Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq75 224 2e-53 seq80 188 2e-42 seq10 150 4e-31 seq4 145 2e-29 seq74 131 4e-25 seq21 123 6e-23 seq172 95.1 3e-14 seq2 87.8 4e-12 seq174 84.2 5e-11 seq144 84.2 5e-11 >seq75 Length=370783 Score = 224 bits (248), Expect = 2e-53 Identities = 510/757 (67%), Gaps = 19/757 (3%) Strand=Plus/Minus Query 131531 GATTGGGAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTC 131590 |||||||||||| |||| |||||||| | ||| | | || ||||| ||||| Sbjct 196939 GATTGGGAAAAACTAACAGCAGATGAAAAACACTTTATAAAGTATGTGCTTGCTTTCTTT 196880 Query 131591 GCCGGAAGTGATGGCATTGTTATTGAAAATCTTG-TTATTAATTTCATTCAAGAAATTGA 131649 || | ||||||||||||||| | ||||||| | | ||| ||||| | | ||| || | Sbjct 196879 GCAGCAAGTGATGGCATTGTGAATGAAAATTTGGCTTAATAATTCTGTACT-GAAGTTCA 196821 Query 131650 TATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGA 131709 |||| |||| || || || || |||| || || | ||| |||||| || Sbjct 196820 AGTTCCAGAAGCAAGATGTTTTTATGGATTTTAAATAGCAATGGAAAATATTCACTCAGA 196761 Query 131710 GATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATT 131769 | || ||| | || ||||| | | | ||| ||||| |||| |||||| | | | Sbjct 196760 AACTTACTCACTTTTAATTGATACTTATATTACTGATGAAAATGAAAAAAATTACCTTCT 196701 Query 131770 TGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGAT 131829 | ||||| | |||| | |||| || ||||||||||| |||||||| |||||||| Sbjct 196700 TCATGCTATTGATAATGTGCCTGTTATATAAAAGAAAGCAATGTGGGCTATGAAATGGAT 196641 Query 131830 TCA---AGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGG 131886 | | |||| || ||| || |||| | | ||||||||| |||||||| Sbjct 196640 AAACTAAAATGACTCA------TTTGCTGAAAGATTAATTGCTTTTGCTGCAGTTGAAGG 196587 Query 131887 TATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCC 131946 ||| |||||||| ||| | || ||||| || || ||| | || ||| | ||||||||| Sbjct 196586 TATTTTCTTTTCTGGTTCATTTTGTGCAATATTCTGGATAAAAAAGAGATCATTGATGCC 196527 Query 131947 TGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 ||||| |||| || ||| |||| || || |||||||||| | |||||||| ||||| Sbjct 196526 AGGACTAACATTTTCAAATGAATTAATTTCAAGAGATGAAGGTCTTCATACTGATTTTGC 196467 Query 132007 TATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAA--TATTAAACAACTT 132064 | | | || | | | || | ||||| |||| | || || ||| | || || Sbjct 196466 TTGTCTTCTTTACAAACACTTAGTAAATAAA-TTGA-GTAATCAACGAATTCATGAAATT 196409 Query 132065 ATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTG 132124 ||| |||||||| || || || || ||||| | |||||||| || | | || Sbjct 196408 ATATCATCCGCAGTTGAAATTGAAAAAGAATTTATAAGCGAAGCTTTACCAGTCGAATTA 196349 Query 132125 ATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAAT- 132183 ||||| |||||| || | | ||||| | || |||||||| ||||| ||| | |||| Sbjct 196348 ATTGGAATGAATTCTAATTTAATGAAATAATATATTGAATTTGTTGCAGATAGACTAATA 196289 Query 132184 TAACCAACTTGGATATTCC-AAGATTTATAACACCCAAAACCCCTATACATGGATGGAGT 132242 | || || | | || || || || || | | || || | | ||||||||| Sbjct 196288 TTTGCA--TTAGGTGCACCTAAAATATACAATTCAAAGAATCCTTTTGAATGGATGGATA 