Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq80 298 8e-76 seq75 291 1e-73 seq21 134 2e-26 seq56 120 4e-22 seq143 114 2e-20 seq28 111 2e-19 seq37 100 4e-16 seq23 98.7 1e-15 seq25 96.9 5e-15 >seq80 Length=351589 Score = 298 bits (330), Expect = 8e-76 Identities = 542/777 (70%), Gaps = 23/777 (3%) Strand=Plus/Minus Query 17846 TTTTTA-TCAAAATT--AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTC 17902 |||||| ||| || | |||||||| || ||||||||| || | |||||||||||||| Sbjct 175330 TTTTTACTCATAACTCCAGCTTTTTAATAGTCTCCGACTCTTCTTTCGAAGAAATTTGTT 175271 Query 17903 TTTCCTTCCAATGATATTAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTT 17962 || |||| || ||||| | || ||| | ||||| ||||| | | || || |||||| Sbjct 175270 TTACCTTATAAGGATATCATATCCATCCATTCAAAAGGATTCTTTGAATTGTA-TATTTT 175212 Query 17963 TCTTG-TATTAATTCGTATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAA 18021 || | ||| ||| |||||||||||| |||||||| | ||||| | ||| || Sbjct 175211 AGGTGCTCCTAAAGAAAATATTAATCTATCTGCAACAAATTCTATATATTATTTCATTAA 175152 Query 18022 ATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTAT 18081 || ||||||| || | || | | |||| ||| ||| ||||||||||||| || || Sbjct 175151 ATTAGAATTCATTCCGATTAATTCAACTGGTAAAGCTTCACTAATAAATTCTTTTTCAAT 175092 Query 18082 CTCAACAGACTCTTTTATTATGTTTATTAC--CCTAGATTTTGGCAATTTATTAATTATG 18139 ||||||| || | | || || || | | | |||| |||||||||||| || Sbjct 175091 TTCAACAG-CTGATGAAATAATTTAATGAATTCGTTGATTACT-CAATTTATTAATCATA 175034 Query 18140 TGATTATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAAT 18199 || ||||| || | ||| |||||||||||||| | ||||||||||| ||||| | | Sbjct 175033 TGTTTATA---TAGGAGACAAGCAAAATCAGTGTGAAGTCCTTCATCTCTTGATATAAGT 174977 Query 18200 TCGTTACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCG 18259 || || ||| || | || ||||||| ||||||||| | |||||| || | Sbjct 174976 TCATTTGAAAAGGTAAGTCCAGGCATTAATGATCTTTTTTTGATCCAAAAAATGGCACAA 174917 Query 18260 AAACTACTAGAAAAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA 18318 || || ||||||||| || || ||||| ||| || || || ||||||||||||||||| Sbjct 174916 AATGAACCAGAAAAGAAGATGCCTTCAACAGCA-GCAAAAGCGATTAATCTTTCAGCAAA 174858 Query 18319 ACTGTATTTATTGCTCAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACG 18377 || || ||| || | || |||| || |||||| | ||| ||| | Sbjct 174857 --TGAATC-ATT-CTAATTAATCCACTTCATTGCCCACATTGCTTTTTTTTGTATAACAG 174802 Query 18378 GTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGT 18437 | | | | || ||||||| | | || || |||||| || ||| |||| ||||||| Sbjct 174801 GAACATTGTCAATAGCATGTAGAAGATAATTTTTTTCATTTTCATCAGTTATGTAAGTGT 174742 Query 18438 CGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAA 18497 | || || | |||||| |||| |||||||| | ||||||||||| | || | ||||| Sbjct 174741 CAATCAAAAGAGAATAAGTTTCTGAATGTATATTCTCCATAGCTATTTAGAATCCATAAA 174682 Query 18498 ACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTA--CCAAATTCTCATT 18555 | |||| || || ||| ||||| || || ||||| | ||| | | || ||||| Sbjct 174681 AACATCTGGCTTCTGGAATTTGAACTTCAGTACAAAAT--TACTAAGCTAGGTTTTCATT 174624 Query 18556 AACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTC 18612 || ||||| ||| | ||| || || || | ||||| || || ||||||||||| Sbjct 174623 TACAATACCATCACTTGCTGCAAAGAAAGCAAGGACATACTTTATAAAATGTTTTTC 174567 >seq75 Length=370783 Score = 291 bits (322), Expect = 1e-73 Identities = 528/762 (69%), Gaps = 20/762 (3%) Strand=Plus/Plus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 |||||||| ||| ||||| ||| || | ||||||||||| || || |||| ||||||||| Sbjct 196169 AGCTTTTTAGTAATCTCCTACTCTTCTTTCGAAGAAATTAGTTTTACCTTACAATGATAT 196228 Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTAT-TAATTCGT 17978 | || ||| | ||||| ||||| | | || || |||||| || | |||| | Sbjct 196229 CATATCCATCCATTCAAAAGGATTCTTTGAATTGTA-TATTTTAGGTGCACCTAATGCAA 196287 Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 ||| || ||||||||| |||||||| | ||||| | ||| |||| ||||||| || | Sbjct 196288 ATATTAGTCTATCTGCAACAAATTCAATATATTATTTCATTAAATTAGAATTCATTCCAA 196347 Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098 || | || |||| ||| || | ||||||||||| || || ||||| | | || Sbjct 196348 TTAATTCGACTGGTAAAGCTTCGCTTATAAATTCTTTTTCAATTTCAACTGCGGATGATA 196407 Query 18099 TTATGTTTATTAC--CCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAA 18156 | || || || | | | |||| ||||||||| | || ||| || ||| | | Sbjct 196408 TAAT-TTCATGAATTCGTTGATTACT-CAATTTATTTACTAAGTGTTTGTAA---AGAAG 196462 Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| ||||||||||| || | |||||||||||| || |||||||| || ||| |||| Sbjct 196463 ACAAGCAAAATCAGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTTAG 196522 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGC-GAAACT--ACTAGAAAA 18273 || ||||| | ||| ||||||| ||| ||||| ||| ||| | || |||||| Sbjct 196523 TCCTGGCATCAATGATCTCTTTTTTATCCAGAATAT---TGCACAAAATGAACCAGAAAA 196579 Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGC 18332 ||| ||||| ||||| ||| || || || ||||||||||||||||| || || | | Sbjct 196580 GAAAATACCTTCAACTGCA-GCAAAAGCAATTAATCTTTCAGCAAATGAGTCATTTTAGT 196638 Query 18333 TCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAG 18392 | ||||||||| ||||| | ||| ||| || | | | || |||| Sbjct 196639 T---TATCCATTTCATAGCCCACATTGCTTTCTTTTATATAACAGGCACATTATCAATAG 196695 Query 18393 CATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAAT 18452 ||| || | | || |||||| || ||| | |||||||| || ||||| | || | Sbjct 196696 CATGAAGAAGGTAATTTTTTTCATTTTCATCAGTAATATAAGTATCAATTAAAAGTGAGT 196755 Query 18453 ACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG 18512 | |||| || || || ||||||| ||||| | ||| | |||||| |||| || || | Sbjct 196756 AAGTTTCTGAGTGAATATTTTCCATTGCTATTTAAAATCCATAAAAACATCTTGCTTCTG 196815 Query 18513 GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAG 18572 || ||||| || || | ||| || ||||||| ||||| || || || ||| | Sbjct 196816 GAACTTGAACTTCAGTACAGAATTATTAAGCCAAATTTTCATTCACAATGCCATCACTTG 196875 Query 18573 ATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCAT 18614 ||| || || || | ||||| || || || |||||||||| Sbjct 196876 CTGCAAAGAAAGCAAGCACATACTTTATAAAGTGTTTTTCAT 196917 >seq21 Length=592296 Score = 134 bits (148), Expect = 2e-26 Identities = 200/283 (71%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 155769 TAATAGAGAAACaataaagtatttattgtttataataaaaatttatgtaataaaatgcaa 155828 |||| ||||| || ||| || ||| | || || ||||| || | ||||| ||| || Sbjct 450142 TAATCTAGAAATAAAAAATTAATTAAAGATTTTATTAAAATTTAA---AATAATATGTAA 450198 Query 155829 atatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAAT 155888 || ||| ||||||| |||| ||||| || || || | || || || || || | Sbjct 450199 ATTTTTGTTAAAACCCTGACGGGAAAGACCATCACTCTTGATGTAGAGCCATCAGACACC 450258 Query 155889 ATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGA 155948 ||| || ||| ||| || ||||||| ||||| || || || || || ||||| Sbjct 450259 ATTGACGCTGTTAAAGCTAAGATTTAAGATAAGGAAGGAATCCCACCTGATTAATAAAGA 450318 Query 155949 TTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCC 156008 ||||||| ||| || || || || |||||| |||||| | |||||||| ||||| | Sbjct 450319 TTGATTTTTGCAGGAAAACAACTAGAAGATGGAAGAACTCTTTCAGATTACAATATTTAA 450378 Query 156009 AAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 ||||| | || | |||||||| || ||||||||||| |||| Sbjct 450379 AAAGAATCAACCTTACATTTAGTTTTGAGATTAAGAGGTGGTG 450421 >seq56 Length=425007 Score = 120 bits (132), Expect = 4e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| || |||| ||||||||||||||||| || || | || |||||| || Sbjct 240770 AATGTAAATTTTCGTTAAGACATTGACTGGAAAAACAATCACTCTTGACGTCGAACCATC 240829 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 240830 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240889 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| || || ||| | | |||||| ||||| | ||||| ||||| Sbjct 240890 ATAAAGACTCATTTTCGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 240949 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | ||||| | || ||||| ||||| |||||||||||||||||| Sbjct 240950 CATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTAAGAGGCGGT 240998 Score = 113 bits (124), Expect = 7e-20 Identities = 169/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| ||| |||| || ||||||||||| || || || | || || ||| || Sbjct 240314 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 240373 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 240374 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240433 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| |||||| | ||||| ||||| Sbjct 240434 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 240493 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058 || | ||||| | || ||||| ||||| |||||||| ||||| || |||||| || Sbjct 240494 CATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAATGTAAATTT 240552 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| ||||||| |||| || ||||||||||| || || || | || || ||| || Sbjct 54579 AATGTAAATATTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 54520 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 54519 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 54460 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| ||||| | ||||| ||||| Sbjct 54459 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 54400 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || ||||| || ||||||||||| || Sbjct 54399 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 54352 Score = 104 bits (114), Expect = 3e-17 Identities = 167/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| || |||| || ||||||||||| || || || | || || ||| || Sbjct 240542 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 240601 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||| |||||| ||||||| ||||| || || || || | Sbjct 240602 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTA 240661 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| ||||| | ||||| ||||| Sbjct 240662 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 240721 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058 || | ||||| | || ||||| ||||| || ||||| ||||| || |||||| || Sbjct 240722 CATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTT 240780 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| || |||| || ||||||||||| || || || | || || ||| || Sbjct 55841 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 55900 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 55901 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 55960 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| ||||| | ||||| ||||| Sbjct 55961 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 56020 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || ||||| || ||||||||||| || Sbjct 56021 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 56068 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| ||||||| |||| || ||||||||||| || || || | || |||||| || Sbjct 127585 AATGTAAATATTCGTTAAGACCTTGACTGGAAAGACAATCACTCTTGACGTCGAACCATC 127526 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 127525 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127466 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| ||||| | ||||| ||||| Sbjct 127465 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 127406 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || ||||| || ||||| ||||| || Sbjct 127405 CATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 127358 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| || |||| || ||||||||||| || || || | || || ||| || Sbjct 54807 AATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 54748 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| || ||| |||||| |||| || ||||| || || || || | Sbjct 54747 TGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 54688 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||| | | |||||| ||||| | ||||| ||||| Sbjct 54687 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 54628 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAA 156055 || | ||||| | || || || ||||| || ||||| ||||| || |||||| Sbjct 54627 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAA 54572 >seq143 Length=219650 Score = 114 bits (126), Expect = 2e-20 Identities = 182/259 (70%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 155810 tttatgtaataaa--atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTA 155867 ||||| | |||| |||||||| ||| | || || || ||||||||||| || ||| | Sbjct 171669 TTTATATCATAAGTTATGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTT 171728 Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927 || ||||| || || | ||| || ||| |||||| |||| |||||||| Sbjct 171729 GATGTCGAGCCATCAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGA 171788 Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987 ||||| || || | |||| | |||| ||| || || | | |||||| |||||| Sbjct 171789 ATACCACCTGATTAGTAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACT 171848 Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047 | ||||| |||||||| | || || | || ||||||||||| ||||| || ||||| Sbjct 171849 CTTTCAGACTATAATATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGA 171908 Query 156048 GGTGTAAAATTGAATAATT 156066 ||| | ||| | ||| ||| Sbjct 171909 GGTATGAAAAT-AATTATT 171926 >seq28 Length=561789 Score = 111 bits (122), Expect = 2e-19 Identities = 174/248 (70%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 155804 taaaaatttatgtaataaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTAC 155863 |||| ||||| ||||| ||| |||| ||| |||| || | || || || || || || Sbjct 91014 TAAATATTTAA--AATAATATGTAAATTTTTGTTAAGACCCTTACAGGGAAGACCATCAC 90957 Query 155864 ATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGA 155923 | | || || || ||||||| ||| || || || || |||| ||||| Sbjct 90956 ACTTGATGTTGAGCCATCTGATACTATCGATGCTGTTAAGGCAAAGATTTAAGACAAAGA 90897 Query 155924 AGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAG 155983 ||| || || || || || |||||||||||| ||| || ||||| | |||||| || Sbjct 90896 AGGAATCCCACCTGATTAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAAGATGGAAG 90837 Query 155984 AACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAG 156043 |||| | ||||||||||| || | ||||| | || || |||||||| || ||| | || Sbjct 90836 AACTCTTTCAGATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGACTCAG 90777 Query 156044 AGGCGGTG 156051 ||| |||| Sbjct 90776 AGGAGGTG 90769 >seq37 Length=526299 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| ||| |||| || ||||||||||| || || || | || || ||| || Sbjct 195152 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 195211 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || ||| |||||| |||| || ||||| || || || || | Sbjct 195212 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 195271 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||||| | |||||| ||||| | ||||| ||||| Sbjct 195272 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAA 195331 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || ||||| || ||||||||||| || Sbjct 195332 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 195379 Score = 100 bits (110), Expect = 4e-16 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| ||| |||| || ||||||||||| || || || | || || ||| || Sbjct 