Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq99 114 1e-20 seq71 102 7e-17 seq247 100 2e-16 seq386 98.7 8e-16 seq502 95.1 1e-14 seq36 95.1 1e-14 seq114 91.5 1e-13 >seq99 Length=47800 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||||||||||||||||||||| || |||||||| || || ||||| || Sbjct 7175 AATGCAAATATTTGTAAAAACATTAACTGGAAAAACCATCACTCTTGATGTTGAACCATC 7234 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| || || || ||| | || ||| | Sbjct 7235 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGATAAGGAAGGAATCCCACCTGATTA 7294 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 7295 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 7354 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 7355 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 7405 >seq71 Length=215326 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 || |||| |||| || ||||| ||| | || || ||||| || || || ||||| Sbjct 119901 AACAATGTAAATTTTCGTAAAGACACTCACAGGAAAAACAATCACTCTTGATGTTGAACC 119842 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || || | | | | ||||| |||||| ||||| || ||| | || || Sbjct 119841 ATCTGACACAATTGATGCTGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCACCCGA 119782 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 | |||| ||||||||||| || || ||| |||| ||||| | ||| | | || || Sbjct 119781 TTAACAAAGACTTATCTTCGCTGGTAAATAATTAGAAGACGGAAGAACACTTTCAGACTA 119722 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||| |||| ||||| ||||| ||| | || |||||||| ||||||| || Sbjct 119721 TAACATTTAAAAGGAATCCACTCTTCACTTAGTCTTAAGATTGAGAGGAGGAAT 119668 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || ||| | || || || || || || || ||||| || Sbjct 119440 AATGTAAATCTTCGTCAAGACACTCACAGGAAAGACTATCACTCTTGATGTTGAACCATC 119381 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | ||||| |||||| ||||| || ||| | ||| ||| | Sbjct 119380 TGACACAATTGATGCTGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCTGATTA 119321 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | |||||||||||||| || || |||| |||||| | ||| | | || ||||| Sbjct 119320 ATAAAGACTTATCTTTGCTGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAA 119261 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| |||| ||||| || || ||| |||| || ||||| ||||||| || Sbjct 119260 CATTTAAAAGGAATCAACCCTTCACTTGGTCTTGAGATTGAGAGGAGGAAT 119210 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || ||| | || || ||||| || || || ||||| || Sbjct 119212 AATGTAAATCTTCGTCAAGACACTTACAGGAAAAACAATCACTCTTGATGTTGAACCATC 119153 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | | ||| |||||| || || || ||| | || ||| | Sbjct 119152 TGACACTATTGATGCTGTTAAGGCTAAAATCTAAGATAAGGAAGGAATCCCACCCGATTA 119093 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||||||||| || || ||| |||| ||||| | ||| | | || ||||| Sbjct 119092 ATAAAGACTTATCTTCGCTGGTAAATAATTAGAAGACGGAAGAACACTTTCAGACTATAA 119033 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| |||| ||||| || || ||| |||| |||||||| ||||||| || Sbjct 119032 CATTTAAAAGGAATCAACCCTTCACTTGGTCTTAAGATTGAGAGGAGGAAT 118982 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || ||| | || || || ||||| || || ||||| || Sbjct 119670 AATGTAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACTCTTGATGTTGAACCATC 119611 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | | ||| || ||| ||||| || ||| | ||| ||| | Sbjct 119610 TGACACCATTGATGCTGTTAAGGCTAAGATCCAAGACAAGGAAGGAATCCCCCCCGATTA 119551 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||||||||| || || ||| |||| ||||| | ||| | | |||||||| Sbjct 119550 ATAAAGACTTATCTTCGCTGGTAAATAATTAGAAGACGGAAGAACACTCTCAGATTATAA 119491 Query 28733 CATTC--AAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || || | ||||| || || ||| |||| ||||||||| ||||||| || Sbjct 119490 CAATCTAAAGAGGAATCAACCCTTCACTTGGTTTTAAGATTAAGAGGAGGAAT 119438 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || ||| | || || ||||| || || || ||||| || Sbjct 118984 AATGTAAATCTTCGTCAAGACACTTACAGGAAAAACAATCACTCTTGATGTTGAACCATC 118925 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | | ||| |||||| || || || ||| | || ||| | Sbjct 118924 TGACACTATTGATGCTGTTAAGGCTAAAATCTAAGATAAGGAAGGAATCCCACCCGATTA 118865 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||||||||||| || || || |||| ||||| | ||| | | || ||||| Sbjct 118864 ACAAAGACTTATCTTCGCTGGAAAGTAATTAGAAGACGGAAGAACACTTTCAGACTATAA 118805 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||| |||| ||||| || || ||| |||| |||||||| ||||||| Sbjct 118804 CATTTAAAAGGAATCCACACTTCACTTGGTTTTAAGATTGAGAGGAGG 118757 >seq247 Length=527326 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||| |||| ||||| || || | |||||||| ||||| || ||| || || Sbjct 405840 AATATGTAAATTTTTGTTAAGACCCTCACGGGTAAGACCATCACACTCGATGTTGAGCCA 405899 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | | | ||| ||| ||| ||||| || ||| | || ||| Sbjct 405900 TCTGACACTATCGATGCTGTTAAGGCAAAGATCTAGGACAAGGAAGGAATCCCTCCCGAT 405959 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||| | ||| | || || || || || |||||||||||| | |||| | | |||||| Sbjct 405960 CAATAAAGATTAATTTTCGCTGGAAAGCAATTGGAAGATGGAAGAACTCTTTCAGATTAT 406019 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||| ||||| || ||||||| ||| | ||||||| Sbjct 406020 AACATCCAAAAGGAATCAACTCTCCATTTGGTATTGAGACTCAGAGGAGG 406069 >seq386 Length=4266 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 634 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 693 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 694 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 753 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 754 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 813 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAATAAT 28789 ||| |||| ||||| ||||| ||| | || || |||||| |||| || ||||| || Sbjct 814 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTAAGAGGTGGCATAATGAT 870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || ||||| || || || || |||||||| || || ||||| || Sbjct 2126 AATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 2185 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCC-CGTAGATC 28671 ||| || | | || | ||||| ||||| ||||| || ||| | || | | ||| Sbjct 2186 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGGATT 2245 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 || | ||||| || ||||| || || |||| |||||| | ||| | | ||||||| Sbjct 2246 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATA 2305 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 2306 ACATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 2357 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || ||||| || || || || |||||||| || || ||||| || Sbjct 174 AATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 233 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 234 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 293 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 294 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 353 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 354 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 404 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 ||| | || |||| || || || || || || || |||||||| || || |||| Sbjct 3040 TAAGATTGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAAC 3099 Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 | ||||| || | | || | ||||| ||||| ||||| || ||| | || | Sbjct 3100 CATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTG 3159 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 || || | ||||| || ||||| || || |||| |||||| | ||| | | |||| Sbjct 3160 ATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATT 3219 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||| |||| ||||| ||||| ||| | || || |||||| |||| || Sbjct 3220 ATAACATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 3271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 1667 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 1726 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 1727 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 1786 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 1787 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 1846 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 1847 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 1897 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 2355 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 2414 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 2415 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 2474 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 2475 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 2534 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 2535 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 2585 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 2583 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 2642 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 2643 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 2702 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 2703 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 2762 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 2763 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 2813 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 2811 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 2870 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 2871 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 2930 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 2931 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 2990 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||| |||| ||||| ||||| ||| | || || ||||| |||| || Sbjct 2991 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGG 3038 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 28552 AAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTT 28611 ||||| |||| || ||||| || || || || |||||||| || || ||||| | Sbjct 1436 AAATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCAT 1495 Query 28612 CAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 |||| || | | || | ||||| ||||| ||||| || ||| | || ||| Sbjct 1496 CAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 1555 Query 28672 AACAGA-GACTTATCTTT-GCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 || | | |||| || ||| || || || |||| |||||| | ||| | | ||||| Sbjct 1556 AATAAAAGACTCATTTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTA 1615 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 1616 TAACATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 1669 >seq502 Length=458689 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 || ||||| |||| || ||||| || || || || |||||||| || || |||| Sbjct 101081 TAGAAATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAAC 101140 Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 | ||||| || | | || | ||||| ||||| ||||| || ||| | || | Sbjct 101141 CATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTG 101200 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 || || | ||||| || ||||| || || |||| |||||| | ||| | | |||| Sbjct 101201 ATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATT 101260 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 101261 ATAACATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 101315 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || ||||| || || || || |||||||| || || ||||| || Sbjct 102687 AATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 102746 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 102747 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 102806 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 102807 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 102866 