196231 Query 132243 CAATTTCGCTTGAAGGTAAAACGAACTTCTTCGAAAG 132279 || || | |||||||||| || ||||||||||| Sbjct 196230 TGATATCATTGTAAGGTAAAACTAATTTCTTCGAAAG 196194 >seq80 Length=351589 Score = 188 bits (208), Expect = 2e-42 Identities = 510/768 (66%), Gaps = 23/768 (3%) Strand=Plus/Plus Query 131522 GATATTGATGATTGGGAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTT 131581 ||| || | ||||||||||| | || | |||||| ||||| | | || ||| Sbjct 174534 GATCTTAAAGATTGGGAAAAGCTCACTGCAGACGAAAAACATTTTATAAAGTATGTCCTT 174593 Query 131582 GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTG-TTATTAATTTCATTCA 131640 || ||||| || | ||||||||| ||||| | |||||| || | ||| |||||| | | Sbjct 174594 GCTTTCTTTGCAGCAAGTGATGGTATTGTAAATGAAAACCTAGCTTAGTAATTTTGTACT 174653 Query 131641 AGAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTAT 131700 ||| || | ||||| |||| | || || || ||| || ||| | || ||| Sbjct 174654 -GAAGTTCAAATTCCAGAAGCCAGATGTTTTTATGGATTCTAAATAGCTATGGAGAATAT 174712 Query 131701 TCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAA 131760 ||| || | ||||| | |||||||| | | | | ||||| |||| ||||| Sbjct 174713 ACATTCAGAAACTTATTCTCTTTTGATTGACACTTACATAACTGATGAAAATGAAAAAAA 174772 Query 131761 TAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTAT 131820 | | | | ||||| | | || |||||| || |||| |||||| ||||| || Sbjct 174773 TTATCTTCTACATGCTATTGACAATGTTCCTGTTATACAAAAAAAAGCAATGTGGGCAAT 174832 Query 131821 TAAATGGATTCA--AGA-TGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTG 131877 || |||||| | ||| |||||| ||| || |||| | | ||||||||| Sbjct 174833 GAAGTGGATTAATTAGAATGATTCA------TTTGCTGAAAGATTAATCGCTTTTGCTGC 174886 Query 131878 TGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGG 131937 ||||||||| || |||||||| ||| | || ||||| || |||||| | || || | Sbjct 174887 TGTTGAAGGCATCTTCTTTTCTGGTTCATTTTGTGCCATTTTTTGGATCAAAAAAAGATC 174946 Query 131938 ATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATAC 131997 ||| ||||||||||| | || || ||| || | || || |||||||||| | | || || Sbjct 174947 ATTAATGCCTGGACTTACCTTTTCAAATGAACTTATATCAAGAGATGAAGGACTTCACAC 175006 Query 131998 TGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAA--TATT 132055 ||| |||||| | | |||| || || || | | || |||| | || || ||| Sbjct 175007 TGATTTTGCTTGTCTCCTATATA-AACATATGATTAATAAATTGA-GTAATCAACGAATT 175064 Query 132056 AAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCC- 132114 | || |||| ||| ||||| || || || || ||||||| |||||||| || Sbjct 175065 CATTAAATTATTTCATCAGCTGTTGAAATTGAAAAAGAATTTATTAGTGAAGCTTTACCA 175124 Query 132115 -TTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTG 132173 ||| | || || || |||||| || | | ||||| | || || ||||| ||||| | Sbjct 175125 GTTG--AATTAATCGGAATGAATTCTAATTTAATGAAATAATATATAGAATTTGTTGCAG 175182 Query 132174 ATCGTTTAATTAACCAACTT--GGATATTCCAAGATTTATAACACCCAAAACCCCTATAC 132231 || | ||||| | ||| ||| | || || || || | | || || | | Sbjct 175183 ATAGATTAAT--ATTTTCTTTAGGAGCACCTAAAATATACAATTCAAAGAATCCTTTTGA 