197468 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 197527 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || ||| |||||| |||| || ||||| || || || || | Sbjct 197528 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 197587 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||||| | |||||| ||||| | ||||| ||||| Sbjct 197588 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAA 197647 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058 || | ||||| | || || || ||||| || ||||| ||||| || |||||| || Sbjct 197648 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTT 197706 Score = 93.3 bits (102), Expect = 6e-14 Identities = 168/241 (70%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAA-AACTATTACATTAGAAGTCGAAGATT 155880 |||| |||| ||| |||| || ||||||||||| || || || | || || ||| | Sbjct 191459 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAACCAT 191518 Query 155881 CTGATAATATTTTAAAC-GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 | || | | | | | || ||| |||||| |||| || ||||| || || || || Sbjct 191519 CAGA-CACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 191577 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || ||||| | |||| ||| || ||||| | |||||| ||||| | ||||| ||| Sbjct 191578 TAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTAT 191637 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAAT 156057 || || | ||||| | || || || ||||| || ||||| ||||| || |||||| | Sbjct 191638 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATT 191697 Query 156058 T 156058 | Sbjct 191698 T 191698 Score = 93.3 bits (102), Expect = 6e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| || |||| || ||||||||||| || || || | || || ||| || Sbjct 196505 AATGTAAATTTTGTTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 196564 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || ||| |||||| |||| || ||||| || || || || | Sbjct 196565 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAAT-CCACCTGATTA 196623 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||||| | |||||| ||||| | ||||| ||||| Sbjct 196624 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAA 196683 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || ||||| || ||||||||||| || Sbjct 196684 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 196731 Score = 93.3 bits (102), Expect = 6e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| |||| ||| |||| || ||||||||||| || || || | || || ||| || Sbjct 197696 AATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATC 197755 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || ||| |||||| |||| || ||||| || || || || | Sbjct 197756 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 197815 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 | ||||| | |||| ||| || ||||| | |||||| ||||| | ||||| ||||| Sbjct 197816 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAA 197875 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || | ||||| | || || || |||| || ||||||||||| || Sbjct 197876 CATTTAAAAAGAATCAACTCTCCA-CTAGTTTTGAGATTAAGAGGTGG 197922 >seq23 Length=588601 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||| |||| ||| |||||||| | || ||||| || ||||| | || || ||| ||| Sbjct 76677 ATGTAAATCTTTGTTAAAACACTCACAGGAAAGACAATTACTCTTGATGTTGAACCATCT 76736 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || ||| |||||| |||| || ||||| || || || || || Sbjct 76737 GATACTATTGATGCTGTTAAAGCTAAAATCTAAGACAAGGAAGGAATCCCACCCGATTAA 76796 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| || || | | ||||| ||||| | ||||| ||||| Sbjct 76797 TAAAGACTTATCTTTGCAGGAAAATAATTAGAAGACGGAAGAACACTTTCAGACTATAAC 76856 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058 || | || || | || || || ||||| || ||||||||||| || |||||| || Sbjct 76857 ATCTAAAAGGAATCAACACTCCACTTAGTTTTGAGATTAAGAGGTGGAATGTAAATTT 76914 >seq25 Length=585425 Score = 96.9 bits (106), Expect = 5e-15 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 155805 aaaaatttatgtaataaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACA 155864 ||||||||| ||||| ||| |||| ||| ||||||| | || || || || || || Sbjct 449878 AAAAATTTAA--AATAATATGTAAATTTTTGTTAAAACCCTCACAGGCAAGACCATCACT 449935 Query 155865 TTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAA 155924 | || || || ||||| | || || || || || |||| || ||| Sbjct 449936 CTTGATGTTGAGCCATCTGACACCATCGATGCTGTTAAGGCAAAGATTTAAGACAAGGAA 449995 Query 155925 GGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGA 155984 || || ||||| || || ||||||| |||| ||| || ||||| | |||||| ||| Sbjct 449996 GGAATCCCTCCTGATTAATAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGAAGA 450055 Query 155985 ACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGA 156044 || | ||||||||||| || | ||||| | || || |||||||| || ||| | ||| Sbjct 450056 ACACTTTCAGATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTTTTGAGACTTAGA 450115 Query 156045 GGCGGTG 156051 || |||| Sbjct 450116 GGAGGTG 450122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731867032418800