Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq147 170 6e-37 seq126 167 7e-36 seq139 158 4e-33 seq163 154 4e-32 seq23 145 2e-29 seq95 141 3e-28 seq46 123 7e-23 seq111 91.5 4e-13 seq74 86.0 2e-11 seq4 84.2 6e-11 >seq147 Length=215461 Score = 170 bits (188), Expect = 6e-37 Identities = 338/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | || | |||||| ||||||| || ||| ||||| || Sbjct 133766 CTATCAAATCTACCTGGTCTTGTAAGTGCTGGATCTAATAATTCTTTTCTATTTGTAGCG 133825 Query 288910 GCCAATACAACAA---TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||||| || ||| || ||| |||||||||||| | ||| | | | Sbjct 133826 GCTAATACAATAACATTAGTATCAGTTCC---AAATCCATCCATTTCTACTAATAACTAA 133882 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | || | || |||||||||||| |||| | || | || |||||| Sbjct 133883 TTCAAAGTATTATCTCTTTCATCATTT---CCTCCT--AT----TTTAGCGTCTCTTTTT 133933 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 |||| || ||||||||||| ||||| || || | || ||||| || | | || | Sbjct 133934 CTACCCACTGCATCAATTTCATCAATAAATATTATACTAGGAGACTTAGCTTTTGCTTAT 133993 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | |||||| | |||||| ||||||| ||||| |||||| Sbjct 133994 TTAAATAAGTCTCTAACCCTACTTGCTCCTACTCCAACAAACATTTCAACAAAATCAGAA 134053 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || |||| || |||||| ||||| ||| | || | | ||| Sbjct 134054 CCACTTACAAAAAAAAATGGAACTCCTGCTTCACCTGCACATGCTTTTGCTACCATTGTT 134113 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||||||||| || ||||| |||||| |||| | |||| |||||| || Sbjct 134114 TTACCTGTTCCTGGAGGTCCTGCTAATAATGCTCCTCTGGGTAATTTTGCTCCCATTTCT 134173 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||||| ||| |||||||||| || |||| ||||| | ||| ||||||| ||| Sbjct 134174 TTATATTTACGAGGTTTCTTTAAAAAATCAACAAATTCCTTTATTTCTAATTTTGCTTCA 134233 Query 289327 TCACATCCTGCTACATC 289343 || ||||||| ||||| Sbjct 134234 TCCAATCCTGCCACATC 134250 Score = 96.9 bits (106), Expect = 1e-14 Identities = 331/505 (66%), Gaps = 22/505 (4%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 ||||| | || |||| | ||| ||||| | ||||||| ||| || | || || ||| Sbjct 46733 CTATCTAGTCTTCCAGGTCTAGTCAATGCAGAGTCTAATTAATCAGCCATATTGGTGGCT 46792 Query 288910 GCCAATACAACAATAG-AT--TCGGTTTGCTTAAATCCATCCATACTTGTTAAA-ATTTG 288965 || ||||||| || | || |||||| || |||||| ||||| | | || | || Sbjct 46793 GCTAATACAATAACATTATGATCGGTT-GC--AAATCCGTCCATT-TCGACAAGTAATTA 46848 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttt 289025 ||| || || | ||| ||||||||| ||| |||| | ||| |||| Sbjct 46849 ATTTAGAGTATTTTCAGATTCATCATT---ACCC----AATCTAGCTTATC-----TTTT 46896 Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 || || | ||||| |||||||| || || || | | ||| |||| | | || Sbjct 46897 CTTTCCTATTGCATCGATTTCGTCGATAAATATAATTGAAGGACTCTTTTATTTAGCTTA 46956 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 | ||||||| ||||| || | ||| || | ||| ||| |||||||||| ||||| || Sbjct 46957 TTCAAATAAGTCTCTAACTCTACTTGCACCTAAACCTACAAACATTTCTACGAATTCTGA 47016 Query 289146 AGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | | ||| | || || | ||| ||||| || || ||| | || | | ||| Sbjct 47017 