175240 Query 132232 ATGGATGGAGTCAATTTCGCTTGAAGGTAAAACGAACTTCTTCGAAAG 132279 ||||||||| || || | |||||||||| || ||||||||||| Sbjct 175241 ATGGATGGATATGATATCCTTATAAGGTAAAACAAATTTCTTCGAAAG 175288 >seq10 Length=733974 Score = 150 bits (166), Expect = 4e-31 Identities = 326/480 (68%), Gaps = 21/480 (4%) Strand=Plus/Plus Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAG 110744 || |||||||||| || || || || || || | |||||| || |||| || ||| Sbjct 165682 GTACCAATGTTAAAGGTTTTTAATGATACAGCTAGATATGTAGATTAAGGAGGCGGTAAA 165741 Query 110745 AGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAA--TTCT 110802 ||||| || || |||||||| ||| | || || |||||| || ||||| || |||| Sbjct 165742 AGAAAAGGTTCTTTTGCTATATATTTGGAGCCATGGCAT--AGTGATATTATAAGTTTCT 165799 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 || || | | |||||||| ||| | |||||| |||||||| | |||||||||| | Sbjct 165800 TATAATTAAGAAAAAATCATGGAATAGAAGAATAAAGAGCAAGAGATTTATTTTTAGGTT 165859 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA-AAATGGCATGTGGTCTCTTATG 110921 ||||||| |||||||||||||| || | ||| |||| | | || ||| || | ||| Sbjct 165860 TGTGGATACCAGATTTATTCATGTAAAGAGTTAAAGATGACTAAGAT-TGGACTTTAATG 165918 Query 110922 TGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTAC 110981 || || || | ||| ||||| | ||| |||||| |||| ||| | | | || Sbjct 165919 TGCCCAAATGAATGTCCAGGTCTTTAAGATTGTTATGGATAAGAATTTAACAAGTTGTAT 165978 Query 110982 GAAAAATATG-----AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTT 111036 |||||| ||||| | || || | ||| || ||| | || | | Sbjct 165979 TGTGAATATGAATCTAAAAATATGGGTAGAGTTACAATGAA-----GGCTAGATAATTAT 166033 Query 111037 GGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-T 111095 ||| |||| |||| | || | |||||| || ||||| ||||||||||| | Sbjct 166034 GGTAAGAAATTATTGATGCTTAAATCTCTACTGGATTGCCATATATGTTGTATAAAGATT 166093 Query 111096 CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||| |||| ||| |||| ||| ||||||||||| || ||| ||||||||| ||| Sbjct 166094 CAT-GTAATTAAAAAAGTAATTAAAAAAATTTAGGAACTATAAAGAGTAGTAATTTATGC 166152 >seq4 Length=867223 Score = 145 bits (160), Expect = 2e-29 Identities = 164/217 (76%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGG---TGGTAAG 110744 || |||||||||| || || || ||||| || | |||||| || |||| ||||||| Sbjct 329433 GTGCCAATGTTAAAGGTGTTTAATGACACAGCTAGATATGTAGATTAAGGAGGTGGTAAG 329492 Query 110745 AGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAA--TTCT 110802 ||||| || || |||||||||||| | ||||| |||||| || | ||| || |||| Sbjct 329493 AGAAAAGGTTCTTTTGCTATCTATTTGGAACCATGGCAT--AGTGACATTATAAGTTTCT 329550 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 || || | | || ||||| ||| | |||||| |||||||| | |||||||||| | Sbjct 329551 TATAATTGAGAAAGAATCATGGAATAGAAGAATAAAGAGCAAGAGATTTATTTTTAGGTT 329610 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||||||| |||||||||||||| || | ||| |||| Sbjct 329611 TGTGGATCCCAGATTTATTCATGTAAAGAGTTAAAGA 329647 >seq74 Length=372420 Score = 131 bits (144), Expect = 4e-25 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 305286 AAATTAATGA--TATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAG 305343 ||||||| || |||||| ||| ||| | ||| |||| ||| |||||||||| Sbjct 324326 AAATTAAGGAGTTATTGTAGAGAGATGTTTATAGGACGGAGATTTTGTTTTGTTCAATAG 324385 Query 305344 GCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATT 305403 ||||| || | |||| |||| |||||||| ||||| ||||| | | ||| || | Sbjct 324386 ATAACCAACATTACATAGAATGAGTATGATGGGTCATAGAGTCAGAATCTTACCTTATTC 324445 Query 305404 GACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGA 305463 ||||| |||| ||| || || ||||| || || ||||| ||||||||||||||||| Sbjct 324446 AACATTCAGATTGAATTTATCTGTGTGTACACCATACAATGCAGATTTTGATGGAGATGA 324505 Query 305464 AATGAATATGCATGTACCTCAATC 305487 |||||||||||| || ||| |||| Sbjct 324506 AATGAATATGCACGTTCCTTAATC 324529 >seq21 Length=592296 Score = 123 bits (136), Expect = 6e-23 Identities = 838/1320 (63%), Gaps = 87/1320 (7%) Strand=Plus/Minus Query 279055 TAAATTATATGGTATTCCAAAACTTGATGATGCAAACTGGGCTGGAGGTCGTAA-ATCTC 279113 ||||||| ||||||| ||| | ||||||||||| ||||| | || | ||| Sbjct 14072 TAAATTACATGGTATAGAAAAGTTAGATGATGCAAATGATGCTGG---TAAAAAGAACTC 14016 Query 279114 AAGAAT---GTGCTTTATTTCTTACTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTG 279170 | |||| || | ||| | | || || |||||||| || |||| || || || | Sbjct 14015 A-GAATTTTGTACCTTAATATTAACAGAAGGAGATTCAGCAAAAGCATTGGCTATGGCAG 13957 Query 279171 GTTTATCTGTTATTGGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTA 279230 | || | || |||| | |||| ||||| ||||||||||||| || ||| || | | Sbjct 13956 GAATAGATATTGTTGGAAGAGATAGGTATGGAGTATTTCCTTTAAAGGGAAAATTATTGA 13897 Query 279231 ATGCTCGTGATAAAATCACAACACAGGCTGGTTTAAAGCAAGTAAATGCTAATGCTGAAT 279290 ||| | | | || || ||| |||| || | | | |||| || Sbjct 13896 ATG----TAAGAGAAGCAT----CAG-------TAAAATAAATTATGGAAAATGAAGAGA 13852 Query 279291 TGATTAATTTAAAACAAATATTGGGATTAGAGCAAGGTAAAAAATACAAAGATACATCAA 279350 | ||||||| |||| | |||||| | ||| || | |||| | |||| |||| Sbjct 13851 TACAAAATTTAATTAAAATTATAGGATTATAAAAAGATAGAGAATATATTGATA--TCAA 13794 Query 279351 GT--TTACGATATGGTAAAATTATTATTTTGACAGACCAAGATTTAGATGGAAGTCACAT 279408 | ||| |||||||| | |||| || ||||||| |||| ||||||| || || Sbjct 13793 ATCCTTAAGATATGGTGCAGTTATGATAATGACAGATTAAGACATAGATGGTTCACATAT 13734 Query 279409 TAAAGGATTAATACTTAATTGGGTTGATACTTTCTGGCCAGAATTGTTGAAT--CAAA-- 279464 |||||||| ||| | |||| | || ||| |||||| ||||||||| |||| Sbjct 13733 AAAAGGATTGATAATCAATTTTATCCATCATTTTTGGCCATCATTGTTGAAATACAAAGG 13674 Query 279465 ATTTTGTAAGTGTGTTTCAAACACCAATTATTAAGGCAACTAAAGGTAAAAAAGAAGAAG 279524 |||| ||| | |||| || || | ||||| ||| |||||||||| || | || Sbjct 13673 ATTTCTTAAA-GAGTTTGTCACTCCTTTAATTAAAGCATCTAAAGGTAATTAA--ACAAT 13617 Query 279525 TATTTTATTCATTGCAGAAGT-TTGAACAA---TGGAAAGATTCAGTTGAGA-ATTCAGC 279579 | ||| || | | ||| || || || || ||||||| ||| ||| | Sbjct 13616 TCCTTTTTTTACAGTTTAAGACTTTAATAAGTTTGCTTAGATTCA----AGATATTAAA- 13562 