Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq99 82.4 7e-11 >seq99 Length=47800 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||||||||| | |||||||| || || |||||||| || || ||||| | Sbjct 7175 AATGCAAATATTTGTAAAAACATTAACTGGAAAAACCATCACTCTTGATGTTGAACCATC 7234 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | | ||| |||||| ||||| ||||| | || ||| | Sbjct 7235 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTA 7294 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 | ||||||| || ||||| || || || | |||||| | ||| | | ||||| || Sbjct 7295 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 7354 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || | |||||||| ||||| ||| | || || |||| |||| || Sbjct 7355 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGG 7402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428332361419535