Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq56 167 4e-36 seq37 163 4e-35 seq143 145 1e-29 seq21 134 2e-26 seq28 113 7e-20 >seq56 Length=425007 Score = 167 bits (184), Expect = 4e-36 Identities = 182/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || ||||||| ||||||||||||| ||||| || |||||| ||||||| |||| || | Sbjct 127811 TGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA- 127753 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 127752 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 127693 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 127692 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 127633 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| |||| ||||| || |||| ||||| || | |||||||| Sbjct 127632 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATATT 127574 Score = 159 bits (176), Expect = 5e-34 Identities = 173/227 (76%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 || ||||||| ||||||||||||| ||||| || |||||| ||||||| ||| ||| | Sbjct 116789 TGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA- 116847 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 116848 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 116907 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 116908 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 116967 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| ||||| || |||| ||||| || Sbjct 116968 ATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 117014 Score = 159 bits (176), Expect = 5e-34 Identities = 173/227 (76%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 || ||||||| ||||||||||||| ||||| || |||||| ||||||| ||| ||| | Sbjct 130914 TGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCA- 130972 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 130973 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 131032 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 131033 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 131092 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| ||||| || |||| ||||| || Sbjct 131093 ATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 131139 Score = 154 bits (170), Expect = 2e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || ||||||| ||||||||||||| ||||| || || ||| ||||||| |||| | Sbjct 55033 TGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCTG 54974 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 54973 ACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAAT 54914 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| | Sbjct 54913 AAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACA 54854 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 54853 TTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 54796 Score = 154 bits (170), Expect = 2e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || ||||||| ||||||||||||| ||||| || || ||| ||||||| |||| | Sbjct 55615 TGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCTG 55674 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 55675 ACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAAT 55734 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| | Sbjct 55735 AAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACA 55794 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 55795 TTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 55852 Score = 154 bits (170), Expect = 2e-32 Identities = 179/239 (75%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| ||| | |||||| | |||||||| ||||| ||| | ||||| |||| || | Sbjct 240088 TGTAAATTTTCGTTAAAACACTCACAGGAAAGACAATCACTCTCGATGTTGAACCATCA- 240146 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || ||| ||||| || ||||| ||| || Sbjct 240147 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTAA 240206 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 240207 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 240266 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || ||||||||||| ||| | || ||||| || |||| ||||| || | ||||| || Sbjct 240267 ATTCAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 240325 Score = 145 bits (160), Expect = 1e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 || |||| ||| | || ||||| || ||||||||||| ||| |||| || ||| ||| | Sbjct 240772 TGTAAATTTTCGTTAAGACATTGACTGGAAAAACAATCACTCTTGACGTCGAACCATCA- 240830 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 240831 GACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 240890 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||| ||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 240891 TAAAGACTCATTTTCGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 240950 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAAT 146262 || |||||||||| || | || ||||| ||| |||||||||| ||| ||| Sbjct 240951 ATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTAAGAGGCGGTTAAT 241002 Score = 141 bits (156), Expect = 1e-28 Identities = 167/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||||||| | || || || || ||||| || || ||| ||||||| |||| | Sbjct 54577 TGTAAATATTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCTG 54518 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 54517 ACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAAT 54458 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| | Sbjct 54457 AAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACA 54398 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||||| ||| |||| ||||| || |||||||||| || Sbjct 54397 TTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 54352 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||| ||| | || || || || ||||| || || ||| ||||||| |||| | Sbjct 54805 TGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCTG 54746 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 54745 ACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAAT 54686 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| | Sbjct 54685 AAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACA 54626 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | |||||||||| ||| |||| ||||| || |||| ||||| || | |||||||| Sbjct 54625 TTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATATT 54568 Score = 141 bits (156), Expect = 1e-28 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||||||| | || || || || ||||| ||||| ||| |||| || |||| || | Sbjct 127583 TGTAAATATTCGTTAAGACCTTGACTGGAAAGACAATCACTCTTGACGTCGAACCATCA- 127525 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 127524 GACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 127465 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 127464 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 127405 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| ||||| || |||| ||||| || Sbjct 127404 ATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 127358 Score = 140 bits (154), Expect = 5e-28 Identities = 176/239 (74%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| ||| | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 240544 TGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 240602 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || ||| ||||| || ||||| ||| || Sbjct 240603 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTAA 240662 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 240663 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 240722 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| | || ||||| || |||| ||||| || | ||||| || Sbjct 240723 ATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 240781 Score = 138 bits (152), Expect = 2e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||| ||| | || || || || ||||| || || ||| ||||||| |||| | Sbjct 55843 TGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCTG 55902 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 55903 ACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAAT 55962 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| | Sbjct 55963 AAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACA 56022 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||||| ||| |||| ||||| || |||||||||| || Sbjct 56023 TTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 56068 Score = 131 bits (144), Expect = 3e-25 Identities = 174/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 240316 TGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 240374 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 240375 GACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 240434 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || ||||||| ||| ||||| | |||| ||||| Sbjct 