Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq613 349 4e-91 seq446 338 7e-88 seq697 324 2e-83 seq69 284 1e-71 seq7 104 3e-17 seq56 89.7 6e-13 seq83 86.0 7e-12 >seq613 Length=410769 Score = 349 bits (386), Expect = 4e-91 Identities = 650/952 (68%), Gaps = 42/952 (4%) Strand=Plus/Plus Query 18656 TCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCT 18715 |||| ||||| |||||| || || |||||||| |||| |||||||||||||| || | Sbjct 197314 TCATAACTCCAGCTTTTTGGTAGTCTCCAACTCTTCTTTCGAAGAAATTAGTTTTACCTT 197373 Query 18716 CTAATGATATACAT-TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAAT 18774 ||| ||||| ||| ||||| | ||||| ||||| ||| ||| || || || | Sbjct 197374 ATAAGGATAT-CATATCCATCCATTCAAAAGGATTCTTTGAATTGTAGATCTTAGGAGCT 197432 Query 18775 CCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAA 18834 || ||| | |||| | |||||| || || |||| ||||||| ||||||| || || Sbjct 197433 CCCAATGCAAATATCAATCTATCTGCAACGAATTCAATATATTATTTCATCAAATTGGAA 197492 Query 18835 TTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACT 18894 |||||||| |||| || ||| |||| || || | | ||||||| ||| || | || Sbjct 197493 TTCATTCCAATTAGTTCAACTGGTAAAGCTTCACTGATGAATTCTTTTTCAATTTCAACA 197552 Query 18895 GCCTCTGATATAATAGATACAACTCTATCTTCATTAGG-AGGGTATAGA--AGATGTTTA 18951 || || || || ||||| || | || | ||| | | |||||| Sbjct 197553 GCAGAAGAAATGATTTCATGAACTCG---TTGAATACTCAACTTATTAATCATATGTTTG 197609 Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 | | | ||| ||||| || ||| || || || ||||| || |||||||| ||| Sbjct 197610 TAAAGAAGACAAGCAAAGTCTGTATGGAGACCTTCATCTCTTGAAATTAATTCATTTGAA 197669 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | || ||||||| | ||||||||| | ||| ||||||| | |||||| ||| Sbjct 197670 AAGGTGAGTCCTGGCATCAATGATCTTTTTTTGATCCAAAATATAGCACAAAATGAACCA 197729 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 |||||||| || ||||| || || ||||| |||| | |||||| || | | |||| Sbjct 197730 GAAAAGAAGATGCCTTCAACAGCAGCAAAGGCAATCAATCTTTCAGCAAAT---GAATCA 197786 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 ||||||| ||||||||||| |||||| || ||||||| | | |||| | || Sbjct 197787 TTATTATTAATCCATTTCATTGCCCACATTGCTTTCTTTTGAATAACAGGCACATTATCA 197846 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 || | || | ||||| | ||||| | ||| | | ||| | ||| ||||| || Sbjct 197847 ATGGCATGGAGAAGATAGTTCTTCTCATTTTCATCGGTTATATAGGTATCAATCAA--AA 197904 Query 19252 CTGTACA--TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309 || | | ||||||| ||||| || || ||||| || | |||||| || || ||||||| Sbjct 197905 GTGAATAGGTTTCTGAGTGAATGTTCTCCATAGCTATTTAAAATCCATAGAAGCATCTTG 197964 Query 19310 CTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369 |||| | | || ||||| |||| || || | |||| |||||||| || || |||| Sbjct 197965 CTTCAGGAACTTGCACTTCTGTACAGAACTATTGGGCCAAGTTTTCATTCACAATACCAT 198024 Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG 19429 |||| |||||||| || || | ||||| ||||||||| || |||||||| | || | | Sbjct 198025 CACTTGCTGCAAAGAAGGCAAGTACATATTTAATAAAGTGCTTTTCATCGGCAGTGAGTT 198084 Query 19430 TATTCCAATCATTAATATC------TTT---------------------AGATAAATCTA 19462 | | |||||| |||| ||| ||| | ||||||||| Sbjct 