Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq697 82.4 8e-11 >seq697 Length=319182 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGG--CAGTTTCGCCGCCATATTTTGGC 117104 ||||| || || || || ||| |||||||||| || || ||| |||||||||||| Sbjct 147206 GCCTTTGCTGCTGTTGAAGGCATCTTCTTTTCTGGTTCATTTTGT--GCCATATTTTGGA 147263 Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164 |||| ||| | | ||||| || || || ||| || || | || || ||||| | Sbjct 147264 TCAAAAAAAGATCATTGATGCCTGGACTCACCTTCTCAAATGAATTAATTTCAAGGGATG 147323 Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGT 117210 | ||||| ||| |||||||| ||| | |||| ||||||||| || Sbjct 147324 AAGGTCTCCATACAGACTTTGCTTGTCTCCTGTACAAGCATTTAGT 147369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214711152720