Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq75 473 1e-128 seq10 457 1e-123 seq4 444 7e-120 seq80 365 5e-96 seq165 107 2e-18 seq131 107 2e-18 >seq75 Length=370783 Score = 473 bits (524), Expect = 1e-128 Identities = 704/994 (71%), Gaps = 41/994 (4%) Strand=Plus/Plus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTTT 18673 |||||||| |||||| || ||| || |||| || | |||||||||| ||||| Sbjct 196117 AAAAATCAGCATCCATAGTAAATACTTTATCTTATTTTTTACTCATTACTCCAGCTTTTT 196176 Query 18674 GATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCC 18732 || || | |||||| |||| |||||||||||||| || | |||||||| ||| ||| Sbjct 196177 AGTAATCTCCTACTCTTCTTTCGAAGAAATTAGTTTTACCTTACAATGATAT-CATATCC 196235 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttt-tGAATCCTAATTCTAATAGTAG 18791 || | ||||| ||||| ||| ||| |||||||| || | |||||| | |||| ||| Sbjct 196236 ATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCA-CCTAATGCAAATATTAG 196294 Query 18792 TCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTT 18851 |||||| || ||||||| ||||||| ||||| | || | |||||||||| ||||||| Sbjct 196295 TCTATCTGCAACAAATTCAATATATTATTTCATTAAATTAGAATTCATTCCAATTAATTC 196354 Query 18852 AACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGA 18911 || |||| || || | | |||||||| ||| || | ||||| ||||||||| Sbjct 196355 GACTGGTAAAGCTTCGCTTATAAATTCTTTTTCAATTTCAACTGCGGATGATATAATTTC 196414 Query 18912 TACAACTCTATCTTCATTAGG-AGGGTATAGAAGA--TGTTTAAACATCAAACATGCAAA 18968 || || || |||| | ||| | | ||||| | | | ||| ||||| Sbjct 196415 ATGAATTCG---TTGATTACTCAATTTATTTACTAAGTGTTTGTAAAGAAGACAAGCAAA 196471 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||| ||| || || || ||||| || |||||||| |||||||||| || ||||| Sbjct 196472 ATCAGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTTAGTCCTGGCAT 196531 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || | ||| ||||||| ||||||||| | | |||||| ||||||||||| |||||||| Sbjct 196532 CAATGATCTCTTTTTTATCCAGAATATTGCACAAAATGAACCAGAAAAGAAAATACCTTC 196591 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||||| |||||||||| || |||||| || || || ||||| | | |||||||| Sbjct 196592 AACTGCAGCAAAAGCAATTAATCTTTCAGCA-AATGAG--TCATTTTAGTTTATCCATTT 196648 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || ||||| || ||||||| || | |||| | || |||| || || || || Sbjct 196649 CATAGCCCACATTGCTTTCTTTTATATAACAGGCACATTATCAATAGCATGAAGAAGGTA 196708 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | |||| | ||| ||| ||| | ||| || || | ||| ||||||| || Sbjct 196709 ATTTTTTTCATTTTCATCAGTAATATAAGTATCAATTAAAAGTGAGTAAGTTTCTGAGTG 196768 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 ||||||||| || || || | |||||| ||||||||||||||||||| | || ||||| Sbjct 196769 AATATTTTCCATTGCTATTTAAAATCCATAAAAACATCTTGCTTCTGGAACTTGAACTTC 196828 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | |||| ||| || ||||||||||||| || || |||||||| |||||||| || || Sbjct 196829 AGTACAGAATTATTAAGCCAAATTTTCATTCACAATGCCATCACTTGCTGCAAAGAAAGC 196888 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATC 19448 | |||| || ||||| ||||||||||||| |||| | | | |||||| || | ||| Sbjct 