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 102867 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 102917 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || ||||| || || || || |||||||| || || ||||| || Sbjct 101772 AATGTAAATTTTCGTAAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 101831 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 101832 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 101891 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 101892 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 101951 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATT-ACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| | |||| || || Sbjct 101952 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAAGAGGTGGAAT 102003 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 103371 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 103430 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 103431 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 103490 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 103491 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 103550 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||| |||| ||||| ||||| ||| | || || |||||| |||| || Sbjct 103551 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 103598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 102231 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 102290 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 102291 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 102350 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 102351 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 102410 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 102411 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 102461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 102459 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 102518 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 102519 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 102578 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 102579 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 102638 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 102639 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 102689 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 102915 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 102974 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 102975 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 103034 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 103035 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 103094 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 103095 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 103145 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || | || || || |||||||| || || ||||| || Sbjct 103143 AATGTAAATTTTCGTTAAGTCTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 103202 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| | Sbjct 103203 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 103262 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 | | ||||| || ||||| || || |||| |||||| | ||| | | |||||||| Sbjct 103263 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 103322 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 103323 CATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 103373 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/232 (68%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||| |||| || || || || || || || |||||||| || || ||||| || Sbjct 101313 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAACCATC 101372 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAG-GGAGTGCCCGTAGATC 28671 ||| || | | || | ||||| ||||| ||||| || ||| | || ||| Sbjct 101373 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAAGGAATCCCACCTGATT 101432 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 || | ||||| || ||||| || || |||| |||||| | ||| | | ||||||| Sbjct 101433 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATA 101492 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| |||| ||||| ||||| ||| | || || ||||| |||| || || Sbjct 101493 ACATCTAAAAGGAATCCACTCTCCACTTAGTTTTGAGATTGAGAGGTGGAAT 101544 >seq36 Length=667686 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||| |||| ||||| ||||| | ||||| || || || || || ||| |||||| Sbjct 163639 ATGTAAATTTTTGTTAAAACCCTTACGGGAAAGACTATCACACTTGATGTGGAGCCTTCA 163580 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| || || || ||||| ||| | || |||||| Sbjct 163579 GACACCATTGATGCTGTCAAGGCTAAGATTTAAGATAAAGAAGGAATTCCACCTGATCAA 163520 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 | ||| | || ||||| || || ||| | ||||| | |||| | | |||||||| Sbjct 163519 TAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGACGGAAGAACTCTTTCAGATTATAAT 163460 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||| |||||||||||||||| ||| | || || |||||| |||| || Sbjct 163459 ATTTAAAAAGAATCTACTCTCCACTTAGTTTTGAGATTAAGAGGTGG 163413 >seq114 Length=584889 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||| |||| ||||| || || | ||||| || ||||| || ||| || || Sbjct 475321 AATATGTAAATTTTTGTTAAGACCCTCACGGGCAAGACCATCACACTCGATGTCGAGCCA 475380 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | | | ||| ||| ||| |||||||| ||| | || ||| Sbjct 475381 TCTGATACTATCGATGCTGTTAAGGCAAAGATCTAAGACAAAGAAGGAATCCCTCCCGAT 475440 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || | ||| | || ||||| || || |||||||| ||| | |||| | |||||||| Sbjct 475441 TAATAAAGATTGATTTTTGCTGGAAAGCAATTGGAGGATGGAAGAACTCTTTCCGATTAT 475500 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| |||| ||||| ||||| || | ||||| ||| | ||||||| Sbjct 475501 AACATCTAAAAGGAATCAACTCTCCATTTAGTATTGAGACTCAGAGGAGG 475550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401186319163