||| ||| Sbjct 171730 TCAAGTGTGATTGTTTTTCCAGTTAAGGTCTTGACAAAAATTTGCATAACTTATGATATA 171671 Query 15187 AA 15188 || Sbjct 171670 AA 171669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389634846755