196889 AAGCACATACTTTATAAAGTGTTTTTCATCTGCTGTTAGTTTTTCCCAATCTTTTAAATC 196948 Query 19449 --------------TTTAGAT--------------AAATCTACTTCTTCAACTGTCCAAA 19480 |||| || ||||||| |||||| ||||||||| Sbjct 196949 CTAAAATTTATTAATTTACATATAATACCTAATACAAATCTATCTCTTCAGCTGTCCAAA 197008 Query 19481 AAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAA 19540 || || | || ||||||||| ||||| |||||| ||||| ||||||||| | | Sbjct 197009 AACTTGCTTTATGTTATTTATACATATTCCAAATATCATTATATTTTATAGGAAACAATA 197068 Query 19541 CAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 ||||||||||| ||||| ||| | || |||||| Sbjct 197069 CAAATCTATTTGGATTTTGTTTCAAAAGAGGTTC 197102 >seq10 Length=733974 Score = 457 bits (506), Expect = 1e-123 Identities = 1177/1789 (66%), Gaps = 26/1789 (1%) Strand=Plus/Minus Query 47020 AATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATT 47079 ||||| | ||||| || ||||| ||| ||| |||| |||||||| || | || Sbjct 167076 AATAA-ATATACCTGTTTTTAATCCTTTTTCCCAAGCATAAAAATGCATGGATGTCACTT 167018 Query 47080 TAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCAC 47139 | || | | ||||| | ||||||||||| | ||||| || | ||||||||||| | Sbjct 167017 TGGACATAGTTGGTTCAGCCATATGAATATTTAAGGATTGGCTTTAATCAATAAATGGAG 166958 Query 47140 CTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAA 47199 |||| || ||| | || || ||| | ||| | || ||||| || |||||||| | Sbjct 166957 CTCTGGAAGTTGCTAAATTCAATATAGCTTTTTAAGAGATTTCCCAAACAGTTTTATATA 166898 Query 47200 TTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataa 47256 || |||||||| | ||| | | | |||| | | ||| || || || | Sbjct 166897 ATTATTTAATGTTATTTGGAATTTCATCTATATTCTACACAGAACCATTATTCATGATTA 166838 Query 47257 ttttgttttttaattcattt-gaccaaagttttcgttcagttaatgtttttaaAAGATGA 47315 ||||||||| |||| || | ||| | ||| ||||| | || | | | |||| Sbjct 166837 ATTTGTTTTT-AATTTATGGCGTCCATAAATTTAGTTCAATCAAATCATCAACTAAATGA 166779 Query 47316 GGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATAT 47375 ||||| | | |||||||||| | |||||| | ||||||||||| |||||||| Sbjct 166778 GGATTTATGCATACGAATTCTCCAGCCAATACTCTTCTTGTATATATATTAGTTGTATAT 166719 Query 47376 GGTTCTATAGATTCATTATTTCCAAAAATTTGAGCA-GTTGATGCTGTAGGCATGGATGC 47434 ||||| | |||||||||||| || ||||| ||| |||||||| || ||||| | ||| Sbjct 166718 GGTTCGAATGATTCATTATTTTAAAGAATTT-AGCTCGTTGATGCAGTTGGCATTGGTGC 166660 Query 47435 AACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATC 47494 || |||||| |||||| | ||||| ||| || | ||||||| Sbjct 166659 AATTAATAAAGAATTTCTCATTCCATGTTTCATAATATTCTATTTTAAAGTAGTCCAATC 166600 Query 47495 CCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGG 47554 | | | ||||| | ||| | |||| |||| | ||||||| || Sbjct 166599 ATATAATT---ATGGAGTGATGCCCCACATATCAAATTGTAATATTCCTTATGAGGCTGG 166543 Query 47555 AGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAA 47614 | |||| || | | | ||||| || || || ||| | |||| | | || | Sbjct 166542 ACTACCAGTAAAAGACTCATAAGATCCAAATTTTTAAGCCAATTCAAATGATCTTTAACA 166483 Query 47615 TGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTC 47674 ||| | | | |||||||||||||| ||||| ||| | || |||||| ||| || Sbjct 166482 