Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq80 102 1e-16 >seq80 Length=351589 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| |||||||| | || || || ||||| ||| |||||||||||| | | | Sbjct 175003 TGAAGTCCTTCATCTCTTGATATAAGTTCATTTGAAAAGGTAAGTCCAGGCATTAATGAT 174944 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 ||||| || | |||||| ||||||||||| ||||||||||||||||| || ||| Sbjct 174943 CTTTTTTTGATCCAAAAAATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCAACAGCA 174884 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653 || ||||||| || | |||||||| Sbjct 174883 GCAAAAGCGATTAATCTTTCAGCAAA 174858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972002325400