Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq143 123 2e-23 seq37 122 8e-23 seq21 109 5e-19 seq56 105 6e-18 seq28 87.8 2e-12 seq23 84.2 2e-11 >seq143 Length=219650 Score = 123 bits (136), Expect = 2e-23 Identities = 176/245 (72%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || ||||| |||||| | ||||| | || ||||| |||| | Sbjct 171684 ATGCAAATTTTTGTCAAGACCTTAACTGGAAAAACAATCACACTTGATGTCGA-GCCATC 171742 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || ||||| || ||||| || ||| | Sbjct 171743 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAAGAAGGAATACCACCTGATTA 171802 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 | |||| || |||| | || ||| || | ||||||| |||| | | || || || Sbjct 171803 GTAAAGGCTTATTTTTGCAGGGAAATAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 171862 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAG----GAAAATGAT 25409 ||| |||| ||||| ||| |||||||||| ||||| |||||||||| |||||| || Sbjct 171863 TATCTAAAAGGAATCAACCCTTCATTTAGTTTTAAGGTTGAGAGGAGGTATGAAAATAAT 171922 Query 25410 CATTC 25414 |||| Sbjct 171923 TATTC 171927 >seq37 Length=526299 Score = 122 bits (134), Expect = 8e-23 Identities = 186/260 (72%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 25147 TTATATAAGTAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAA 25206 |||||| | || |||| || ||| |||||| | ||||||||||||||||| ||||| Sbjct 197217 TTATATTATTAATTTTAAAAGAAA----ATGCAAATATTTGTAAAAACATTAACTGGAAA 197272 Query 25207 ATCGATCACGATCGAAGTCGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTA 25265 | ||||| | || || ||| ||| | || || ||||| || ||| |||||| Sbjct 197273 GACTATCACTCTTGATGTTGAA-CCATCAGACACAATCGACGCTGTCAAAGCTAAAATTT 197331 Query 25266 CCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCG 25325 || || || || || || || ||| | |||||||||||| | || || ||| | | Sbjct 197332 AAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAG 197391 Query 25326 AAGATGATAGA--AATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 |||||| ||| | | ||| || || || ||| |||||||||| ||| | || ||||| Sbjct 197392 AAGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACCCTCCACTTAGT 197449 Query 25384 GTTAAGATTGAGAGGAGGAA 25403 || ||||||||||| |||| Sbjct 197450 TTTGAGATTGAGAGGTGGAA 197469 Score = 118 bits (130), Expect = 9e-22 Identities = 185/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 25147 TTATATAAGTAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAA 25206 |||||| | || |||| || ||| |||||| | ||||||||||||||||| ||||| Sbjct 191208 TTATATTATTAATTTTAAAAGAAA----ATGCAAATATTTGTAAAAACATTAACTGGAAA 191263 Query 25207 ATCGATCACGATCGAAGTCGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTA 25265 | ||||| | || || ||| ||| | || || ||||| || ||| |||||| Sbjct 191264 GACTATCACTCTTGATGTTGAA-CCATCAGACACAATCGACGCTGTCAAAGCTAAAATTT 191322 Query 25266 CCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCG 25325 || || || || || || || ||| | |||||||||||| | || || ||| | | Sbjct 191323 AAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAG 191382 Query 25326 AAGATGATAGA--AATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 |||||| ||| | | ||| || || || ||| |||||||||| || | || ||||| Sbjct 191383 AAGATGGAAGAACACTTTCA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGT 191440 Query 25384 GTTAAGATTGAGAGGAGGAA 25403 || ||||||||||| |||| Sbjct 191441 TTTGAGATTGAGAGGTGGAA 191460 Score = 116 bits (128), Expect = 3e-21 Identities = 173/241 (72%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 25166 TTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTC 25225 ||||| | |||||| | ||||||||||||||||| ||||| | ||||| | || || Sbjct 194916 TTAAAAGAAATGCAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTT 194975 Query 25226 GAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACC 25284 ||| ||| | || || ||||| || ||| |||||| || || || || || || Sbjct 194976 GAA-CCATCAGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCC 195034 Query 25285 GCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTC 25342 || ||| | |||||||||||| | || || ||| | ||||||| ||| | | || Sbjct 195035 ACCTGATTAATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTC 195094 Query 25343 AGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 | || || || ||| |||||||||| || | || ||||| || ||||||||||| ||| Sbjct 195095 A--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGA 195152 Query 25403 A 25403 | Sbjct 195153 A 195153 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||| || || || || ||||| | ||||| | || || ||| ||| | Sbjct 197469 ATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCATC 197527 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || ||||| || ||| |||||| || || || || || || || ||| | Sbjct 197528 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 197587 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| | || || ||| | ||||||| ||| | | ||| || || Sbjct 197588 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 197645 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||| |||||||||| || | || ||||| || ||||||||||| |||| Sbjct 197646 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 197697 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||| || || || || ||||| | ||||| | || || ||| ||| | Sbjct 195153 ATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCATC 195211 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || ||||| || ||| |||||| || || || || || || || ||| | Sbjct 195212 AGACACAATCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 195271 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| | || || ||| | ||||||| ||| | | ||| || || Sbjct 195272 ATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTAT 195329 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || ||| |||||||||| || | || ||||| || ||||| ||||| || |||||| Sbjct 195330 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTAAGAGGTGGCTAATGAT 195387 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAAT-CGATCACGATCGAAGTCGAAGCCAA 25233 ||| || | ||||| || || || || ||||| | | ||||| | || || ||| ||| Sbjct 191460 ATGTAAATTTTTGTTAAGACCTTGACTGGAAAGTACCATCACTCTTGATGTTGAA-CCAT 191518 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | || || |||| || ||| |||||| || || || || || || || ||| Sbjct 191519 CAGACACAGTCGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 191578 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTA 25350 | |||||||||||| | || || ||| | ||||||| ||| | | ||| || || Sbjct 191579 AATAAAGACTCATTTTTGCAGGAAAGCAATTAGAAGATGGAAGAACACTTTCA--GACTA 191636 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||| |||||||||| || | || ||||| || ||||||||||| |||| Sbjct 191637 TAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 191689 >seq21 Length=592296 Score = 109 bits (120), Expect = 5e-19 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 ||| || ||| || | ||||| ||||| | || ||||| | ||||| | || || || Sbjct 450186 AAATAATATGTAAATTTTTGTTAAAACCCTGACGGGAAAGACCATCACTCTTGATGTAGA 450245 Query 25228 AGCCAAC-GATACTATCGA-GCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCG 25285 |||| | || || || || || |||| | || | ||| ||||| || || || || Sbjct 450246 -GCCATCAGACACCATTGACGCTGTTAAAGCTAAGATTTAA-GATAAGGAAGGAATCCCA 450303 Query 25286 CCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC 25345 || ||| | ||||| | |||| | || |||||||| ||||||| |||| | | Sbjct 450304 CCTGATTAATAAAGATTGATTTTTGCAGGAAAACAACTAGAAGATGGAAGAACTCTTTCA 450363 Query 25346 GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||| |||||||||| ||| | |||||||| || ||||| ||||| || Sbjct 450364 GATTACAATATTTAAAAAGAATCAACCTTACATTTAGTTTTGAGATTAAGAGGTGG 450419 >seq56 Length=425007 Score = 105 bits (116), Expect = 6e-18 Identities = 172/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 ||||| | || ||| || | || || |||||| | || ||||| | ||||| |||| | Sbjct 240076 AATTATAAAAAATGTAAATTTTCGTTAAAACACTCACAGGAAAGACAATCACTCTCGATG 240135 Query 25224 TCGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATA 25282 | ||| ||| | || || || || || ||| |||||| ||||| || || || Sbjct 240136 TTGAA-CCATCAGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATC 240194 Query 25283 CCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATG 25340 || || ||| | |||||||||||| | || || || | ||||||| ||| | | Sbjct 240195 CCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTT 240254 Query 25341 TCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAG 25400 ||| || || || |||||||||||||| || |||| ||||| || ||||||||||| | Sbjct 240255 TCA--GACTATAACATTCAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTG 240312 Query 25401 GAA 25403 ||| Sbjct 240313 GAA 240315 Score = 102 bits (112), Expect = 7e-17 Identities = 