Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq80 89.7 6e-13 >seq80 Length=351589 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| ||| | |||||| ||||| | ||| |||||||| | | | || Sbjct 174997 CCTTCATCTCTTGATATAAGTTCATTTGAAAAGGTAAGTCCAGGCATTAATGATCTTTTT 174938 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | |||||| |||||||| || |||||| |||||||||||||| ||| ||||| Sbjct 174937 TTGATCCAAAAAATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCAACAGCAGCAAAA 174878 Query 74889 GCGA 74892 |||| Sbjct 174877 GCGA 174874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212285771400