Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25 122 2e-22 seq56 114 3e-20 seq37 105 2e-17 seq28 105 2e-17 seq23 87.8 4e-12 >seq25 Length=585425 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||| || || |||||| | || || || |||||||| |||| | Sbjct 449909 AAAACCCTCACAGGCAAGACCATCACTCTTGATGTTGAGCCATCTGACACCATCGATGCT 449968 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||| |||| || |||||||| || || ||||| | || || Sbjct 449969 GTTAAGGCAAAGATTTAAGACAAGGAAGGAATCCCTCCTGATTAATAAAGATTAATTTTT 450028 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||| |||||||||||||| || | | ||||| ||| || | ||||| || Sbjct 450029 GCTGGAAAGCAATTGGAAGATGGAAGAACACTTTCAGATTATAACATCTAAAAAGAATCA 450088 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || | |||||||||||| || Sbjct 450089 ACTCTCCATTTAGTTTTGAGACTTAGA 450115 >seq56 Length=425007 Score = 114 bits (126), Expect = 3e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||||||||| || |||||| | || || ||| || |||||| | || | Sbjct 240102 AAAACACTCACAGGAAAGACAATCACTCTCGATGTTGAACCATCAGACACAATTGACGCT 240161 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| ||| |||| || |||||||| || || ||||||| || || Sbjct 240162 GTCAAAGCTAAA-ATTTAAGATAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTT 240220 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||| | || ||||||||||| || | | || || ||| | || ||||| || Sbjct 240221 TGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTCAAAAAGAATC 240280 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||||||||| | ||||||||| Sbjct 240281 AACTCTTCACTTAGTTTTGAGA 240302 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 206176 ATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACA 206235 |||||| ||||| | || ||||| || |||||| | || || ||| ||||||||| Sbjct 55028 ATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCTGACACA 54969 Query 206236 GTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAG 206294 | || | || ||||| ||| ||| |||| || |||||||| || || |||| Sbjct 54968 ATTGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAG 54910 Query 206295 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 ||| || || || |||||| | || ||||||||||| || | | || || ||| | | Sbjct 54909 ACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTA 54850 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || ||||| ||| | ||||||||| Sbjct 54849 AAAAGAATCAACTCTCCACTTAGTTTTGAGA 54819 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 206176 ATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACA 206235 |||||| ||||| | || ||||| || |||||| | || || ||| ||||||||| Sbjct 55620 ATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCTGACACA 55679 Query 206236 GTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAG 206294 | || | || ||||| ||| ||| |||| || |||||||| || || |||| Sbjct 55680 ATTGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAG 55738 Query 206295 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 ||| || || || |||||| | || ||||||||||| || | | || || ||| | | Sbjct 55739 ACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTA 55798 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || ||||| ||| | ||||||||| Sbjct 55799 AAAAGAATCAACTCTCCACTTAGTTTTGAGA 55829 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| ||||||||| | || | || ||||| Sbjct 54554 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCTGACACAATTGACGCTGTCAAAGCT 54495 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 54494 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 54436 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 54435 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 54376 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 54375 CTTAGTTTTGAGA 54363 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| ||||||||| | || | || ||||| Sbjct 54782 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCTGACACAATTGACGCTGTCAAAGCT 54723 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 54722 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 54664 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 54663 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 54604 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 54603 CTTAGTTTTGAGA 54591 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| ||||||||| | || | || ||||| Sbjct 55866 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCTGACACAATTGACGCTGTCAAAGCT 55925 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 55926 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 55984 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 55985 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 56044 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 56045 CTTAGTTTTGAGA 56057 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| | || | || ||||| Sbjct 240567 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATTGACGCTGTCAAAGCT 240626 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 240627 AAA-ATTTAAGATAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 240685 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || |||||||| Sbjct 240686 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTTCA 240745 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 240746 CTTAGTTTTGAGA 240758 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 206176 ATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACA 206235 |||||| ||||| | || ||||| || || ||| | || || ||| || |||||| Sbjct 127806 ATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCAGACACA 127747 Query 206236 GTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAG 206294 | || | || ||||| ||| ||| |||| || |||||||| || || |||| Sbjct 127746 ATTGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAG 127688 Query 206295 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 ||| || || || |||||| | || ||||||||||| || | | || || ||| | | Sbjct 127687 ACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTA 127628 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || ||||| ||| | ||||||||| Sbjct 127627 AAAAGAATCAACTCTCCACTTAGTTTTGAGA 127597 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || |||||||| |||||| | || || ||| || |||||| | || | || ||||| Sbjct 240795 ACTGGAAAAACAATCACTCTTGACGTCGAACCATCAGACACAATTGATGCTGTCAAAGCT 240854 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || ||||| ||||| Sbjct 240855 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTCGCAGGAAA 240913 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || || ||||| Sbjct 240914 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACACTTCA 240973 Query 206373 CCTTGTTTTGAGA 206385 | | || || ||| Sbjct 240974 CTTAGTCTTAAGA 240986 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 206176 ATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACA 206235 |||||| ||||| | || ||||| || || ||| | || || ||| || |||||| Sbjct 116794 ATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCAGACACA 116853 Query 206236 GTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAG 206294 | || | || ||||| ||| ||| |||| || |||||||| || || |||| Sbjct 116854 ATTGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAG 116912 Query 206295 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 ||| || || || |||||| | || ||||||||||| || | | || || ||| | | Sbjct 116913 ACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTA 116972 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || ||||| ||| | || |||||| Sbjct 116973 AAAAGAATCAACTCTCCACTTAGTCTTGAGA 117003 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 206176 ATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACA 206235 |||||| ||||| | || ||||| || || ||| | || || ||| || |||||| Sbjct 130919 ATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAACCATCAGACACA 130978 Query 206236 GTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAG 206294 | || | || ||||| ||| ||| |||| || |||||||| || || |||| Sbjct 130979 ATTGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAG 131037 Query 206295 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 ||| || || || |||||| | || ||||||||||| || | | || || ||| | | Sbjct 131038 ACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTA 131097 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || ||||| ||| | || |||||| Sbjct 131098 AAAAGAATCAACTCTCCACTTAGTCTTGAGA 131128 Score = 84.2 bits (92), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| | || | || ||||| Sbjct 127560 ACTGGAAAGACAATCACTCTTGACGTCGAACCATCAGACACAATTGATGCTGTCAAAGCT 127501 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 127500 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 127442 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 127441 GTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 127382 Query 206373 CCTTGTTTTGAGA 206385 | | || |||||| Sbjct 127381 CTTAGTCTTGAGA 127369 Score = 84.2 bits (92), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| | || | || ||||| Sbjct 240339 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATTGATGCTGTCAAAGCT 240398 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 240399 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 240457 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 | | || ||||||||||| ||| | | || || ||| | | ||||| || || ||||| Sbjct 240458 GTAATTAGAAGATGGAAGAACTCTTTCAGACTATAACATTTAAAAAGAATCAACACTTCA 240517 Query 206373 CCTTGTTTTGAGA 206385 | | || || ||| Sbjct 240518 CTTAGTCTTAAGA 240530 >seq37 Length=526299 Score = 105 bits (116), Expect = 2e-17 Identities = 159/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || |||||| ||||| | || ||||| || |||||| | || || ||| Sbjct 191229 AAAATG---CAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA 191285 Query 206224 AGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 || |||||| |||| | || ||||| ||| ||| |||| || |||||||| || Sbjct 191286 CCATCAGACACAATCGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACC 191344 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||||||| || || || |||||||| || ||||||||||| || | | || Sbjct 191345 TGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGA 191404 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||| | | ||||| || ||||| ||| | ||||||||| Sbjct 191405 CTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGA 191447 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | || ||||| || |||||| | || || ||| || ||| Sbjct 194928 CAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCAGAC 194987 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| |||| | || ||||| ||| ||| |||| || |||||||| || || | Sbjct 194988 ACAATCGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATA 195046 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||| || || || |||||||| || ||||||||||| || | | || || ||| | Sbjct 195047 AAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGACTATAACAT 195106 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 | ||||| || ||||| ||| | ||||||||| Sbjct 195107 TTAAAAAGAATCAACTCTCCACTTAGTTTTGAGA 195140 Score = 100 bits (110), Expect = 7e-16 Identities = 158/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || |||||| ||||| | || ||||| || |||||| | || || ||| Sbjct 197238 AAAATG---CAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA 197294 Query 206224 AGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 || |||||| |||| | || ||||| ||| ||| |||| || |||||||| || Sbjct 197295 CCATCAGACACAATCGACGCTGTCAAAGCTAAA-ATTTAAGACAAGGAAGGAATCCCACC 197353 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||||||| || || || |||||||| || ||||||||||| || | | || Sbjct 197354 TGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCAGA 197413 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||| | | ||||| || || || ||| | ||||||||| Sbjct 197414 CTATAACATTTAAAAAGAATCAACCCTCCACTTAGTTTTGAGA 197456 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| |||| | || ||||| Sbjct 195177 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCT 195236 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 195237 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 195295 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 195296 GCAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 195355 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 195356 CTTAGTTTTGAGA 195368 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| |||| | || ||||| Sbjct 197493 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCT 197552 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 197553 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 197611 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 197612 GCAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 197671 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 197672 CTTAGTTTTGAGA 197684 Score = 96.9 bits (106), Expect = 8e-15 Identities = 140/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAA-ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGC 206251 || ||||| || |||||| | || || ||| || ||||||||||| | || ||||| Sbjct 191484 ACTGGAAAGTACCATCACTCTTGATGTTGAACCATCAGACACAGTCGACGCTGTCAAAGC 191543 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||| ||| |||| || |||||||| || || ||||||| || || || |||| Sbjct 191544 TAAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAA 191602 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 |||| || ||||||||||| || | | || || ||| | | ||||| || ||||| | Sbjct 191603 AGCAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCC 191662 Query 206372 ACCTTGTTTTGAGA 206385 || | ||||||||| Sbjct 191663 ACTTAGTTTTGAGA 191676 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| |||| | || ||||| Sbjct 196530 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCT 196589 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 196590 AAA-ATTTAAGACAAGGAAGGAATCCA-CCTGATTAATAAAGACTCATTTTTGCAGGAAA 196647 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 196648 GCAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 196707 Query 206373 CCTTGTTTTGAGA 206385 | | ||||||||| Sbjct 196708 CTTAGTTTTGAGA 196720 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || ||||| || |||||| | || || ||| || |||||| |||| | || ||||| Sbjct 197721 ACTGGAAAGACCATCACTCTTGATGTTGAACCATCAGACACAATCGACGCTGTCAAAGCT 197780 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||| |||| || |||||||| || || ||||||| || || || ||||| Sbjct 197781 AAA-ATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAA 197839 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||||| || | | || || ||| | | ||||| || ||||| || Sbjct 197840 GCAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTTAAAAAGAATCAACTCTCCA 197899 Query 206373 CCTTGTTTTGAGA 206385 || ||||||||| Sbjct 197900 -CTAGTTTTGAGA 197911 >seq28 Length=561789 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || ||||| | || || || ||||| || |||| | Sbjct 90982 AAGACCCTTACAGGGAAGACCATCACACTTGATGTTGAGCCATCTGATACTATCGATGCT 90923 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||| |||| ||||||||||| || || ||||| | || || Sbjct 90922 GTTAAGGCAAAGATTTAAGACAAAGAAGGAATCCCACCTGATTAATAAAGATTGATTTTT 90863 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||| |||||||||||||| ||| | | ||||| ||| || | ||||| || Sbjct 90862 GCTGGAAAGCAATTGGAAGATGGAAGAACTCTTTCAGATTATAACATCTAAAAAGAATCA 90803 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||| || | || |||||||| Sbjct 90802 ACTCTCCATTTAGTATTGAGACT 90780 >seq23 Length=588601 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||||||||| || || ||| | || || ||| ||||| || | || | Sbjct 76692 AAAACACTCACAGGAAAGACAATTACTCTTGATGTTGAACCATCTGATACTATTGATGCT 76751 Query 206245 G-TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 | |||||| ||| || |||| || |||||||| || || ||||||||||||| Sbjct 76752 GTTAAAGCTAAA-ATCTAAGACAAGGAAGGAATCCCACCCGATTAATAAAGACTTATCTT 76810 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||| | || ||||| ||||| || | | || || ||| || | || || || Sbjct 76811 TGCAGGAAAATAATTAGAAGACGGAAGAACACTTTCAGACTATAACATCTAAAAGGAATC 76870 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || || ||| | ||||||||| Sbjct 76871 AACACTCCACTTAGTTTTGAGA 76892 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||||||||| || |||||| | || || ||| ||||| || | || | Sbjct 76919 CAAGACACTCACAGGAAAGACAATCACTCTTGATGTTGAACCATCTGATACTATTGATGC 76978 Query 206244 AG-TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 | |||||| ||| || |||| || |||||||| || || |||||||||||| Sbjct 76979 TGTTAAAGCTAAA-ATCTAAGACAAGGAAGGAATCCCACCCGATTAATAAAGACTTATCT 77037 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | || ||||| | || ||||| ||||| || | | || || || || | || || | Sbjct 77038 TTGCAGGAAAATAATTAGAAGACGGAAGAACACTCTCAGACTATAATATCTAAAAGGAAT 77097 Query 206363 CTACTCTTCACCTTGTTTTGAGA 206385 | || |||||| | || |||||| Sbjct 77098 CAACACTTCACTTAGTCTTGAGA 77120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812577851103