Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq247 129 1e-24 seq70 84.2 5e-11 >seq247 Length=527326 Score = 129 bits (142), Expect = 1e-24 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | |||||||| || |||||||||| ||| || || | | ||| ||| Sbjct 406060 AGTCTCAATACCAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCTGAAAGAGTTCTT 406001 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| |||||||| ||||| || | | | || || ||| |||||||| Sbjct 406000 CCATCTTCCAATTGCTTTCCAGCGAAAATTAATCTTTATTGATCGGGAGGGATTCCTTCC 405941 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||| |||||| ||| || | |||| ||||| | || || ||||| | ||| Sbjct 405940 TTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTGTCAGATGGCTCAACATCGAGTGTG 405881 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTT 199625 || |||||||||||||| || || |||||||||| Sbjct 405880 ATGGTCTTACCCGTGAGGGTCTTAACAAAAATTT 405847 >seq70 Length=215836 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/222 (68%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||||||||| || ||||||| | ||| ||||| | | || ||||| Sbjct 1130 TCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCC 1189 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | | |||||| || || ||||| | | | || || |||||||| Sbjct 1190 ATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTT 1249 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || | ||| || ||| || | || | ||||||| || ||| ||||| | || || Sbjct 1250 GTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACATCAAGAGTAAT 1309 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| || || | ||| || || |||||| |||||||| Sbjct 1310 AGTCTTTCCAGTCAAAGTCTTAACGAAAATT---TACATTTT 1348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178911071861699