168/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || ||||| || |||||| | ||||| | || |||||| ||| | Sbjct 240771 ATGTAAATTTTCGTTAAGACATTGACTGGAAAAACAATCACTCTTGACGTCGAA-CCATC 240829 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 240830 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240889 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| || || || || | ||||||| ||| | | ||| || || Sbjct 240890 ATAAAGACTCATTTTCGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 240947 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || ||| |||||||||| || |||| ||||| |||||||| ||||| || |||||| Sbjct 240948 AACATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTAAGAGGCGGTTAATGAT 241005 Score = 100 bits (110), Expect = 3e-16 Identities = 171/242 (71%), Gaps = 7/242 (3%) Strand=Plus/Minus Query 25166 TTAAACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGT 25224 ||||| ||| || || | ||||||||||||||||| ||||| | ||||| | || || Sbjct 55044 TTAAAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGT 54985 Query 25225 CGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 ||| ||| | || || || || || ||| |||||| || || || || || | Sbjct 54984 TGAA-CCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCC 54926 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGT 25341 | || ||| | |||||||||||| | || || || | ||||||| |||| | | Sbjct 54925 CACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTT 54866 Query 25342 CAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| | || || ||| |||||||||| || | || ||||| || ||||||||||| || Sbjct 54865 CAG--ACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGG 54808 Query 25402 AA 25403 || Sbjct 54807 AA 54806 Score = 100 bits (110), Expect = 3e-16 Identities = 171/242 (71%), Gaps = 7/242 (3%) Strand=Plus/Plus Query 25166 TTAAACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGT 25224 ||||| ||| || || | ||||||||||||||||| ||||| | ||||| | || || Sbjct 55604 TTAAAAGACAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGT 55663 Query 25225 CGAAGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 ||| ||| | || || || || || ||| |||||| || || || || || | Sbjct 55664 TGAA-CCATCTGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCC 55722 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGT 25341 | || ||| | |||||||||||| | || || || | ||||||| ||| | | | Sbjct 55723 CACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTT 55782 Query 25342 CAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || ||| |||||||||| || | || ||||| || ||||||||||| || Sbjct 55783 CA--GACTATAACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGG 55840 Query 25402 AA 25403 || Sbjct 55841 AA 55842 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||||||||||||||| ||||| | || || | || || ||| ||| | Sbjct 116788 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 116846 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 116847 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 116906 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| | || || || | ||||||| ||| | | ||| || || Sbjct 116907 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 116964 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || ||| |||||||||| || | || ||||| || ||||||||||| || |||||| Sbjct 116965 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGGCTAATGAT 117022 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||||||||||||||| ||||| | || || | || || ||| ||| | Sbjct 130913 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 130971 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 130972 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 131031 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| | || || || | ||||||| ||| | | ||| || || Sbjct 131032 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 131089 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || ||| |||||||||| || | || ||||| || ||||||||||| || |||||| Sbjct 131090 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGGCTAATGAT 131147 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||||||||||||||| ||||| | || || | || || ||| ||| | Sbjct 127812 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATTACTCTTGATGTTGAA-CCATC 127754 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 127753 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127694 