198085 TTTCCCAATCTTTAAGATCCTAAAATTTATTAATTAAATAGAATACCTAATATAAATCTA 198144 Query 19463 CTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGAT 19522 ||||||| ||||||| ||| || | || |||||||| ||||| || ||| | Sbjct 198145 TTTCTTCAGCTGTCCAGAAACTTGCTTTGTGTTACTTATACATATTCCAGATGTCATTGT 198204 Query 19523 ATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 ||| ||| || || | |||||||||||| |||| ||| | || ||| || Sbjct 198205 ATTTTATGGGGAAGAGTACAAATCTATTTGGGTTTTGTTTTAAAAGAGGCTC 198256 >seq446 Length=770190 Score = 338 bits (374), Expect = 7e-88 Identities = 1104/1705 (65%), Gaps = 35/1705 (2%) Strand=Plus/Plus Query 47051 CCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATT 47110 |||| |||| ||||||||| |||| |||||| | | ||||| | || || ||||| Sbjct 617753 CCATGCATAAAAATGCATAGATGTTACTTTAGACATAGTTGGTTCAGCCATGTGGATATT 617812 Query 47111 AAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCT 47170 | || ||||||| ||||||||||| |||| || ||||| || || ||| | | Sbjct 617813 TAAGGACTGACTCTAATCAATAAATGGGGCTCTGGAAGTTGCCAAATTCAATATAGCTTT 617872 Query 47171 TTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG-TAT 47229 || | |||||||| ||||| ||||| | || ||| || | ||| | | | ||| Sbjct 617873 TTAGGAGATCTCCCAAACTGTCTTATATAATTATTTGATATTAGTTGGAATCTCATCTAT 617932 Query 47230 TTTGAATAGA-TCCTCCgttttctataatt---ttgttttttaattcatttgaccaaagt 47285 || |||| | || || | || ||| || || || | || || ||| | Sbjct 617933 ATTC--TAGACTGAACCATTATTCATGATTAATTTATTCTTGATTTGGGGTGTCCATAAG 617990 Query 47286 tttcgttcagttaatgtttttaaAAGATGAGGATTAA--CAATTTGAAATTCTCCAGATA 47343 ||| |||| | || | | | ||||||||| | ||| |||||||| | || Sbjct 617991 TTTAATTCAATCAAATCATCAACTAAATGAGGATTGATGCAAACG--AATTCTCCTGCTA 618048 Query 47344 GTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAA 47403 ||||| || |||| ||||| ||||||| ||||| | |||||||||||| | || Sbjct 618049 AAACTCTTCGTGTATAGATATTTGTTGTATAAGGTTCAAATGATTCATTATTTTATAGAA 618108 Query 47404 TTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATT 47463 ||| | ||||||||||| ||||| | ||||| |||||| ||||| | |||||| | Sbjct 618109 TTTAACTTGTTGATGCTGTTGGCATAGGTGCAATTAATAAAGAGTTTCTCATTCCATACT 618168 Query 47464 TTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAA 47523 | || | |||||||| | | || | |||| ||| ||| | Sbjct 618169 TAACAATATTCTATTTGAGAGTATTCCAATCATATA-ATTT--TGGACTCACACCCCACA 618225 Query 47524 AATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCG 47582 |||| |||| |||||||||| | | | ||| || | | || | |||||| || Sbjct 618226 TATCAAATTGCAGAATTCCTT-AGGAAGCAGGACTGCCTGCAAAAGTCTCATAAGGTCCA 618284 Query 47583 TATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATT 47642 | || || | ||| || | ||| |||| | ||| || || |||||||| ||| Sbjct 618285 AGTTATTGTGCTAATTCTAAAGATCTTTCACATGCTCCATAGTAGATAGTTTCAAAGATT 618344 Query 47643 TTTATGTTTAGATTCCTTG-CTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGT 47701 || || | |||| | | ||| ||| ||||| || || | Sbjct 618345 TTGGCATTCA-ATTCTAAGGCATCTTCTGAATCAAATGGGATTTTCATTCTTTGCAAAGC 618403 Query 47702 ATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGC 47761 |||||| ||||||| || ||||| ||||| ||||||| ||||||| | || || Sbjct 618404 ATCTGCAAATCCTTAGACTCCAATTCCAATAGGTCTATTTCTTTTATTGCTGTATTCTGC 618463 Query 47762 TTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNN 47821 || | ||||| ||| | ||| || | |||| ||| Sbjct 618464 TTACTAAACAGGATAAAAGTTCAAATCAATGACGATATTCAGATTTGTTGTAATTATTTT 618523 Query 47822 NACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTA---TAACAAACCTATTAAG 47878 ||| ||| ||| |||| ||||| || | |||| | | | ||| | | | Sbjct 618524 TGTAATCTCTAATAACTTATCAAAATTGAATGTTTTATCTTCTTTGATTAACTTTTACAA 618583 Query 47879 TGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTC 47938 ||| || ||||| || ||||| || |||| || ||||||| ||| ||||| Sbjct 618584 ATTAATACTAGCAAGATTGCAAACAGCAACTTCATCAGGTGATGTATATTATATGATTTC 618643 Query 47939 AGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG--TTA 47996 || |||||||||| | ||| |||||||| | ||| | |||||| | ||| ||| Sbjct 618644 AGTGCATAGATTACTGCTTTTTATAGTACCTAGATTCTTTTGATTACTTT--TTGAATTA 618701 Query 47997 CATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGAT 48056 || || || || || | |||| | ||| ||||||| ||| |||| ||||| || | Sbjct 618702 CAAGCATCTTTATATAACATATATGGTAATCCAGTTGATATTTGAGCATCAATTATTTCT 618761 Query 48057 TTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTA 48116 | ||| | || ||||| || ||||| | |||| | | ||| || | ||| Sbjct 618762 TACCATAATTATCTTGCCTTCATTGTCACTCTACCCATATTTTTAGATTCATAATCAGTG 618821 Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAAC---CCAGGACATTCATTAGGA 48173 ||||| || | ||||| | ||||| ||| |||| | || ||||||||||| ||| Sbjct 618822 TATAATTTGTTGAATTCTTAACCATA-ACA--ATCTTAGAGACCTGGACATTCATTTGGA 618878 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 |||||||| | |||||| |||| ||| ||||| |||||||| ||| |||||||| Sbjct 618879 CACATCAAAGTCCAATCTGAGTCATCTTTCACTCTTTACATAAATAGATCAGGTATCCAT 618938 Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTT-TTAAGTTC 48292 | | ||| ||| ||||| || | |||| ||||||| | ||| ||| || | || | Sbjct 618939 AAACCTAAAAACAAATCTCTTGCTCTTTATTCTTCAATCCCATGGTTCTTTCTCAATTAT 618998 Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCG 48352 |||||| | || |||||| |||||||||||||||||| || || | ||| || Sbjct 618999 AAGAAACT-TATGATATCACTATGCCATGGTTCTAAATAAATAGCAAAGGATCCTTTTCT 619057 Query 48353 TTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGAC 48412 ||| |||||||| ||||| |||||| || || | || | || | ||||| || || Sbjct 619058 TTTGCCACCTCCTTAATCTACATATCTTGCTGTGTCATTGAACACCTTCAACATAGGCAC 619117 Query 48413 AATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA-C 48471 | ||||| || ||||||||||| ||||||||| | | ||| || ||| Sbjct 619118 CAATCCATTACTAATTCCATTGGTTCCTCTAATATAACTATCTTATGATCTGATCTTAGA 619177 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 || ||| ||||| || ||||| ||| ||||||||||| | || || || | Sbjct 619178 TACGCTTAAT-CCTATGCCTCCTGCTGACTTACTGATTAGAGCACATCTCTTGAGTGTCT 619236 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCG 48591 |||| || ||||| || |||||||| ||||| || | |||||| ||||||| | Sbjct 619237 CATATATACCTTCAATTGAATCATCTACCATATCCAACAAAAAACATGATGACATTTAAG 619296 Query 48592 GATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATA 48651 ||| | ||| || ||||||||||||||| | |||||| | || | |||| || | Sbjct 619297 GATAAGGAGTACCACTATTAAATAATGTTGGTGTGGCATGAGTGAAGTACTTCTAAGACA 619356 Query 48652 ACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACAC 48711 || | ||| || | || | || | | |||| | ||| ||||| || || | Sbjct 619357 TTAAATGATAGGTCTAAAAGGCTGATTGAAGATCCTCCTTATGAATACCAATGCTGACTC 619416 Query 48712 GCATTAACATATATTGAGGTCTTTC 48736 ||| |||| |||| ||| ||||| Sbjct 619417 TCATCAACAATTATTAAGGCCTTTC 619441 >seq697 Length=319182 Score = 324 bits (358), Expect = 2e-83 Identities = 655/972 (67%), Gaps = 39/972 (4%) Strand=Plus/Minus Query 18623 CATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTTTGATATTCGG 18682 |||||| || ||| || |||| || | |||| ||||| ||||||||| || Sbjct 147686 CATCCATAGTAAATACTTTATCTTATTTTTTACTCATGACTCCAGCTTTTTGATAGTCTC 147627 Query 18683 CAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCCATAAAATCA 18741 | |||||| |||| |||||||| ||||| || | || ||||| ||| ||||| | ||| Sbjct 147626 CCACTCTTCTTTCGAAGAAATTGGTTTTACCTTACAAAGATAT-CATATCCATCCACTCA 147568 Query 18742 AATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCT 18801 || ||||| || ||| || || || || ||| | |||| | |||||| ||| Sbjct 147567 AAAGGATTCTTCGAATTGTAAATCTTGGGAGCACCCAATGCAAATATCAATCTATCTGCT 147508 Query 18802 ACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAGT 18861 ||||||| ||||||| ||||||| || |||||||||| || | || ||| ||||| Sbjct 147507 ACAAATTCAATATATTATTTCATCAAATTGGAATTCATTCCAATAAGTTCAACTGGTAGA 147448 Query 18862 GCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACAACTCTA 18921 || || ||| ||||||| ||| || | || ||| |||||| || || ||| Sbjct 147447 GCTTCACTAATGAATTCTTTTTCAATTTCAACAGCCGATGATATTATTTCATGAATTCT- 147389 Query 18922 TCTTCATTAGG-AGGGTATAGA--AGATGTTTAAACATCAAACATGCAAAATCACAATGT 18978 || |||| | ||| | | ||| || ||| | ||| ||||| || ||| Sbjct 147388 --TTGATTACTCATTTTATTAACTAAATGCTTGTACAGGAGACAAGCAAAGTCTGTATGG 147331 Query 18979 AGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtt 19038 || || || || || || |||||||| || || || | |||||||||| | |||| Sbjct 147330 AGACCTTCATCCCTTGAAATTAATTCATTTGAGAAGGTGAGTCCAGGCATCAATGATCTT 147271 Query 19039 ttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCA 19098 ||||| | ||| ||||| | | |||||| ||||||||||| || ||||| || || ||| Sbjct 147270 TTTTTGATCCAAAATATGGCACAAAATGAACCAGAAAAGAAGATGCCTTCAACAGCAGCA 147211 Query 19099 AAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAA 19158 || |||| | ||| || || | | |||||| | || |||||||||| ||||| Sbjct 147210 AAGGCAATCAATCTCTCAGCAAAT---GAATCATTCTCATTTATCCATTTCATAGCCCAC 147154 Query 19159 TCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCA 19218 |||||||||| | | |||| | || || | || | ||||| | ||| Sbjct 147153 ATTGCCTTCTTTTGAATAACAGGCACATTGTCAATTGCATGTAGAAGATAGTTCTTTTCA 147094 Query 19219 TCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCT 19278 | | ||| | | || | |||||||| | | || |||||||||| |||||||| Sbjct 147093 TTTTCATCGGTTATGTAAGTGTCTATCAAAAGAGAATAAGTTTCTGAATGTATATTTTCC 147034 Query 19279 ATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAAT 19338 || || || | |||||| ||||| ||||| ||||| | | | ||||| |||| || Sbjct 147033 ATTGCTATTTAAAATCCATAAAAGCATCTGGCTTCAGGCACTTAAACTTCTGTACAGAAC 146974 Query 19339 CTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGT 19398 || | |||| |||||||| || || |||||||| ||||||||||| |||| |||| Sbjct 146973 TATTAGGCCAAGTTTTCATTCACAATACCATCACTGGCTGCAAAAAAGGCTAGGACATAC 146914 Query 19399 TTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATC------TTT- 19451 ||||||||||| |||||||| | || | | | |||||| |||| ||| ||| Sbjct 146913 TTAATAAAATGCTTTTCATCAGCTGTAAGCTTTTCCCAATCTTTAAGATCCTAAAATTTT 146854 Query 19452 ---------------------AGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC 19490 | ||||||||| ||||| ||||||| ||| || | Sbjct 146853 ATTACTCAAATAGAGTACCTAATATAAATCTATCTCTTCTGCTGTCCAGAAACTTGCTTT 146794 Query 19491 TGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATT 19550 || ||||||||||||||| || ||| |||| ||| || || | ||||||||||| Sbjct 146793 GTGTTATTTATACATGTTCCAAATGTCATTGTATTTTATGGGGAAGAGTACAAATCTATT 146734 Query 19551 TTTATTTTCTTT 19562 | |||| ||| Sbjct 146733 TGGGTTTTGTTT 146722 >seq69 Length=645506 Score = 284 bits (314), Expect = 1e-71 Identities = 1118/1745 (64%), Gaps = 44/1745 (3%) Strand=Plus/Plus Query 47018 TAAATAATACATACCAGTCTTTAAACC-TAAACTCCATCCATAGAAATGCATACTAGTTA 47076 || |||||| |||| || ||| | || | |||| |||||||||||||| ||| | Sbjct 507727 TATATAATATGTACCTGTTTTTCACCCCTTTTCTCCCAGCATAGAAATGCATAGAAGTCA 507786 Query 47077 ATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATG 47136 |||||| | ||||| | || || ||||| | || ||||||| ||||||||||| Sbjct 507787 CTTTAGACATTGTTGGTTCAGCCATGTGGATATTTAAGGACTGACTCTAATCAATAAATG 507846 Query 47137 CACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTAT 47196 | |||| || |||| || || || | ||| | |||||||| || || |||| Sbjct 507847 GAGCTCTGGAAGTGGCCAAATTTAGTATTGCTTTTTAGGAGATCTCCCAAACAGTCTTAT 507906 Query 47197 AAATTTGTTTAATGTCTTCTGGGAGAT--TAG-TATTTTGAATAGATCCTCCgttttcta 47253 | | ||| || | | || | | | | |||| | | ||| || ||| | Sbjct 507907 ACAAGGATTTGATATTATTAGGAATTTCTTCGATATTCTAGACAGAACCGTTGTTCATGA 507966 Query 47254 taattttgttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGAT 47313 | | ||| || || | || | || ||| | ||| |||| | || | | | || Sbjct 507967 TTAATTTATTCTTGATTTGAGGTGTCCATAAGTTTAATTCAATCAAATCATCAACTAAAT 508026 Query 47314 GAGGATTAA--CAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGT 47371 ||||||||| ||| |||||||||| | ||||| | | || || ||| | || Sbjct 508027 GAGGATTAATGCAAACG--AATTCTCCAGCCAACACTCTTCTTGTGTAGATGTTAGTAGT 508084 Query 47372 ATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGA 47431 ||||||||| | |||||||||||| | ||||| | ||||||||||| ||||| | Sbjct 508085 ATATGGTTCAAATGATTCATTATTTTACAGAATTTAACTTGTTGATGCTGTTGGCATAGG 508144 Query 47432 TGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCA 47491 ||||| ||||| ||| || | ||| | || || | ||||| Sbjct 508145 TGCAATCAATAAAGAATTCCTCATTCCGTGCTTGGCAATATTCTATTTGAGAGTATTCCA 508204 Query 47492 ATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTAT 47551 ||| | | || | |||| ||| ||| | |||| |||| | ||||||| | | Sbjct 