Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq613 96.9 4e-15 seq697 84.2 3e-11 >seq613 Length=410769 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 |||||||| ||||||| ||||| | ||||||||| ||| || |||||||| | Sbjct 197634 TGGAGACCTTCATCTCTTGAAATTAATTCATTTGAAAAGGTGAGTCCTGGCATCAATGAT 197693 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 | || || | |||| | ||||| || ||||| || || |||||||| || || ||| Sbjct 197694 CTTTTTTTGATCCAAAATATAGCACAAAATGAACCAGAAAAGAAGATGCCTTCAACAGCA 197753 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| |||| | | || || || || | || | | || ||||||||||||| Sbjct 197754 GCAAAGGCAATCAATCTTTCAGCAAATGAATCA---TTATTATTAATCCATTTCATTGCC 197810 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTT 117525 || | || ||||| | |||| || ||| | | ||||| | | | | ||||| Sbjct 197811 CACATTGCTTTCTTTTGAATAACAGGCACATTATCAATGGCATGGAGAAGATAGTTCTTC 197870 Query 117526 TCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572 ||| | |||| | || || | |||||||| |||||| ||||| Sbjct 197871 TCATTTTCATCGGTTATATAGGTATCAATCAAAAGTGAATAGGTTTC 197917 >seq697 Length=319182 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 |||||||| ||||| | ||||| | ||||||||||||| || || ||||| | Sbjct 147333 TGGAGACCTTCATCCCTTGAAATTAATTCATTTGAGAAGGTGAGTCCAGGCATCAATGAT 147274 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 | || || | |||| | || || || ||||| || || |||||||| || || ||| Sbjct 147273 CTTTTTTTGATCCAAAATATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCAACAGCA 147214 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| |||| | | ||| || || || | || | | ||||||||| ||| Sbjct 147213 GCAAAGGCAATCAATCTCTCAGCAAATGA---ATCATTCTCATTTATCCATTTCATAGCC 147157 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTT 117525 || | |||||||| | |||| || ||| | | || || | | | | |||||| Sbjct 147156 CACATTGCCTTCTTTTGAATAACAGGCACATTGTCAATTGCATGTAGAAGATAGTTCTTT 147097 Query 117526 TCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572 ||| | |||| | ||||| |||| ||||| ||||| ||||| Sbjct 147096 TCATTTTCATCGGTTATGTAAGTGTCTATCAAAAGAGAATAAGTTTC 147050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975659792280