Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq21 86.0 5e-12 >seq21 Length=592296 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || ||||||| || ||||||| |||||||||||| || Sbjct 450419 CCACCTCTTAATCTCAAAACTAAATGTAAGGTTGATTCTTTTTAAATATTGTAATCTGAA 450360 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || || | || || || ||||| |||| || | || ||| | || Sbjct 450359 AGAGTTCTTCCATCTTCTAGTTGTTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGG 450300 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || |||||| ||| |||| | | | ||||| | ||| || Sbjct 450299 ATTCCTTCCTTATCTTAAATCTTAGCTTTAACAGCGTCAATGGTGTCTGATGGCTCTACA 450240 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || |||||||||| ||||| |||||||| | ||| Sbjct 450239 TCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACAT 450193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935079026389