Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq580 132 4e-26 >seq580 Length=425387 Score = 132 bits (146), Expect = 4e-26 Identities = 386/589 (66%), Gaps = 4/589 (1%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| |||||||| || || ||||| | || |||||||| || || ||||| Sbjct 402369 TTTCCTTTATTAACAACAAAGAAAGTATTCTTTCGTGGAGTTGTTGAGGAATTGCTATGG 402428 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||| | | ||| |||||| || ||| | || || ||||||||||| ||| Sbjct 402429 TTTTTAAGAGGGAATACAAATGGTAAATTACTTTTGGATAAGGGAGTTAAGATATGGGAA 402488 Query 20164 GCACATGG-ATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 | | |||| | | || ||| ||| | | || ||| || | | | | || || Sbjct 402489 GGAAATGGCACCCGAG-AATATTTGGATACCATTGGTTTATAACATAGATAGGAACATGA 402547 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 || || || || |||||||||||||||||||||||||||||| ||||| || | Sbjct 402548 CTTAGGACCAGTCTATGGATTTCAATGGAGACATTTTGGAGCTAAATATAAGGATTGTTA 402607 Query 20283 CACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAAC 20342 || |||||| ||||||| ||| || | | | |||| | ||| | |||| Sbjct 402608 GACTGATTATTCCAATTAAGGAGTGGATTAAGTGAAGGAGATTATACAATTACTGAAAAA 402667 Query 20343 GAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAAT 20402 || ||| | |||||||| || |||| || ||||| | | ||| | | ||| Sbjct 402668 CAATCCAGATAGTAGAAGAATAATATTATCAGCTTGGAATCCAATTGATTTAAAATAAAT 402727 Query 20403 GGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTG 20462 ||| ||||| ||||||||| || | | |||| | || || ||| ||||| || Sbjct 402728 GGCATTGCCACCATGTCATGTGATGTCATAATTCTTTGTGGCAAATGGCAAATTGAGTTG 402787 Query 20463 TCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTA 20522 |||||| | |||| ||| | || |||| |||| ||||||||||| ||||| Sbjct 402788 CATGATGTATTAGAGATCATGTGACTTTGGTTTGGGAATTCCCTTCAATATTGCTAGTTA 402847 Query 20523 TGCGCTGCTTACGTATATGATTGCACATG-TTACAGATTTAAAAACGGGTGACTTAGTCC 20581 ||| |||| || || ||| | ||| | | | || |||| || ||| || || || | Sbjct 402848 TGCATTGCTCACTTACATGTTGGCAAAGGAATGCA-ATTTGAATTTGGGAGAATTTGTTC 402906 Query 20582 ACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630 | ||||||| | |||||||| ||||||| | || ||||||| Sbjct 402907 ATGTTTTAGGAGATACTCATATTTATAGTAATCATGTGGAGGCTTTAAA 402955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399180609056665