ACCACTTACATAAAAAAACGGTACTCCAGCTTCACCAGCACATGCTTTTGCTAACATTGT 47076 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 ||||||||||| || || || ||||| |||| |||| | ||| || || | Sbjct 47077 TTTACCTGTTCCTGGAGGACCTGTTAATAATGCTCCTCTTGGGATTTTAGCACCCAATTA 47136 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG-CCT 289324 ||| | || | | | |||| || ||||||| ||| | || || || |||| | | Sbjct 47137 TTTAAACTTTTTACTATTTGTTAAGAAATCTACAAATTCTTTAATCTC-TACTTTGACTT 47195 Query 289325 CATCACATCCTGCTACATCAGCAAA 289349 |||| ||||||||||||| | ||| Sbjct 47196 CATCTAATCCTGCTACATCTGTAAA 47220 >seq126 Length=253074 Score = 167 bits (184), Expect = 7e-36 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| || |||| | ||| | |||||||||||||| || || ||||||||| Sbjct 108583 CTATCAAATCTGCCAGGTCTAGTAAGTGCTGGGTCTAATAATTCCTTTCGATTTGTTGCT 108524 Query 288910 GCCAATACAACAA---TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||||| || ||| || ||| |||||||||||| | ||| | | | Sbjct 108523 GCTAATACAATAACATTAGTATCTGTTCC---AAATCCATCCATTTCTACTAATAACTAA 108467 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || |||||||||||| |||| || || || ||| ||| Sbjct 108466 TTTAATGTATTATCTCTTTCATCATTTCCACCTATTTTTGCA------TCTCTC---TTT 108416 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 |||| || ||||||||||| ||||| ||||| | || ||||| ||| | | || | Sbjct 108415 CTACCGACTGCATCAATTTCATCAATAAAAATTATACTAGGAGATTTTGCTTTTGCTTAT 108356 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | ||| || | || ||| ||||||| ||||| || || Sbjct 108355 TTAAATAAATCTCTAACTCTACTTGCACCTACTCCTACAAACATTTCAACAAAATCTGAT 108296 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || | ||||| ||| ||||| ||||| || | || | | ||| Sbjct 108295 CCACTAACAAAGAAGAATGGAACACCAGCTTCACCTGCACAAGCTTTTGCAACCATTGTT 108236 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 |||||||||||||| ||||| |||||| | |||| |||||| ||| || || Sbjct 108235 TTACCTGTTCCAGGAGGTCCTGCTAATAAAGCTCCTCTTGGTAATTTAGCTCCCATTTCT 108176 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||||| || ||||||| || ||||||| || | | ||| ||||||| ||| Sbjct 108175 TTATATTTTCTTGGTTTCTTTAAGAAGTCTACAAACTCTTTTATTTCTAATTTTGCTTCA 108116 Query 289327 TCACATCCTGCTACATC 289343 || |||| || ||||| Sbjct 108115 TCCAATCCAGCAACATC 108099 >seq139 Length=230683 Score = 158 bits (174), Expect = 4e-33 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | || | |||||| ||||||| || ||| ||||| ||| Sbjct 92980 CTATCAAATCTACCTGGTCTTGTAAGTGCTGGATCTAATAATTCTTTTCTATTTGTAGCT 92921 Query 288910 GCCAATACAACAA---TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||||| || ||| || ||| |||||||||||| | || | | | Sbjct 92920 GCTAATACAATAACATTAGTATCAGTTCC---AAATCCATCCATCTCTACTAGTAACTAA 92864 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || |||||||||||| |||| | | | | ||| |||||| Sbjct 92863 TTCAATGTATTATCTCTTTCATCATTT---CCTCCT-AGT--TTTGCATC---TCTTTTT 92813 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||||||||| || || || || | || ||||| || | | || | Sbjct 92812 CTACCAACAGCATCAATTTCATCGATAAATATGATACTTGGAGATTTAGCTTTTGCTTAT 92753 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | |||||| | |||||| ||||||| ||||| || ||| Sbjct 