Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq71 109 1e-18 seq60 95.1 3e-14 seq247 93.3 1e-13 seq502 91.5 3e-13 seq114 91.5 3e-13 seq70 89.7 1e-12 seq386 87.8 4e-12 seq697 84.2 5e-11 seq99 84.2 5e-11 >seq71 Length=215326 Score = 109 bits (120), Expect = 1e-18 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||| || |||||||| | || || | |||||||||||||| Sbjct 118781 TGAAGTGTGGATTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCGTCTTCTAATTAC 118840 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATT 288387 ||||| |||||||| || | |||| |||| |||||||||||| ||||| | |||| Sbjct 118841 TTTCCAGCGAAGATAAGTCTTTGTT---AATCGGGTGGGATTCCTTCCTTATCTTAGATT 118897 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || || || |||| || | ||| || || || ||||| || || || Sbjct 118898 TTAGCCTTAACAGCATCAATAGTGTCAGATGGTTCAACATCAAGAGTGATTGTTTTTCCT 118957 Query 288448 GTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||||||||| || | |||| Sbjct 118958 GTAAGTGTCTTGACGAAGATTTACATT 118984 Score = 104 bits (114), Expect = 6e-17 Identities = 159/223 (71%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||| || |||||||| | || || | |||||||||||||| | Sbjct 119695 TGAAGAGTGGATTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCGTCTTCTAATTAT 119754 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATT 288387 || || |||||||| || | |||| |||| |||||||||||| || || |||||| Sbjct 119755 TTACCAGCGAAGATAAGTCTTTGTT---AATCGGGTGGGATTCCTTCCTTGTCTTGGATT 119811 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || || || || | || | ||| || || || ||||| || || || Sbjct 119812 TTAGCCTTGACAGCATCAATTGTGTCAGATGGTTCAACATCAAGAGTGATTGTTTTTCCT 119871 Query 288448 GTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAATATT 288490 || || ||||| ||||| || | |||| | |||| ||||||| Sbjct 119872 GTGAGTGTCTTTACGAAAATTTACATTGT-TTAT--TAATATT 119911 Score = 102 bits (112), Expect = 2e-16 Identities = 141/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| || |||||||| | || || | |||||||||||||| ||| || ||||| Sbjct 119020 TTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCGTCTTCTAATTATTTACCAGCGAA 119079 Query 288342 GATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | | || |||| |||||||||||| ||||| | |||||| || || || Sbjct 119080 GATAAGTCTTTATT---AATCGGGTGGGATTCCTTCCTTATCTTAGATTTTAGCCTTAAC 119136 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || |||| || | ||| || || || ||||| || || || || || ||||| Sbjct 119137 AGCATCAATAGTGTCAGATGGTTCAACATCAAGAGTGATTGTTTTTCCTGTAAGTGTCTT 119196 Query 288459 GACGAATATCTGCATT 288474 |||||| || | |||| Sbjct 119197 GACGAAGATTTACATT 119212 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| || |||||||| | || || | ||| |||||||||| ||||| || || Sbjct 119248 TTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCAGCAAA 119307 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | | || | | ||||||||||| || || |||||||| || || || Sbjct 119308 GATAAGTCTTTATTAATCAGGGGGGATTCCTTCCTTGTCTTGGATTTTAGCCTTGACAGC 119367 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || | ||| || || || ||||| ||||| || || || |||||||| Sbjct 119368 ATCAATTGTGTCAGATGGTTCAACATCAAGAGTGATAGTCTTTCCTGTGAGTGTCTTGAC 119427 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 119428 GAAGATTTACATT 119440 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/201 (71%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 288278 TGCTTTCTTTTTGGATA-TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || || || ||| ||| ||||| || | ||| || | |||||||||||||| ||| || Sbjct 119473 TGATTCCTCTTTAGATTGTTATAATCTGAGAGTGTTCTTCCGTCTTCTAATTATTTACCA 119532 Query 288337 GCGAAGATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| || | | || |||| ||||||||||| || || ||||| || || Sbjct 119533 GCGAAGATAAGTCTTTATT---AATCGGGGGGGATTCCTTCCTTGTCTTGGATCTTAGCC 119589 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || | || | ||| || || || ||||| ||||| || || || Sbjct 119590 TTAACAGCATCAATGGTGTCAGATGGTTCAACATCAAGAGTGATGGTCTTTCCAGTGAGT 119649 Query 288454 GTCTTGACGAATATCTGCATT 288474 ||||||||||| || | |||| Sbjct 119650 GTCTTGACGAAGATTTACATT 119670 >seq60 Length=234462 Score = 95.1 bits (104), Expect = 3e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| | ||| | ||||| ||| ||| |||||||| ||||| || | || || | ||| Sbjct 128882 TCTCAATACTAAGTGAATTGTGGATTCCTTTTGGATGTTATAATCTCCAAGTGTTCTTCC 128941 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||||||| ||||||||| || || || | | || | | |||||||||||| || Sbjct 128942 ATCTTCTAATTATTTTCCTGCAAAAATTAGTCTTTATTAATCAGGTGGGATTCCTTCCTT 129001 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||||||||||| | ||| | | || || | | | | || || || || || || Sbjct 129002 GTCCTGGATTTTTGATTTAATCATATCAATTGTTTAGTCTGGCTCAACATCAAGAGTAAT 129061 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || | ||| |||| || || || | |||| Sbjct 129062 TGTCTTTCCACTAAGATTCTTTACAAAAATTTACATT 129098 Score = 89.7 bits (98), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || || || | ||| || |||||||| ||||||||||| Sbjct 129134 TTCCTTTTAGATGTTATAATCTTAAAGTGTTCTTCCATCCTCTAATTGCTTTCCTGCGAA 129193 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| ||||| || Sbjct 129194 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGC 129253 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| || | ||| ||||| || || || || ||||| || || || || Sbjct 129254 ATCAATAGTATCTTCTGACTTTACATCGAGAGTAATAGTTTTTCCGGTTAGGGTTTTTAC 129313 Query 288462 GAATATCTGCATTATGTTATTCTAA-TATTTTTA 288494 || || || || || |||||| |||| ||| Sbjct 129314 AAAAATTTGAATCAT----TTCTAATTATTATTA 129343 >seq247 Length=527326 Score = 93.3 bits (102), Expect = 1e-13 Identities = 