TGCTCCAAAGTATATTGTTTCAAAAATTTTAGCGTTCAAATCTAAAGCTTCTTCTGAATC 166423 Query 47675 AAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGG 47734 ||| || |||| ||| || || |||| || ||||| |||||||| Sbjct 166422 AAATGGTATTTTCATTCTTTGTAATGCATCAGCAAAACCTTAGACTCCAATTCCAATTGG 166363 Query 47735 TCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAAT 47794 |||||| ||||||| | || |||| | | || || ||| | ||| || | Sbjct 166362 TCTATGTTTTTTATTGCTGTATTCTGCTTATTTAACAGGGTAAAAGTTCAAATCAATGAC 166303 Query 47795 TTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTT 47854 | |||||||| |||||| ||||||||||||||||| | Sbjct 166302 TATATTTAGATTTGTTGTAATTATTTTAGTAATTTCCAACAATTTATTAAAATCAAATGT 166243 Query 47855 GTTATT---TATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTC 47911 |||| | | | ||| | | | ||| || |||||||| ||||| | || Sbjct 166242 TTTATCATCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTACAAACAGCAATTTC 166183 Query 47912 ATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAA 47971 || ||| ||||||| || ||||| | |||| ||||| || || ||||| || || Sbjct 166182 ATCTGGTGATGTATATTAAATAATTTCTGTGCATAAATTACTACTCTTTATAGTTCCTAA 166123 Query 47972 ATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGT 48031 ||||| | |||| | | ||||||| || || || | |||| | || |||||| Sbjct 166122 ATTTTTTTAATTACTTTTTTAATTACATGAATCTTTATACAACATATATGGCAATCCAGT 166063 Query 48032 TTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGC 48091 || | || ||||| || || ||| | |||||||| || | ||||| | Sbjct 166062 AGAGATTTAAGCATCAATAATTTCTTACCATAATTATCTAGCCTTCATTGTAACTCTACC 166003 Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151 |||| | | ||| |||| | ||| ||||| | |||||| | ||||| ||| | | Sbjct 166002 CATATTTTTAGATTCATATTCACAATACAACTTGTTAAATTCTTATCCATA-ACAATCTT 165944 Query 48152 TAAC-CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210 || || ||||||||||| || ||||| || | |||||| | |||| ||| ||||| Sbjct 165943 AAAGACCTGGACATTCATTTGGGCACATTAAAGTCCAATCTTAGTCATCTTTAACTCTTT 165884 Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 ||| |||| |||||||||||| | | ||| ||||||||| || | |||| |||||| Sbjct 165883 ACATGAATAAATCTGGTATCCACAAACCTAAAAATAAATCTCTTGCTCTTTATTCTTCTA 165824 Query 48271 TGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 | ||| ||| || |||| | |||||| | || |||||| ||||||||| || ||| Sbjct 165823 TTCCATGATTTTTTCTTAATTATAAGAAACT-TATAATATCACTATGCCATGGCTCCAAA 165765 Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389 ||||| || | |||| || |||| ||||||| ||||| |||||| || |||| Sbjct 165764 TATATAGCAAAAGAACCTTTTCTTTTACCGCCTCCTTAATCTACATATCTAGCTGTATCA 165705 Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449 ||| |||| |||||||||| || | |||||| || ||||| ||||| ||||||| Sbjct 165704 TTAAAAACCTTTAACATTGGTACTAAACCATTACTAATTCCATTAGTTCCTCTAATATAA 165645 Query 48450 CTTCCACTAGCTCTTATATT---ACTAATTGAAATACCTATACCACCTGCCATTTTAGAT 48506 || | || |||||| || | | || ||| ||||| || ||||| |||| Sbjct 165644 CTATCTTAAGATCTTATTTTTGAAACACTT--AAT-CCTATTCCTCCTGCTGATTTACTA 165588 Query 48507 ATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTT 48566 |||| ||||| | ||| | || ||||||||||| ||||| |||||||| ||||| | Sbjct 165587 ATTAAGGCACATCTTTTTAAAGTTTCATAAATTCCATCTATTGAATCATCTACCATATCT 165528 Query 48567 AATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGAT 48626 || | |||||| ||||||| |||| | ||| || |||||||||||||||| | Sbjct 165527 AACAAAAAACATGATGACATTTAAGGATAAGGAGTACCACTGTTAAATAATGTTGGAGTT 165468 Query 48627 GCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCC 48686 |||||| |||| |||||| || | || | ||| |||| | | || | | ||| Sbjct 165467 GCATGAGTAAAAAATTTCTAAGACATTAAATGATAAGTTTAGAATGCTGACTAAAGATCT 165408 Query 48687 CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746 || ||| ||||| ||| || | |||||| | |||| |||||||||| || Sbjct 165407 TCTTTATGGATACCAATACTAACTCTCATTAATAATTATTATGGTCTTTCAATCGGCTTC 165348 Query 48747 TTA-TTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAA 48794 ||| ||| ||| || | ||| | | || || || |||||||||||| Sbjct 165347 TTACCTTACTTT-AATAAATAACTTCTCTCTAAAGTCTTAAAACCAAAA 165300 >seq4 Length=867223 Score = 444 bits (492), Expect = 7e-120 Identities = 1186/1808 (66%), Gaps = 36/1808 (2%) Strand=Plus/Minus Query 47010 TTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATA 47069 ||| || |||||| ||||||| || ||||| ||| ||| |||||||||||||| Sbjct 330837 TTTATTATTAAATAG-ACATACCTGTTTTTAATCCTTTTTCCCAAGCATAGAAATGCATA 330779 Query 47070 CTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCA 47129 |||| |||||| | ||||||| | ||||||||||| | |||| ||| | ||| Sbjct 330778 GATGTTACTTTAGACATAGTAGGTTCAGCCATATGAATATTCAATGATTAACTTTAATCT 330719 Query 47130 ATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACT 47189 ||||||| | |||| || ||| | || ||| ||| | ||| | ||||||||| || Sbjct 330718 ATAAATGGAGCTCTTGAAGTTGCTAAATTTAATATAGCTTTTTAAGATATCTCCCAAACG 330659 Query 47190 GTTTTATAAATTTGTTTAATGTCTTCTGGGAGAT----TAGTATTTTGAATAGATCCTCC 47245 |||||||| | || |||||| | | ||| | | || |||||| || || || Sbjct 330658 GTTTTATATAATTATTTAATATTATTTGGAATTTCTTCTA-TATTTTAGATTGAACCATT 330600 Query 47246 gttttctataattttgttttttaattcatt-tgaccaaagttttcgttcagttaatgttt 47304 || || | ||||||||| |||| || || ||| | || ||| | || | Sbjct 330599 ATTCATGATTAATTTGTTTTT-AATTTATGGTGTCCATAAATTCAATTCTATCAAATCAT 330541 Query 47305 ttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATAT 47364 | ||||||||||| | | |||||||||| | |||||| | |||| |||| Sbjct 330540 CAACTAGATGAGGATTTATGCATACGAATTCTCCAGCCAATACTCTTCTTGTATAGATAT 330481 Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424 || | ||||||||||| | |||||||||||| || ||||| | ||||||||||| | Sbjct 330480 TAGTAGTATATGGTTCAAATGATTCATTATTTTAAAGAATTTAACTTGTTGATGCTGTTG 330421 Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNN 47484 |||| | |||| ||||| |||||| | |||||||| || | Sbjct 330420 GCATAGGCGCAATCAATAAAGAATTTCTCATACCATATTTCATAATATTTTATTTTAAAG 330361 Query 47485 GTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTT 47544 |||||||| | | | ||||||| ||| ||| | |||| ||| | ||||||| Sbjct 330360 TATTCCAATCATATAATT---ATGGAACTACACCCCACATATCAAATTATAAGATTCCTT 330304 Query 47545 TACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAAC 47604 ||| ||| | | |||| |||||| || || || | | ||| | Sbjct 330303 ATGAGGCTGGACTTCCAGGAAAGGTTTCATAAGGTCCTAATTTTTATGATAATTCTAAGG 330244 Query 47605 TTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG-CT 47663 | || |||| | |||||| || || ||||| ||||| ||||| |||| | | Sbjct 330243 ATCTTTGACATGCTCCATAATAAATGGTCTCAAAGATTTTAGAGTTTA-ATTCTAAGGCA 330185 Query 47664 TCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCA 47723 || || ||||| || |||| |||||| ||||||| || ||| Sbjct 330184 TCATCAGAATCAAATGGTATTTTCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCA 330125 Query 47724 ATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTT 47783 |||||||||||||||| |||||||| | | || |||| | | | ||| || Sbjct 330124 ATACCAATTGGTCTATTTCTTTTATTACTATATTCTGCTTGTTTAACAGAATAAAAATTC 330065 Query 47784 ATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTA 47843 | ||| |||| | |||||| | ||| ||| |||||| | Sbjct 330064 AAATCAATAACTATATTTAAATTTGTTGTAATTATTTTAGTAATCTCTAATAATTTCTCG 330005 Query 47844 AAATCAAACTTGTTATT---TATAACAAACCTATTAAGTGCTATAGATGCTAGATTACAT 47900 |||||||| | |||| | | | ||| | | | ||| || |||||||| Sbjct 330004 AAATCAAATGTTTTATCATCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTACAA 329945 Query 47901 ACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTG 47960 ||||| | |||| ||| ||| ||| || ||||||| |||| ||| | || |||| Sbjct 329944 ACAGCAATTTCATCTGGTGATGTAAATTAAATAATTTCAGTGCATAAATTGCTACTTTTG 329885 Query 47961 ATAGTACCCAAATTTTGATGATTATTNNNNTTG--TTACATGCGTCCTTGTAAAGCATAA 48018 ||||| || | ||| | | |||| | ||| |||||||| || || || | |||| Sbjct 329884 ATAGTTCCAAGATTCTTTTAATTACTCT--TTGAATTACATGCATCTTTATATAACATAT 329827 Query 48019 AAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA 48078 ||||| ||||||| || |||| || || || || ||| | ||||| || | Sbjct 329826 AAGGTAATCCAGTTGAAATTTGAGCATCTATTATTTCTTACCATAATTATCTAGCTTTCA 329767 Query 48079 TAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCC 48138 || ||||| | |||| | | || || | |||||| || | | |||| | | Sbjct 329766 TAGTTACTCTACCCATATTTTTAGACTCATACTCAGTATACAATTAATTGAATTATTGTC 329707 Query 48139 CATACACATTATCTAAC-CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCA 48197 |||| ||| | | || |||||||||||||| ||||||||||| | ||| || | ||| Sbjct 329706 CATA-ACAATCTTAAAGTCCAGGACATTCATTTGGACACATCAAAGTCCAGTCTTAGTCA 329648 Query 48198 TTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTT 48257 | ||| ||||| ||| |||| |||||| ||||| | | ||| ||||||||| || | | Sbjct 329647 TCTTTAACTCTTTACATGAATAAATCTGGGATCCACAAACCTAAAAATAAATCTCTTGCT 329588 Query 48258 CTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC-AAGAAAGTCCATTATATCAGCATG 48316 ||| |||||| | ||| |||| || | | || |||||| | || || ||| ||| Sbjct 329587 CTTTATTCTTCTATTCCATGATTCTTTCTCAATTATAAGAAACTT-ATAATGTCACTATG 329529 Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376 ||||||||| ||||| || || | |||| || ||| |||||||| ||||| ||| Sbjct 329528 CCATGGTTCCAAATAGATAGCAAAAGAACCTTTTCTCTTACCACCTCCTTAATCTACATA 329469 Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436 ||| || || | ||| | || |||||||||| || | |||||| ||| ||||| || Sbjct 329468 