92752 TTAAATAAATCTCTAACTCTACTTGCTCCTACTCCAACAAACATTTCAACAAAATCTGAA 92693 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || ||||| ||| ||||||||| || ||| | || | | ||| Sbjct 92692 CCACTTACAAAAAAGAATGGTACTCCTGCTTCGCCGGCACATGCTTTTGCTACCATCGTC 92633 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||||||||| || ||||| | |||| | || |||| ||| || || Sbjct 92632 TTACCTGTTCCTGGAGGTCCTGCCAATAATGCACCTCGAGGTAATTTCGCTCCCATTTCT 92573 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 || ||||| ||| | |||||||| || |||| ||||| | ||| ||||||| ||| Sbjct 92572 TTGTATTTACGAGGCTTTTTTAAAAAGTCAACAAATTCCTTTATTTCTAATTTTGCTTCA 92513 Query 289327 TCACATCCTGCTACATC 289343 || |||| |||||||| Sbjct 92512 TCTAATCCAGCTACATC 92496 >seq163 Length=171729 Score = 154 bits (170), Expect = 4e-32 Identities = 332/495 (67%), Gaps = 11/495 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | ||| | ||||| || || | || ||| ||||||||| Sbjct 66713 CTATCAAATCTACCAGGTCTAGTAAGCGCTGGATCCAAAAGTTCCTTTCTATTTGTTGCT 66654 Query 288910 GCCAATACAACAATAGATTCGGTTTGCT-TAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || |||| |||| || | || | |||||||||||| | ||| | || || Sbjct 66653 GCTAACACAATAATA-TTTGTATCTGTTCCAAATCCATCCATCTCTACTAATAATTAGTT 66595 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 | ||| | || ||||| |||||| ||| || || | ||||||| | Sbjct 66594 CAATGTATTATCTCTTTCGTCATTTCCTCCTATTTTTGCATC---------CCTTTTTCT 66544 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 |||||| ||||||||||| ||||| ||||| | || ||||| || | | || | Sbjct 66543 ACCAACTGCATCAATTTCATCAATAAAAATTATACTAGGAGATTTAGCTTTTGCTTGTTT 66484 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| ||||| || | || |||| || ||| ||||||| ||||| || || | Sbjct 66483 AAATAAATCTCTCACTCTACTAGCACCAACTCCTACAAACATTTCAACAAAATCTGATCC 66424 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 ||| | ||||| ||| ||||| ||||| ||| | |||| | ||| || Sbjct 66423 ACTTACAAAGAAGAATGGAACACCAGCTTCACCTGCACAAGCCTTTGCCACCATTGTTTT 66364 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 ||||||||| || ||||| | |||| | || |||| | ||| || || || Sbjct 66363 ACCTGTTCCTGGAGGTCCTGCCAATAATGCCCCTCTTGGCAATTTGGCTCCCATTTCTTT 66304 Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 |||||| || |||||||||| ||||||| ||| | | ||| ||||||| ||||| Sbjct 66303 ATATTTTCTTGGTTTCTTTAAAAAATCTACAAATTCTTTTATTTCTAATTTTGCTTCATC 66244 Query 289329 ACATCCTGCTACATC 289343 |||| |||||||| Sbjct 66243 TAATCCAGCTACATC 66229 Score = 116 bits (128), Expect = 1e-20 Identities = 342/521 (66%), Gaps = 21/521 (4%) Strand=Plus/Minus Query 288847 CTCCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTC-TGTTTGT 288905 || ||||| || || || | | || || ||||| ||||| ||| ||| | || || Sbjct 142276 CTTCTATCGAATCTTCCTGGTCTTGTCAAAGCTGGATCTAACGAATCT-CTCATATTAGT 142218 Query 288906 TGCTGCCAATACAACAATAGATTCGGTTTGCTTA-AATCCATCCATACTTGTTAAAATTT 288964 ||| |||||||| || | || | | | | | ||||||||||| | ||| | || Sbjct 142217 TGCAGCCAATACTACTACAG-TACTATCAGTTCCGAATCCATCCATTTCTACTAATAGTT 142159 Query 288965 GATTAAGTGTTTGTTCCCTTTCATCATTT---GAACCTCTTGAATCACCCGAATCGCTCC 289021 ||| | ||| | || ||||| |||||| || ||| |||||| | | Sbjct 142158 AATTTAATGTATTATCTCTTTCTTCATTTTTTGATCCTTTTGAAT------------TTC 142111 Query 289022 tttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 |||| || || || ||||||||||| ||||| |||| | || |||| ||| | | | Sbjct 142110 TTTTCTTTCCTACTGCATCAATTTCATCAATAAAAACAATACTAGGAGCTTTTGATTTAG 142051 Query 289082 CAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATT 289141 | | ||||||||| | || | | ||||| | |||||| |||||||| ||||||| Sbjct 142050 CTTATTTAAATAATTCACGAACTCTTGCAGCTCCTAAACCAACGTACATTTCAACAAATT 141991 Query 289142 CAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 | || | || | || ||||| ||| |||||| || || ||| | || | | Sbjct 141990 CTGATCCACTAACATAAAAGAATGGTACTCCTGCTTCTCCAGCACAAGCCTTTGCTAATA 141931 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAG 289261 || ||||| |||||||| || || ||||| |||| |||| | | | || || Sbjct 141930 AGGTTTTACCGGTTCCAGGAGGACCTGTTAATAATGCTCCTCTTGGAATTCTAGCTCCTA 141871 Query 289262 CAGACTTATATTTCTCAGG-GCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 |||||||| | || ||| || || || ||||||| ||| || ||| |||| Sbjct 141870 ATTTTTTATATTTTTTTGGTGCT-TTCAAGAAATCTACAAATTCTCTAATTTCTCCTTTT 141812 Query 289321 GCCTCATCACATCCTGCTACATCAGCAAAAGTAATATTAAT 289361 || ||||| ||||||| ||||| ||| | || ||||| Sbjct 141811 GCTTCATCTTATCCTGCGACATCTTTAAATTTTATTTTAAT 141771 >seq23 Length=588601 Score = 145 bits (160), Expect = 2e-29 Identities = 234/330 (71%), Gaps = 10/330 (3%) Strand=Plus/Minus Query 288998 CTCTTGAATCACCCGAATC----GCTCCtttttttACCAACA--GC-ATCAATTTCGTCA 289050 |||| |||| ||| | ||| |||| || || |||| || || ||| ||||| || Sbjct 420209 CTCTAGAATAACCAGGATCTTATGCTC-TTCTTCTACCTCCAATGCTATCTATTTCATCT 420151 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGAT 289110 |||||||| | | || | || | ||| || | |||| |||||| ||||| || Sbjct 420150 ATGAAAATTATTGAGGGTGCTTTCTATCTTGCTGCTTTGAATATTTCTCTAACACGTGAA 420091 Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170 || |||| || ||| ||||||| ||||||||||| | ||| | || || | ||| Sbjct 420090 GCCCCAACTCCCACAAACATTTCATCAAATTCAGAACCTGATTTATAAAAAAAAGC-ACA 420032 Query 289171 TT-TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTC 289229 | |||||| ||||| | ||| || || | |||||| ||||||||||| |||||||| | Sbjct 420031 TCCTGCTTCTCCTGCCAATGCTCTAGCTAAAAGTGTTTTACCTGTTCCTGGTGGTCCTAC 419972 Query 289230 TAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAA 289289 ||||| || ||| || || | ||||| || | | |||| || | ||| ||||||| Sbjct 419971 TAATAAAATTCCTTTAGGCAGCTTTGCTCCTGAATCTGTATACTTTTTTGGGTTCTTTAA 419912 Query 289290 AAATTCTACAATTTCCTCAAGTTCATATTT 289319 |||||||||||||| || | ||| | ||| Sbjct 419911 GAATTCTACAATTTCTTCTAATTCTTCTTT 419882 >seq95 Length=316235 Score = 141 bits (156), Expect = 3e-28 Identities = 291/433 (67%), Gaps = 35/433 (8%) Strand=Plus/Minus Query 288928 TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCA 288987 || |||| |||||||||||||| ||||||||||| ||| | ||| | Sbjct 164087 TCTGTTTATTTAAATCCATCCATCTCTGTTAAAATTTAATTTATTGTGT----------- 164039 Query 288988 TCATTTGAACCTCTTGAATCACCCGAATC----GCTCCtttttttAC--CAACAGCATCA 289041 ||||||||| ||| | ||| |||| | || || | ||| | |||| Sbjct 