173/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || | |||||| | ||| | ||| | || ||| |||||||| ||||| || | Sbjct 406069 CCTCCTCTGAGTCTCAATACCAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCTGAA 406010 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| ||||| ||||| ||||| || | | | |||| ||| Sbjct 406009 AGAGTTCTTCCATCTTCCAATTGCTTTCCAGCGAAAATTAATCTTTATTGATCGGGAGGG 405950 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||| ||| || || || || || |||| || | || || Sbjct 405949 ATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTGTCAGATGGCTCAACA 405890 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAA 288486 ||||| ||||| ||||| || || || ||||| || || || | | || ||||| ||| Sbjct 405889 TCGAGTGTGATGGTCTTACCCGTGAGGGTCTTAACAAAAATTTAC---ATATTATTTTAA 405833 Query 288487 TATTTTTAATAA 288498 |||||||| || Sbjct 405832 -ATTTTTAAAAA 405822 >seq502 Length=458689 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 101277 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 101218 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 101217 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 101158 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 101157 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTAC 101098 Query 288462 GAATATCTGCAT---TATGTTATTCTAAT 288487 ||| || | ||| ||| ||||| |||| Sbjct 101097 GAAAATTTACATTTCTATTTTATTATAAT 101069 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 101964 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 101905 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 101904 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 101845 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 101844 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTAC 101785 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 101784 GAAAATTTACATT 101772 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 102423 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 102364 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 102363 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 102304 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 102303 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 102244 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 102243 GAAAATTTACATT 102231 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 102651 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 102592 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 102591 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 102532 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 102531 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 102472 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 102471 GAAAATTTACATT 102459 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 102879 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 102820 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 102819 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 102760 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 102759 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTAC 102700 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 102699 GAAAATTTACATT 102687 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 103107 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 103048 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 103047 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 102988 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 102987 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 102928 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 102927 GAAAATTTACATT 102915 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 103563 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 103504 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 103503 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 103444 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 103443 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 103384 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 103383 GAAAATTTACATT 103371 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 101735 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 101676 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 101675 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 101616 Query 288402 TTCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 || |||| || | | ||| || || || ||||| || || || |||| |||||| | Sbjct 101615 GTCAATAGTGTCTGATGTGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAA 101556 Query 288461 CGAATATCTGCATT 288474 |||| || | |||| Sbjct 101555 CGAAAATTTACATT 101542 >seq114 Length=584889 Score = 91.5 bits (100), Expect = 3e-13 Identities = 175/256 (68%), Gaps = 9/256 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || | |||||| | ||| | ||| | || ||| |||| ||| ||||| |||| Sbjct 475550 CCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCCTTTTAGATGTTATAATCGGAA 475491 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || | ||| || || ||||| ||||| || || |||| | | || |||| || Sbjct 475490 AGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATCAATCTTTATT---AATCGGGA 475434 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||||||| || | ||| || || || || || |||| ||| | || Sbjct 475433 GGGATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCG 475374 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || ||||| ||||| ||||| || || || ||||| || || || | | || ||||| Sbjct 475373 ACATCGAGTGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAAATTTAC---ATATTATTT 