TCTAGCTGTGTCATTAAACACCTTTAACATTGGCACTAAACCATTACTTATTCCATTAGT 329409 Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATA--CCTATACCACCT 48494 ||| |||||||| | || ||| || || | || | || ||||| || || Sbjct 329408 TCCTCTGATATAACTATCTTAAGATCTGATCTT--TGATACACTTAATCCTATCCCTCCA 329351 Query 48495 GCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCA 48554 ||| |||| ||||| |||||| | || || || ||||| || || ||||| |||| Sbjct 329350 GCCGATTTACTTATTAAAGCACATCTCTTCAGAGTTTCATATATACCATCTATTGAATCA 329291 Query 48555 TCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAAT 48614 || | ||||| ||| |||||||| ||||||| |||| | ||| || |||||| Sbjct 329290 TCAACCATATCTAAAAGAAAACATGATGACATTTAAGGATAAGGAGTACCACTGTTAAAT 329231 Query 48615 AATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACA 48674 |||||||||| |||||| |||| | || | ||| | || | ||| |||| || || Sbjct 329230 AATGTTGGAGTGGCATGAGTAAAATACTTTTATGACATTAAATGATAAGTTTAAAAGACT 329171 Query 48675 GAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTT 48734 || || | ||| || ||| || || || || | |||||| | |||| |||||| Sbjct 329170 GATTCCAAATCATCTTTATGAATTCCAATGCTAACTCTCATTAATAATTATTATGGTCTT 329111 Query 48735 TCAACAATTTTGTTATTTA----TTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACC 48790 || | || ||| |||| ||| | | ||| | |||| || || |||||||| Sbjct 329110 TCTA----TTGGTTTTTTACCATCTTTTAGTAAATAACTTCTTTCTAAAGTCTTAAAACC 329055 Query 48791 AAAATAGT 48798 |||| ||| Sbjct 329054 AAAAAAGT 329047 >seq80 Length=351589 Score = 365 bits (404), Expect = 5e-96 Identities = 681/995 (68%), Gaps = 44/995 (4%) Strand=Plus/Minus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTTT 18673 |||||||| |||||| || ||| || |||| || | |||| ||||| ||||| Sbjct 175365 AAAAATCAGCATCCATAGTAAATACTTTATCTTGTTTTTTACTCATAACTCCAGCTTTTT 175306 Query 18674 GATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCC 18732 ||| || | |||||| |||| |||||||| ||||| || | ||| ||||| ||| ||| Sbjct 175305 AATAGTCTCCGACTCTTCTTTCGAAGAAATTTGTTTTACCTTATAAGGATAT-CATATCC 175247 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792 || | ||||| ||||| ||| ||| |||||||| |||||| |||| || | Sbjct 175246 ATCCATTCAAAAGGATTCTTTGAATTGTATATTTTAGGTGCTCCTAAAGAAAATATTAAT 175187 Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852 ||||| || ||||||| |||||| ||||| | || | |||||||||| ||||||| | Sbjct 175186 CTATCTGCAACAAATTCTATATATTATTTCATTAAATTAGAATTCATTCCGATTAATTCA 175127 Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGAT 18912 || |||| || || ||| |||||||| ||| || | || || ||| ||||| | Sbjct 175126 ACTGGTAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGCTGATGAAATAATTTAA 175067 Query 18913 ACAACTCTATCTTCATTAGG-AGGGTATAGA--AGATGTTTAAACATCAAACATGCAAAA 18969 || || || |||| | ||| | | ||||||| | | | ||| |||||| Sbjct 175066 TGAATTCG---TTGATTACTCAATTTATTAATCATATGTTTATATAGGAGACAAGCAAAA 175010 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 ||| || ||||| || ||||| ||| | |||||| ||||| || | |||||||| Sbjct 175009 TCAGTGTGAAGTCCTTCATCTCTTGATATAAGTTCATTTGAAAAGGTAAGTCCAGGCATT 174950 