Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq247 84.2 2e-11 >seq247 Length=527326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/238 (68%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 38235 TTTaaaaaaaT--GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 38292 ||||||| ||| | |||| || || || || |||||||| || |||||||| |||| | Sbjct 405832 TTTAAAATAATATGTAAATTTTTGTTAAGACCCTCACGGGTAAGACCATCACACTCGATG 405891 Query 38293 TCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352 | ||| | | |||| | | | |||| | ||| ||| ||||| || ||||| | Sbjct 405892 TTGAGCCATCTGACACTATCGATGCTGTTAAGGCAAAGATCTAGGACAAGGAAGGAATCC 405951 Query 38353 CCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCA 38412 | |||| ||| | | | |||| ||| || || || |||| || | | || || Sbjct 405952 CTCCCGATCAATAAAGATTAATTTTCGCTGGAAAGCAATTGGAAGATGGAAGAACTCTTT 406011 Query 38413 ACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||||||||||||| | || || |||||||| || | | ||||| || Sbjct 406012 CAGATTATAACATCCAAAAGGAATCAACTCTCCATTTGGTATTGAGACTCAGAGGAGG 406069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168442244480