475317 Query 288484 TAATATTTTTAATAAT 288499 ||| ||||||| ||| Sbjct 475316 TAAATTTTTTAAAAAT 475301 >seq70 Length=215836 Score = 89.7 bits (98), Expect = 1e-12 Identities = 149/215 (69%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| || |||||||| | || || | ||| |||||||||| |||||||| || Sbjct 1154 TTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 1213 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 1214 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 1273 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || || || ||||| || |||| |||||| || Sbjct 1274 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTAATAGTCTTTCCAGTCAAAGTCTTAAC 1333 Query 288462 GAATATCTGCATTATGTTATTCTAATATTTTTAAT 288496 ||| || | |||| || || ||| ||| |||| Sbjct 1334 GAAAATTTACATT---TTCTTTTAAAATTAATAAT 1365 >seq386 Length=4266 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 366 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 307 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 306 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 247 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 246 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTAC 187 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 186 GAAAATTTACATT 174 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 826 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 767 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 766 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 707 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 706 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 647 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 646 GAAAATTTACATT 634 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 1859 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 1800 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 1799 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 1740 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 1739 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 1680 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 1679 GAAAATTTACATT 1667 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 2547 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 2488 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 2487 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 2428 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 2427 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 2368 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 2367 GAAAATTTACATT 2355 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 2775 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 2716 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 2715 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 2656 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 2655 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 2596 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 2595 GAAAATTTACATT 2583 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 3003 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 2944 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 2943 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 2884 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 2883 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 2824 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 2823 GAAAATTTACATT 2811 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 3236 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 3177 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| || || | ||||| || || || Sbjct 3176 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGC 3117 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || |||| |||||| || Sbjct 3116 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAAC 3057 Query 288462 GAATAT 288467 ||| || Sbjct 3056 GAAAAT 3051 >seq697 Length=319182 Score = 84.2 bits (92), Expect = 5e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTA-TGATCGGTATGAATGCCGATCT 269171 |||||||| |||||| |||| ||| | ||| ||| | | || || |||||| || || | Sbjct 147425 GAAAAAGAATTCATTAGTGAAGCTCTACCA-GTTGAACTTATTGGAATGAATTCCAATTT 147483 Query 269172 CATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAA 269231 ||||| ||||||| ||||| || || ||| | | | ||| | ||| | || Sbjct 147484 GATGAAATAATATATTGAATTTGTAGCAGATAGATTGATATTTGCATTGGGTGCTCCCAA 147543 Query 269232 AGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGAC 269291 | ||||||||||||||||| || | | ||||| | || || | |||| || || Sbjct 147544 GATTTACAATTCGAAGAATCCTTTTGAGTGGATGGATATGATATCTTTGTAAGGTAAAAC 147603 Query 269292 GAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGA 269341 || |||||||||| | || | ||||||||| |||| || |||| Sbjct 147604 CAATTTCTTCGAAAGAAGAGTGGGAGACTATCAAAAAGCTGGAGTCATGA 147653 >seq99 Length=47800 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||| ||| ||||| || | || || | ||| |||||||||| |||||||| || Sbjct 7367 TTCCTTTTAGATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAA 7308 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | |||||||||||| ||||| | ||||| || || || Sbjct 7307 AATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTATCTTAAATTTTAGCCTTGACAGC 7248 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||| || || || ||||| || || || || | || || || Sbjct 7247 GTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTTAATGTTTTTAC 7188 Query 288462 GAATATCTGCATTA 288475 ||||| ||||||| Sbjct 7187 AAATATTTGCATTA 7174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179643865317566