Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq580 82.4 9e-11 >seq580 Length=425387 Score = 82.4 bits (90), Expect = 9e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083 ||||||||||| || || | | | || |||| |||||||||||| | | || Sbjct 402748 ACATGACATGGTGGCAATGCCATTTATTTTAAATCAATTGGATTCCAAGCTGATAATATT 402689 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATT--TTGTTATAATTATTTGTAATTGATCTA 7141 || | |||| || |||||| |||||| | | |||| ||||| | | || ||| | Sbjct 402688 ATTCTTCTACTATCTGGATT-GTTTTTCAGTAATTGT-ATAATCTCCTTCACTTAATCCA 402631 Query 7142 TACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATT 7201 || | | ||||| ||| | ||||| |||| |||||||||||||||||||||| Sbjct 402630 CTCCTTAATTGGAATAATCAGTCTAACAATCCTTATATTTAGCTCCAAAATGTCTCCATT 402571 Query 7202 GAAACCCATAAATAGGACCTAAATCA 7227 |||| ||||| | || ||||| ||| Sbjct 402570 GAAATCCATAGACTGGTCCTAAGTCA 402545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595866808465200