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | | ||||||||| | ||| || || | | |||||| ||||||||||| || ||||| Sbjct 174949 AATGATCTTTTTTTGATCCAAAAAATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCA 174890 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 || || |||||||| | || |||||| || | | |||||| | || |||||| ||| Sbjct 174889 ACAGCAGCAAAAGCGATTAATCTTTCAGCAAAT---GAATCATTCTAATTAATCCACTTC 174833 Query 19150 AGTGCCCAATCAGCCTTCTTTTTTACACATGG--CATTGTCTCTATAGAATTAAATAGAT 19207 | |||||| || || |||| || | || ||||||| |||| || | |||| Sbjct 174832 ATTGCCCACATTGCTTTTTTTTGTATAACAGGAACATTGTCA--ATAGCATGTAGAAGAT 174775 Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267 | | |||| | ||| | | || | || ||||| | | || ||||||||| Sbjct 174774 AATTTTTTTCATTTTCATCAGTTATGTAAGTGTCAATCAAAAGAGAATAAGTTTCTGAAT 174715 Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327 | ||||| || ||||| || | ||||| ||||||||||| ||||||| || || |||| Sbjct 174714 GTATATTCTCCATAGCTATTTAGAATCCATAAAAACATCTGGCTTCTGGAATTTGAACTT 174655 Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387 || |||||||| | | | |||||||| || || |||||||| |||||||| || | Sbjct 174654 CAGTACAAAATTACTAAGCTAGGTTTTCATTTACAATACCATCACTTGCTGCAAAGAAAG 174595 Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATAT 19447 | | |||| || |||||||||||||| |||| || | | | |||||| |||| || Sbjct 174594 CAAGGACATACTTTATAAAATGTTTTTCGTCTGCAGTGAGCTTTTCCCAATCTTTAAGAT 174535 Query 19448 C------TTT---------------------AGATAAATCTACTTCTTCAACTGTCCAAA 19480 | ||| | ||||||| | |||||| ||||||||| Sbjct 174534 CCTAAAATTTTATTATTATAAATACTACCTAATATAAATCGATCTCTTCAGCTGTCCAAA 174475 Query 19481 AAGAAGC-CTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATA 19539 | || | ||| | ||||||||| ||||| || ||| |||| || || || | | Sbjct 174474 AGCTTGCTTTGTGC-TATTTATACATATTCCAGATGTCATTGTATTTGATTGGGAAGAGA 174416 Query 19540 ACAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 |||||||||||| ||| ||| | || ||| || Sbjct 174415 ACAAATCTATTTGGGTTTGGTTTCAAAAGAGGCTC 174381 >seq165 Length=168162 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| ||||| ||||||||| |||||||||||| || |||||||| | Sbjct 70812 ATTGTTGAATTTAGTGAAGCAATGGCAAATCTAGGAAAAATAGTAATTGTTGCAGCTCTT 70871 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 ||||| || ||| | ||||||||||| ||||| | || | ||| |||||||| ||||| Sbjct 70872 GATGGTACTTTTGATAGAAAACCTTTCCGTAATATCTTGAGTTTGATTCCATTGGCTGAA 70931 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 ||||||| | || ||||| ||| Sbjct 70932 CGTATAACAAAGTTAACTGCTGTCTGT 70958 >seq131 Length=247357 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| |||| || ||||||||| ||| || || || ||||||||||| | Sbjct 143607 ATTGTTGAATTTAGTGAGAAAATGGCAAATTTAGGGAAGATTGTAATAGTTGCAGCTCTT 143666 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 |||||||||||| | || |||||||| |||| | |||||||| || || || ||||| Sbjct 143667 GATGGAACATTTGATAGGAAACCTTTCCATAATATTTTAAATTTGATACCGTTGGCTGAA 143726 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 |||||||| | ||||| || ||| Sbjct 143727 CGCATAACAAAATTAACAGCGGTATGT 143753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562104984686520