508205 ATCATATA-ATTT--TGGACTTACACCCCACATATCAAATTGCAATATTCCTT-ATGAAG 508260 Query 47552 C-GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTT---AGCGAGTTCACAACTTG 47607 | ||| || || | |||| |||||| || || || ||| | ||| || || Sbjct 508261 CTGGACTGCCGGTAAAGGTTTCATAAGGTCCA---AGCTTCTAAGCCAATTCCAAAGATG 508317 Query 47608 CTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG-CTTCT 47666 || |||| | ||| || || |||||||| || ||| || | |||| | | ||| Sbjct 508318 TTTAGCATGCTCCATAGTAGATAGTTTCAAAGATCTTTGCATTCA-ATTCTAAGGCATCT 508376 Query 47667 GATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATA 47726 ||| ||||| || |||| |||||| ||||||| || ||||| Sbjct 508377 TCTGAATCAAATGGGATTTTCATTCTTTGTAATGCATCTGCAAATCCTTAGACTCCAATT 508436 Query 47727 CCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATA 47786 ||||| ||||||| ||||||| | || |||| | | ||||| ||| | | Sbjct 508437 CCAATAGGTCTATTTCTTTTATTGCTGTATTCTGCTTATTTAACAGGATAAAAGTTCAAA 508496 Query 47787 TCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAA 47846 || || | |||| ||| ||| ||| || |||| |||| Sbjct 508497 TCAATGACAATATTCAGATTTATTGTGATTATTTTTGTAATCTCTAATAGCTTATCAAAA 508556 Query 47847 TCAAACTTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACA 47903 || || | |||| | | | ||| | | | ||| || ||||| || ||| Sbjct 508557 TCGAAGGTTTTATCTTCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTGCAAACA 508616 Query 47904 GCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATA 47963 || | |||| || ||||||| ||| ||||||| |||||||||| || ||||||| Sbjct 508617 GCAATTTCATCAGGTGATGTATATTATATGATTTCAGTGCATAGATTACTACTTTTGATA 508676 Query 47964 GTACCCAAATTTTGATGATTATTNNNNTTG--TTACATGCGTCCTTGTAAAGCATAAAAG 48021 ||||| | ||| | | |||| | ||| ||||| || || || || | |||| | | Sbjct 508677 GTACCAAGATTCTTTTAATTACTTT--TTGAATTACAAGCATCTTTATATAACATATATG 508734 Query 48022 GTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA-AACAGTCCTAGCCTTTATA 48080 || ||||||| ||| |||| |||||||| || ||| || ||| | ||||| || Sbjct 508735 GTAATCCAGTTGATATTTGAGCATCAATGATTTCTTACCACAATTGTC-TGGCCTTCATT 508793 Query 48081 ACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCA 48140 |||| | | || | | || || | ||| || || || | ||||| | ||| Sbjct 508794 GTTACTCTTCCCATGTTTTTAGACTCATAATCAGTGTACAATTTGTTGAATTCTTAACCA 508853 Query 48141 TACACATTATCTAAC---CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCA 48197 || ||| |||| | || ||||| ||||| ||||||||||| | ||||||| ||| Sbjct 508854 TA-ACA--ATCTTAGAGACCTGGACACTCATTTGGACACATCAAAGTCCAATCCGAGTCA 508910 Query 48198 TTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTT 48257 | || ||||| |||||||| ||| || ||||| | | ||| ||| ||||| || | | Sbjct 508911 TCCTTCACTCTTTACATAAATAGATCAGGGATCCATAAACCTAAAAACAAATCTCTTGCT 508970 Query 48258 CTTAGTTCTTCATTGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATG 48316 ||| ||||||| | ||| ||| || | || | |||||| | || |||||| ||| Sbjct 508971 CTTTATTCTTCAATCCCATGGTTCTTTCTCAATTATAAGAAACT-GATAATATCACTATG 509029 Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376 ||||||||||||||| || || | ||| || ||| |||||||| ||||| ||| Sbjct 