Query 279580 CTCATTCCATACCAAGTATTTTAAAGGTTTAGCAACATCCAATACTAAGGAAGCAAAAGA 279639 |||| | | || || | ||||||||||| |||||| || | || ||| |||| Sbjct 13561 -TCATGGAAAATAAAATACTATAAAGGTTTAGGAACATCTGATGATGTAGAGGCATAAGA 13503 Query 279640 ATATTTTAAAAAATTA---ACACTTCAGA---ATTTTA---ATGCTAATGAGAA--ATCA 279688 |||||||||||| ||| || | | || | |||| ||| || ||| | || | Sbjct 13502 ATATTTTAAAAACTTAGTTACTCATACGATATAATTTAGATATGATAGTGAAGATGATGA 13443 Query 279689 ACTAATGCTCTTGATAAAGCTTTCAACAAATCTCGTGCTGATGATCGTAAAAACTGGTTG 279748 | ||| | | ||| | ||| || || ||| ||||| | ||| | |||||| Sbjct 13442 TC-AAT-CAATCGATTTATGTTTTAATAAGAAAAAAGCTAATGATAGAAAATAATGGTTG 13385 Query 279749 AGAAATTATGATAAGGATGATATAA-TTGATGA-----AGAACAAACTAATGTGACTTGT 279802 | | ||| || | ||| |||| ||||| | |||| || || || | | Sbjct 13384 GCATAATATAATCATGATT-TATATGTTGATCATACATAGAAGGAATTAG---GA--TAT 13331 Query 279803 GAAGAATTTATTGATAAAGAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATT 279862 |||| |||||| |||||||||| || |||||||||| |||| | | | || ||| Sbjct 13330 TAAGACTTTATTCATAAAGAACTTATTCATTTTTCTATGGCTGATAATATTAGATCAATT 13271 Query 279863 CCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAA 279922 ||| | ||||||||||| ||||| | | ||| || |||| |||||||| Sbjct 13270 CCTTCAATGATGGATGGTTTAAAACCCGGTTAAAGAAAGGTTTTATTTGCATGTTTCAAG 13211 Query 279923 AGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCA 279982 || || || | ||||||| |||| | | |||| ||| ||| | |||||||| || Sbjct 13210 AGGAATTTAAAACAGGAAATAAAAGTTGTTTAATTAGGAGGATATATAGCAGAACATTCA 13151 Query 279983 GGTTATCATCACGGTGAAGCGTCTCT----TCAAGGTGCTATTGTAGGTCTTGCCCAAGA 280038 | |||||||| ||||| ||| | |||| |||| | ||| | || || | Sbjct 13150 GCATATCATCATGGTGATATATCTTTAGTATCAA----CTATAATTGGTATGGCTTAAAA 13095 Query 280039 TTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTAT 280098 ||| | | ||||| ||| | || | | | ||| | ||| |||||||| | | Sbjct 13094 CTTTGTTGGATCAAATAACATTAACTTATTATTACCTAGAGGTTAATTTGGTAGTAGGGC 13035 Query 280099 TCACAATGGAAAAGATCATGGTAGTGCTCGTTACATACATACATGTCTTTCA--GATATT 280156 | || || ||||||| | ||| | || || ||| |||| | | ||| Sbjct 13034 TATGGGAGGTAAGGATCATGCTTCTGCCAGATATATTTCAACA--GCTTTAAATAAAATT 12977 Query 280157 ACAAACAAGTTATTTATC--AATTCTGATAATGCTTCATTAGAGTGGCTAGAGGATGATG 280214 || | | ||| |||| | | ||| || | ||| | | | || ||||||| Sbjct 12976 ACTA--GATATATCTATCCAGAGTAAGATGATCATATCTTAAAATATATTGAAGATGATG 12919 Query 280215 GTCTTGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTG 280274 | ||||||| |||||||| ||||| || ||||||| | |||||||| | Sbjct 12918 GAGAAATGGTTGAACCTGAATATTATGTACCAATCATTCCTATGAGCTTGGTTAATGGAG 12859 Query 280275 CTCAAGGAATTGGAACAGGTTATTCTACATCTATCCCAATGTACAATCCAATTGATATTA 280334 || ||||||| || ||||||| || || ||||| || || |||||||| || |||| Sbjct 12858 CTGAAGGAATCGGTACAGGTTGGTCAACTTCTATTTAAAATTATAATCCAATAGA-ATTA 12800 >seq172 Length=140789 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 167249 ACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTACG 167308 ||| | |||||| |||||| |||||| ||||||||||| | |||||||||| | Sbjct 45304 ACCTGAATTATCAAATTCACCACAATAATTAGGTGCTGAAAAGATGGTAACTAATTACCT 45363 Query 167309 ATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTC-AA 167367 ||| ||| ||||||||||| ||||||||||||| ||| || | ||||| || || Sbjct 45364 TTTGGCAAAGAATTCATAACCTTCTTCAACAACTTGATGAGCTCTACAAACAAGATCTAA 45423 Query 167368 CTCCTAtttttttAAGAAA 167386 || | ||| ||||||||| Sbjct 45424 ATCATTTTTCTTTAAGAAA 45442 >seq2 Length=1100274 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 167249 ACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTACG 167308 ||| | |||||| |||||| |||||| || |||||||||| || ||||||| || Sbjct 557999 ACCTGAATTATCAAATTCACCACAATAATTGGGAGCTGAAAATAAGGTTACTAATTATCG 558058 Query 167309 ATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACGTATTAC-AAGTTCAA 167367 || ||| ||||||||||| ||||||||||||| ||| || | ||| || | || Sbjct 558059 TTTTGCAAAAAATTCATAACCTTCTTCAACAACTTAATGTGCTCTACATACTAAATCCAT 558118 Query 167368 CTCCTAtttttttAAGAAAATTAGTTAAAGCACGTAATCCAAATTTATA-ACTACAACCT 167426 || | ||| |||||| ||||| | || || | ||||||| |||| ||| ||| Sbjct 558119 ATCATTTTTCTTTAAG-AAATTTGCTATCACATCTGTTCCAAATATATATGATAC-TCCT 558176 Query 167427 CTTTCA 167432 |||||| Sbjct 558177 CTTTCA 558182 >seq174 Length=114825 Score = 84.2 bits (92), Expect = 5e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 167273 ATAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAATAATTCATAACCATC 167332 |||||| |||||||| || | ||||||||||| | || || ||||||||||| || Sbjct 74416 ATAATTGGGTGCTGAGAAGATAGTAACTAATTATCTCTTTGCGAAGAATTCATAACCTTC 74357 Query 167333 TTCAACAACTTCATGGGCACGTATTACAAGTTC-AACTCCTAtttttttAAGAAAATTAG 167391 ||||||||||| ||| || | ||||| || || || | ||| |||||| ||| ||| Sbjct 74356 TTCAACAACTTAATGAGCTCTACAGACAAGATCTAAGTCGTTTTTCTTTAAG-AAACTAG 74298 Query 167392 TTAAAGCACGTAATCCAAATTTATAACTACAACCTCTTTC 167431 | | || | ||||||| ||||| | |||||||| Sbjct 74297 AAATAACATCTGGTCCAAATATATAAGAAACTCCTCTTTC 74258 >seq144 Length=219168 Score = 84.2 bits (92), Expect = 5e-11 Identities = 145/204 (71%), Gaps = 10/204 (5%) Strand=Plus/Plus Query 227219 TAAATATTGGTGATATAGTGCATCGAAATTTAATTGATGATGATTTTATAATTGTGAATC 227278 |||| |||||||||||||| || || |||| | || ||| || ||||| | |||| Sbjct 38184 TAAAGATTGGTGATATAGTAGATAGACATTTGTTATCAGAAGATATTGTAATTTTTAATC 38243 Query 227279 GTCAGCCATCATTACATAAAAAATCAATATTATGTCAT--CGTGTTAGAATCCATAAG-G 227335 |||| || |||||||||| || || ||| ||| ||| | | |||| | ||||| | Sbjct 38244 GTCAACCTTCATTACATAGAATTTC--TATGATGGCATTCAGAGCTAGAGTAGATAAGTG 38301 Query 227336 ATTTAGCAATTAGATTGAATCCTAATGTGACAGAGGGC--TATAATGCAGATTTTGATGG 227393 || | ||||||| || | |||||| | | | |||||| ||||||||||| Sbjct 38302 GCATA-CTCTTAGATTTAA--CGAATGTGTGTGTACACCATTTAATGCCGATTTTGATGG 38358 Query 227394 AGATGAAATGAATGTCCATATACC 227417 |||||||||||| | ||| |||| Sbjct 38359 TGATGAAATGAATATACATTTACC 38382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804543120823