240435 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATAAC 240494 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| || | || ||||| ||| |||| ||||| || | ||||| || Sbjct 240495 ATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAATGTAAATTTT 240553 >seq37 Length=526299 Score = 163 bits (180), Expect = 4e-35 Identities = 181/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||||||||| ||||||||||||| ||||| || || ||| ||||||| ||| ||| | Sbjct 191233 TGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCA- 191291 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 191292 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 191351 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 191352 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 191411 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 191412 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 191470 Score = 163 bits (180), Expect = 4e-35 Identities = 181/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||||||||| ||||||||||||| ||||| || || ||| ||||||| ||| ||| | Sbjct 194926 TGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCA- 194984 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 194985 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 195044 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 195045 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 195104 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 195105 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 195163 Score = 158 bits (174), Expect = 2e-33 Identities = 180/239 (75%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||||||||| ||||||||||||| ||||| || || ||| ||||||| ||| ||| | Sbjct 197242 TGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCA- 197300 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 197301 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 197360 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 197361 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 197420 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| || |||| ||||| || |||| ||||| || | ||||| || Sbjct 197421 ATTTAAAAAGAATCAACCCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 197479 Score = 136 bits (150), Expect = 6e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 195154 TGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 195212 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 195213 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 195272 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 195273 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 195332 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| ||||| || |||||||||| || Sbjct 195333 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 195379 Score = 136 bits (150), Expect = 6e-27 Identities = 175/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 197470 TGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 197528 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 197529 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 197588 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 197589 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 197648 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 197649 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 197707 Score = 132 bits (146), Expect = 8e-26 Identities = 168/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 196507 TGTAAATTTTGTTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 196565 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 196566 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAAT-CCACCTGATTAA 196624 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 196625 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 196684 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| ||||| || |||||||||| || Sbjct 196685 ATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 196731 Score = 129 bits (142), Expect = 9e-25 Identities = 167/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 197698 TGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA- 197756 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||| ||| |||||| || || ||||| || ||||| ||| || Sbjct 197757 GACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 197816 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 197817 TAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAAC 197876 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||||||||| ||| |||| |||| || |||||||||| || Sbjct 197877 ATTTAAAAAGAATCAACTCTCCA-CTAGTTTTGAGATTAAGAGGTGG 197922 Score = 127 bits (140), Expect = 3e-24 Identities = 175/241 (73%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAA-ACAATTACTATTGATGTAGAAC-ATAA 146089 || |||| || | || || || || ||||| || || ||| ||||||| |||| || | Sbjct 191461 TGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAACCATCA 191520 Query 146090 CGATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCA 146149 || || | | ||| ||| |||||| || || ||||| || ||||| ||| | Sbjct 191521 -GACACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 191579 Query 146150 ACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAA 146209 | ||||||||||||||||||| || |||||||| ||| ||||| | |||| ||||| Sbjct 191580 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAA 191639 Query 146210 TATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || |||||||||| ||| |||| ||||| || |||| ||||| || | ||||| || Sbjct 191640 CATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAATGTAAATTTT 191699 Query 146270 G 146270 | Sbjct 191700 G 191700 Score = 87.8 bits (96), Expect = 3e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAACGATACTATTCAAAA 146104 || || || || ||||| || || ||| ||||||| |||| || | || || || | Sbjct 191703 AAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAACCATCA-GACACAATCGACGC 191761 Query 146105 TGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTT 146164 ||| ||| |||||| || || ||||| || ||||| ||| || ||||||||||||| Sbjct 191762 TGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTT 191821 Query 146165 TGCAGGTAAACAATTAGATGAT 146186 |||||| || |||||||| ||| Sbjct 191822 TGCAGGAAAGCAATTAGAAGAT 191843 >seq143 Length=219650 Score = 145 bits (160), Expect = 1e-29 Identities = 182/247 (74%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 ||||||| || | || || ||||| ||||||||||| || ||||||| || ||| | Sbjct 171685 TGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTTGATGTCGAGCCATCA- 171743 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| |||||| || |||||||| || ||||| ||| | Sbjct 171744 GACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGAATACCACCTGATTAG 171803 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||| || ||||||||||| ||| ||||||| ||| ||||| | |||| |||||| Sbjct 171804 TAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACTCTTTCAGACTATAAT 171863 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT----AAATAAAT 146266 || |||| ||||| || | |||||||| ||| | || ||||||||| |||||| | Sbjct 171864 ATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGAGGTATGAAAATAATT 171923 Query 146267 ATTGAAA 146273 ||| ||| Sbjct 171924 ATTCAAA 171930 >seq21 Length=592296 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 || |||| || | ||||| | || ||||| || || ||| |||||||||| | || | Sbjct 450194 TGTAAATTTTTGTTAAAACCCTGACGGGAAAGACCATCACTCTTGATGTAGAGCCATCA- 450252 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||| ||| ||| || || ||| ||||| || ||||| ||| || Sbjct 450253 GACACCATTGACGCTGTTAAAGCTAAGATTTAAGATAAGGAAGGAATCCCACCTGATTAA 450312 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||| | ||||||||||| |||||| |||| ||| ||||| | ||||||| ||| Sbjct 450313 TAAAGATTGATTTTTGCAGGAAAACAACTAGAAGATGGAAGAACTCTTTCAGATTACAAT 450372 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 || |||||||||| || | |||||||| || |||||||||| ||| Sbjct 450373 ATTTAAAAAGAATCAACCTTACATTTAGTTTTGAGATTAAGAGGTGGT 450420 >seq28 Length=561789 Score = 113 bits (124), Expect = 7e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| || ||||| ||| || ||||| | |||||||| || || ||||| || ||| Sbjct 90901 AAAGAAGGAATCCCACCTGATTAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAAGAT 90842 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 ||||| | |||||||||| || |||||||||| ||| ||||||||||||| || Sbjct 90841 GGAAGAACTCTTTCAGATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGA 90782 Query 146247 TTAAGAGGAGGT 146258 | ||||||||| Sbjct 90781 CTCAGAGGAGGT 90770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786161063895560