Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 6e-12 >seq36 Length=667686 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||||||||| | ||||| ||||||| ||| |||||||| Sbjct 163413 CCACCTCTTAATCTCAAAACTAAGTGGAGAGTAGATTCTTTTTAAATATTATAATCTGAA 163472 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| || || || || ||| | |||| | || ||||| || || Sbjct 163473 AGAGTTCTTCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGTGGA 163532 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG-TTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || | | | || | || | | || | ||||| | |||||||| Sbjct 163533 ATTCCTTCTTTATC-TTAAATCTTAGCCTTGACAGCATCAATGGTGTCTGAAGGCTCCAC 163591 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| || || | ||||| || || |||| |||| Sbjct 163592 ATCAAGTGTGATAGTCTTTCCCGTAAGGGTTTTAACAAAAATTTACATA 163640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059678042400