Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq202 98.7 1e-15 seq44 84.2 3e-11 >seq202 Length=539671 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/168 (75%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 126582 GGTCAATTACGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGG 126640 ||||| ||| | || ||| |||| |||||||| ||||| || |||| | |||| || Sbjct 532060 GGTCA-TTAAGAATCCCACAAATCGGAGACAAGTTTTGCAGCAGACATGGAC-AAAAGGG 532117 Query 126641 AACTTGTGGTATGATTTATGCACAAGAAGATATGCCGTTTACACAAT--CAGGTATGACC 126698 ||||||||| |||| |||| |||||||||| | || |||||| | ||| || | Sbjct 532118 AACTTGTGGAATGACTTATCGACAAGAAGATTTACC--TTACACTCTTGTAGGCATTTCT 532175 Query 126699 CCCGATATTATAATTAATCCAAATTGTATACCGTCAAGAATGACCATA 126746 || ||| | | || |||||| ||||||| || ||||||||||||||| Sbjct 532176 CCAGATTTAACTATCAATCCACATTGTATTCCATCAAGAATGACCATA 532223 >seq44 Length=260781 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 |||||||||||||| |||||||||||||||||| | ||||||||||| || |||||| | Sbjct 206315 TACAATGCAGATTTCGATGGAGATGAAATGAATATGCATGTTCCTCAATCATATGAAACA 206374 Query 183056 ACCGCTGAATT 183066 | || ||||| Sbjct 206375 ATAGCAGAATT 206385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658397463662120