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 |||||||||||| | || || || | ||||||| |||| | |||| | || Sbjct 127693 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 127636 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||| |||||||||| || | || ||||| || ||||||||||| |||| Sbjct 127635 AACATTTAAAAAGAATCAACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAA 127584 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | ||||| || || || || ||||| | ||||| | || || ||| ||| | Sbjct 240315 ATGTAAATTTTTGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCATC 240373 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 240374 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 240433 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||||||||||| | || || || | ||||||| |||| | | || || || Sbjct 240434 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACTCTTTCAGACTATAA 240493 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||| |||||||||| || |||| ||||| |||||||||||||| |||| Sbjct 240494 CATTTAAAAAGAATCAACACTTCACTTAGTCTTAAGATTGAGAGGTGGAA 240543 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || || || || ||||| | ||||| | || || ||| ||| | Sbjct 240543 ATGTAAATTTTCGTTAAGACCTTGACTGGAAAGACCATCACTCTTGATGTTGAA-CCATC 240601 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| ||||| || || || || || ||| | Sbjct 240602 AGACACAATTGACGCTGTCAAAGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTA 240661 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||||||||||| | || || || | ||||||| ||| | | ||| || || Sbjct 240662 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GACTAT 240719 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||| |||||||||| || |||| ||||| || ||||||||||| |||| Sbjct 240720 AACATTTAAAAAGAATCAACTCTTCACTTAGTTTTGAGATTGAGAGGTGGAA 240771 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || || || || ||||| | ||||| | || |||||| ||| | Sbjct 127584 ATGTAAATATTCGTTAAGACCTTGACTGGAAAGACAATCACTCTTGACGTCGAA-CCATC 127526 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || || ||| |||||| || || || || || || || ||| | Sbjct 127525 AGACACAATTGATGCTGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 127466 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 |||||||||||| | || || || | ||||||| |||| | |||| | || Sbjct 127465 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ACTAT 127408 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || ||| |||||||||| || | || ||||| || ||||||||||| || |||||| Sbjct 127407 AACATTTAAAAAGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGGCTAATGAT 127350 >seq28 Length=561789 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 ||| || ||| || | ||||| || || | || || || | ||||| | || || || Sbjct 91004 AAATAATATGTAAATTTTTGTTAAGACCCTTACAGGGAAGACCATCACACTTGATGTTGA 90945 Query 25228 AGCCAAC-GATACTATCGA-GCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCG 25285 |||| | ||||||||||| || ||| |||| | ||| || ||||| || || || Sbjct 90944 -GCCATCTGATACTATCGATGCTGTTAAGGCAAAGATTTA-AGACAAAGAAGGAATCCCA 90887 Query 25286 CCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC 25345 || ||| | ||||| | |||| | || || ||| | ||||||| |||| | | Sbjct 90886 CCTGATTAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAAGATGGAAGAACTCTTTCA 90827 Query 25346 GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || || |||||||||| || | |||||||| || ||| | |||||||| Sbjct 90826 GATTATAACATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGACTCAGAGGAGG 90771 >seq23 Length=588601 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || ||| | || ||||| | ||||| | || || ||| ||| | Sbjct 76905 ATGTAAATTTTCGTCAAGACACTCACAGGAAAGACAATCACTCTTGATGTTGAA-CCATC 76963 Query 25235 -GATACTATCGA-GCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 |||||||| || || |||| | |||| || || || || || || || |||||| Sbjct 76964 TGATACTATTGATGCTGTTAAAGCTAAAATCTAA-GACAAGGAAGGAATCCCACCCGATT 77022 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352 | ||||||| || | | || ||| || | ||||| | |||| || || || | Sbjct 77023 AATAAAGACTTATCTTTGCAGGAAAATAATTAGAAGACGGAAGAACACTCTCAGACTATA 77082 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 |||| |||| ||||| || |||| ||||| || ||||||||||| || |||||| Sbjct 77083 ATATCTAAAAGGAATCAACACTTCACTTAGTCTTGAGATTGAGAGGTGGCTAATGAT 77139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091378921760