509030 CCATGGTTCTAAATAAATAGCGAAGGATCCTTTTCTTTTGCCACCTCCTTAATCTACATA 509089 Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436 ||| || |||| || | || | ||||| || || | ||||| || ||||| || Sbjct 509090 TCTTGCTGTATCATTGAACACCTTCAACATAGGAACCAATCCATTGCTGATTCCATTAGT 509149 Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATT---ACTAATTGAAATACCTATACCACC 48493 ||| |||||||| | | ||| || || | | || ||| || || || || Sbjct 509150 TCCTCTGATATAACTATCTTATGATCTGATCTTTGAAGCACTT--AAT-CCAATTCCTCC 509206 Query 48494 TGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATC 48553 || ||| ||||||||||| | || || || ||||| || ||||| || ||| Sbjct 509207 AGCAGACTTACTGATTAGAGCACATCTCTTGAGAGTCTCATATATACCTTCAATGGAATC 509266 Query 48554 ATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAA 48613 ||||| ||||| || || ||||| ||||||| |||| ||| || ||||| Sbjct 509267 ATCTACCATATCCAACAGGAAACATGATGACATTTAAGGATAGGGAGTGCCACTGTTAAA 509326 Query 48614 TAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAAC 48673 ||| ||||| | |||||| | || | |||| || | || | ||| |||| || | Sbjct 509327 TAAGGTTGGTGTGGCATGAGTGAAGTACTTCTAGGACATTAAATGATAAGTTTAAAAGGC 509386 Query 48674 AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCT 48733 ||| | | |||| || || ||||| || || | |||||| | |||| ||||| Sbjct 509387 AGATTAGAGATCCTCTTTGTGAATACCAATGCTGACTCTCATTAATAACTATTATGGTCT 509446 Query 48734 TTCAA 48738 ||||| Sbjct 509447 TTCAA 509451 >seq7 Length=306506 Score = 104 bits (114), Expect = 3e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| |||| || ||||||||| |||||| || || ||||||||||| | Sbjct 180137 ATTGTGGAATTTAGTGAGAAGATGGCAAATTTAGGAAAGATTGTAATAGTTGCAGCTCTT 180196 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 |||||||| ||| | || |||||||| ||| | |||| || ||||| || |||| Sbjct 180197 GATGGAACTTTTGACAGGAAACCTTTCCATAACATCCTAAACTTGATTCCTTTGGCTGAG 180256 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 |||| ||||| |||||||||||| Sbjct 180257 CGCATAACTAAACTAACAGCTGTGTGT 180283 >seq56 Length=236632 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| |||| || ||||||||| ||| || || || || || || || ||| Sbjct 140868 ATTGTGGAATTTAGTGAGAAGATGGCAAATTTAGGGAAGATTGTAATTGTGGCTGCTTTG 140927 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 |||||||| ||| | || || |||||| ||| | ||||| ||||||| || |||| Sbjct 140928 GATGGAACCTTTGACAGGAAGCCTTTTCATAACATCTTAAACCTAATTCCTTTGGCTGAG 140987 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 |||| ||||| ||||| || ||| Sbjct 140988 CGCATAACCAAACTCACAGCAGTCTGT 141014 >seq83 Length=146481 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| ||||| ||||| ||| ||||||||||| ||||||||||| | Sbjct 83561 ATTGTTGAATTTAGTGAAGCCATGGCTAATTTGGGAAAAATAGTAATAGTTGCAGCTCTT 83502 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 ||||| ||||| | |||||||||||| |||| | | | ||| ||||| || |||| Sbjct 83501 GATGGCACATTCGATAGAAAACCTTTTCGTAACATTCTGAGTTTGATTCCCTTGGCTGAG 83442 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 | || ||| | ||||| || ||| Sbjct 83441 CGCATCACCAAATTAACAGCAGTCTGT 83415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562103902627080