164038 ----------CTCTTGAATAACCTGGATCTTAAGCTCGTCTTCTTCCTCCAATACTATCA 163989 Query 289042 ATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC---AAATAATTCT 289098 ||||| || || || || | | | |||| ||| ||| || ||| ||||| |||| Sbjct 163988 ATTTCATCTATAAATATTATAGATGGAGCCTTTGCTCTTGC---TGCCTTAAATATTTCT 163932 Query 289099 CTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA 289158 || || | |||||||||| ||||||| |||| || | ||||| ||| | ||| | | Sbjct 163931 CTCACTCTAGATGCTCCAACACCAACAAACATCTCATCGAATTCGGAACCTGATTTATAA 163872 Query 289159 ATGAATGTTACATT-TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCC 289217 | |||| |||| |||||| || || | ||| || |||| ||| || || |||||||| Sbjct 163871 AAAAATGC-ACATCCTGCTTCACCAGCCAATGCTCTAGCCAAAAGGGTTTTTCCTGTTCC 163813 Query 289218 AGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTC 289277 || ||||| | |||| || ||| ||||| | ||||| || | | |||| || | Sbjct 163812 TGGAGGTCCTACCAATAAAATTCCTTTTGGAAGCTTTGCTCCTGAATCTGTATACTTTTT 163753 Query 289278 AGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGC 289337 || ||||||||||||| ||||| || || | ||| | ||| |||||| ||| Sbjct 163752 TGGATTCTTTAAAAATTCCACAATCTCTTCTAATTCTTCTTTAAATTCATCAATTCCCAA 163693 Query 289338 TACATCAGCAAAA 289350 ||||||| |||| Sbjct 163692 TACATCATTAAAA 163680 >seq46 Length=482232 Score = 123 bits (136), Expect = 7e-23 Identities = 195/277 (70%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 289038 ATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTC 289097 ||| ||||| || ||||| || | | | |||| || | ||| ||| ||| | ||| Sbjct 340269 ATCTATTTCATCTATGAATATTATAGATGGAGCTTTCTATCTAGCAGCCTTAAAGATTTC 340210 Query 289098 TCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTG 289157 ||| ||||| |||||||| | || ||| ||||||| |||| || || | ||| | Sbjct 340209 TCTAACACGTGATGCTCCCACTCCTACAAACATTTCATCAAACTCTGATCCTGATTTATA 340150 Query 289158 AATGAATGTTACATTTG-CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTC 289216 || |||| |||| | |||| ||||| | ||| || || | |||||| ||||| || | Sbjct 340149 AAAAAATGC-ACATCCGGCTTCTCCTGCCAGTGCTCTTGCTAAAAGTGTTTTACCAGTAC 340091 Query 289217 CAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCT 289276 | ||||| || |||||| || ||| ||||| | || || || | | ||||||| | Sbjct 340090 CTGGTGGACCTACTAATAAAATTCCTTTTGGCAACTTAGCTCCTGAATCTGTATATTTTT 340031 Query 289277 CAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTC 289313 || | |||||||||||||||||||| || | ||| Sbjct 340030 TTGGATTTTTTAAAAATTCTACAATTTCTTCTAATTC 339994 >seq111 Length=285051 Score = 91.5 bits (100), Expect = 4e-13 Identities = 263/405 (65%), Gaps = 10/405 (2%) Strand=Plus/Minus Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047 |||||||||||||||| | | |||||| | | | |||| || ||||| || | ||||| Sbjct 62117 AACCAGTACCAATACCTTCAGCTCCATTTACTAAACTCATTGGTATAATAGGAACATAAT 62058 Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107 || |||| ||||| | | ||||| |||| || || | || | | || || || Sbjct 62057 AATCTGGTTCAACCATCTATCCATCGTCTTCCAAATACTTCAATAAATGATCATCTTATT 61998 Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTG 60167 | ||||||||| | |||||| || || ||| ||||||| || | ||||| Sbjct 61997 CTGGAAATATATGTCTAGTAATTTTATTTAGAGCTGTAGAAATATATCTTGCAGATGCAT 61938 Query 60168 CGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGT 60227 || || ||||||||| | | ||||| | || ||||| | || |||||| | Sbjct 61937 GATCTTTACCACCCATAGCTCTACTACCAAACTAACCTTTTGGTAAAAGTAAATTAATAT 61878 Query 60228 TGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCACCATTTAAACTGG-----C 60282 | || || || || || |||| || | || | || | || ||||| | Sbjct 61877 TATTGGAACCAACAAAGTTTTATGCCATTCCTATGATTG-----TTGAAACTAGTGATAA 61823 Query 60283 TTCACCGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAAT 60342 || || |||||||| | |||||||| | | ||| |||| | || | | ||||| || Sbjct 61822 ATCTCCATGATGATAAGCTGAATGTTCAGCTATATAACCACCTAGTTATACTACTTTGAT 61763 Query 60343 TTCGGAGTGGAGTTTTTTCTTGAACGCCGAATATACAATTTTCCT 60387 ||| | | || ||| |||| || | | ||| || |||||| Sbjct 61762 TTCTTATTTTAGATTTCTCTTAAAACATGCAAATAAAACTTTCCT 61718 >seq74 Length=372420 Score = 86.0 bits (94), Expect = 2e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 302601 AATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCAT 302660 |||||| |||||| || ||| |||||||||||||||||||||||| | | ||||||||| Sbjct 325589 AATATATCCAGTTCTACTTGTCTTTACAGCTGTATCAATTAGACCATCTCTACCACCCAT 325530 Query 302661 AGCATGGAAGAA 302672 || |||||| || Sbjct 325529 AGTATGGAAAAA 325518 >seq4 Length=867223 Score = 84.2 bits (92), Expect = 6e-11 Identities = 266/405 (66%), Gaps = 18/405 (4%) Strand=Plus/Minus Query 155323 CAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTT-TA--GCCTCCTCAGATGTAA 155379 || ||||||| ||||||||||| |||| | | || || || || ||||| || Sbjct 330228 CATAATAAATGGTCTCAAAGAT---TTTAGAGTTTAATTCTAAGGCATCATCAGAATCAA 330172 Query 155380 ATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGC 155439 ||| || | ||| | | |||| || || || || | ||||||||||| | ||| | Sbjct 330171 ATGGTATTTTCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCAATACCAATTGGTC 330112 Query 155440 GATGCCTGTAATTGCTCCTGCTTGTCTTCTTGTTT----GGGTAAAAATTCACATCAATA 155495 || || | ||| || | ||| ||||||| | |||||||||| ||||||| Sbjct 330111 TATTTCTTTTATTACTA----TATTCTGCTTGTTTAACAGAATAAAAATTCAAATCAATA 330056 Query 155496 ATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAAT 155555 | ||||||||||||| | || || || | ||| ||||||| | | |||||| Sbjct 330055 ACTATATTTAAATTTGTTGTAATTATTTTAGTAATCTCTAATAATTTCTCGAAATCAAAT 329996 Query 155556 GTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTC 155615 |||||||| || || | ||| | | | |||| || |||||||| || ||| | Sbjct 329995 GTTTTATCATCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTACAAACAGCAAT- 329937 Query 155616 TCCTTGTCGTCGCTGT--ATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGC 155673 | | | | || | ||| ||| | ||| ||| ||| | || ||| ||||| || | Sbjct 329936 TTCATCTGGT-GATGTAAATTAAATAATTTCAGTGCATAAATTGCTACTTTTGATAGTTC 329878 Query 155674 CTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATA 155718 | | |||||| | ||| || ||||| ||||| || |||| Sbjct 329877 CAAGATTCTTTTAATTACTCTTTGAATTACATGCATCTTTATATA 329833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807360288991