Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq99 141 2e-28 seq680 129 1e-24 seq60 125 1e-23 seq36 125 1e-23 seq70 122 2e-22 seq502 118 2e-21 seq114 116 7e-21 seq247 113 8e-20 seq386 109 1e-18 >seq99 Length=47800 Score = 141 bits (156), Expect = 2e-28 Identities = 186/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 7412 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 7353 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 7352 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 7293 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| ||||||| ||||| | || | | |||||| || || Sbjct 7292 ATCAGGTGGGATTCCTTCCTTATCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 7233 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| || ||||| || |||| ||||||||||||||||||| || Sbjct 7232 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATATTTGCA--TT 7175 Query 193364 attagtaaaataattat 193380 | || |||| | ||||| Sbjct 7174 AATATTAAATTTATTAT 7158 >seq680 Length=357438 Score = 129 bits (142), Expect = 1e-24 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | ||| | ||| | || | ||||| |||||||||| || || Sbjct 173419 ACCACCTCTTAATCTCAATACTAAATGGAGAGTTGATTCTTTTTAAATATTATAATCTGA 173478 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| || || | ||| ||||| || ||||| ||||| | || ||||||||| Sbjct 173479 AAGTGTTCTTCCGTCTTCAAGTTGCTTTCCTGCGAAAATCAATCTTTATTAATCAGGAGG 173538 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||||||||||| || |||| || | ||| || || || | |||||| Sbjct 173539 AATTCCTTCTTTATCTTAAATCTTGGCCTTGACTGCATCAATTGTGTCTGATGGCTCAAC 173598 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttatt 193366 || ||||| || || || || || || ||||| ||||| |||| ||| ||||| Sbjct 173599 ATCAAGAGTGATGGTCTTTCCCGTAAGGGTTTTAACAAAAATTTACATATTATT 173652 >seq60 Length=234462 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 129089 AATTTACATTCCACCTCTCAATCTCAAGACTAAGTGAAGAGTTGATTCCTTTTAGATGTT 129148 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | | ||||| ||| |||||||| ||||| || ||||| | ||| | || Sbjct 129149 ATAATCTTAAAGTGTTCTTCCATCCTCTAATTGCTTTCCTGCGAAAATGAGTCTTTATTA 129208 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | ||| | | ||||||||| Sbjct 129209 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACAGCATCAATAGTATCTTC 129268 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 |||| || || ||||| |||||||| || ||||| ||||||||||| ||||| || Sbjct 129269 TGACTTTACATCGAGAGTAATAGTTTTTCCGGTTAGGGTTTTTACAAAAATTTGAAT 129325 >seq36 Length=667686 Score = 125 bits (138), Expect = 1e-23 Identities = 176/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | || | || | |||| ||||| |||||||||| || || Sbjct 163412 ACCACCTCTTAATCTCAAAACTAAGTGGAGAGTAGATTCTTTTTAAATATTATAATCTGA 163471 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| || || | ||| ||||| |||||||| ||||| | ||||||||| || Sbjct 163472 AAGAGTTCTTCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGTGG 163531 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||||||||||| || || | || | | ||| || || |||| ||| || Sbjct 163532 AATTCCTTCTTTATCTTAAATCTTAGCCTTGACAGCATCAATGGTGTCTGAAGGCTCCAC 163591 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || ||||| || || || || ||||| ||||| |||| ||| |||| || Sbjct 163592 ATCAAGTGTGATAGTCTTTCCCGTAAGGGTTTTAACAAAAATTTACATAATATTTTAAAT 163651 Query 193373 ataatta 193379 |||||| Sbjct 163652 TTAATTA 163658 >seq70 Length=215836 Score = 122 bits (134), Expect = 2e-22 Identities = 181/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 1109 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 1168 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 1169 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 1228 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 1229 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 1288 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| ||||| || || || | || || || || |||| |||||| Sbjct 1289 TGGTTCAACATCAAGAGTAATAGTCTTTCCAGTCAAAGTCTTAACGAAAATTTACATTTT 1348 Query 193364 attagtaaaataattat 193380 || ||| |||| || Sbjct 1349 CTTTTAAAATTAATAAT 1365 >seq502 Length=458689 Score = 118 bits (130), Expect = 2e-21 Identities = 183/259 (71%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 101322 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 101263 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 101262 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 101203 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 101202 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 101143 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattt- 193362 | ||||| || ||||| || ||||| || || | || ||||| || |||| ||||| Sbjct 101142 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTACGAAAATTTACATTTC 101083 Query 193363 tattagtaaaataattatt 193381 |||| || ||||||||| Sbjct 101082 TATT-TTATTATAATTATT 101065 Score = 109 bits (120), Expect = 1e-18 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 102924 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 102865 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 102864 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 102805 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 102804 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 102745 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || ||||| || |||| |||| Sbjct 102744 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTACGAAAATTTACATT 102687 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 102468 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 102409 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 102408 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 102349 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 102348 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 102289 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 102288 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 102231 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 102696 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 102637 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 102636 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 102577 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 102576 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 102517 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 102516 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 102459 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 103152 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 103093 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 103092 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 103033 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 103032 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 102973 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 102972 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 102915 Score = 100 bits (110), Expect = 5e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 103380 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 103321 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 103320 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 103261 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 103260 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 103201 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | | || || || |||| |||| Sbjct 103200 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGACTTAACGAAAATTTACATT 103143 Score = 98.7 bits (108), Expect = 2e-15 Identities = 166/239 (69%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 101551 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 101492 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 101491 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 101432 Query 193244 ATCAGGAGGTATTCC-TTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 |||||| || ||||| ||| || |||| ||||| | || | | |||||| || | Sbjct 101431 ATCAGGTGGGATTCCTTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTG 101372 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 101371 ATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 101313 Score = 96.9 bits (106), Expect = 6e-15 Identities = 167/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTAC-CAGATGCAATGTAGCCTCTTTAGAAATAT 193182 |||||| || ||||||||||||| | || || || | || | || || | || | Sbjct 101781 AATTTACATTCCACCTCTCAATCTCAAAACTAAGGTGGAGAGTGGATTCCTTTTAGATGT 101722 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 |||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 101721 TATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATT 101662 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 |||||| || |||||||| || |||| ||||| | || | | |||||| || | Sbjct 101661 AATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTG 101602 Query 193303 AAG-ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 101601 ATGTGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 101542 Score = 93.3 bits (102), Expect = 8e-14 Identities = 166/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 102240 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 102181 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGC-AAAAATTAATCTCTGTT 193242 ||| || || | ||||| ||| ||||||| ||||| || |||||| | ||| | || Sbjct 102180 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAAATGAGTCTTTATT 102121 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 |||||| || |||||||| || |||| ||||| | || | | |||||| || | Sbjct 102120 AATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTG 102061 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttac-aaatatttgcatt 193361 | | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 102060 ATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGGAAAATTTACATT 102001 >seq114 Length=584889 Score = 116 bits (128), Expect = 7e-21 Identities = 198/283 (70%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| | || | ||| | ||| | || | || || | || ||||| ||||| Sbjct 475551 ACCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCCTTTTAGATGTTATAATCGGA 475492 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || ||||| ||||| |||||||| ||||| | || ||| ||||| Sbjct 475491 AAGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATCAATCTTTATTAATCGGGAGG 475432 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 ||||||||||| |||| || || | || | | |||||||| || | ||| || Sbjct 475431 GATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCGAC 475372 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || || || || || || || || || ||||| |||| ||| ||||| |||| Sbjct 475371 ATCGAGTGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAAATTTACATATTATT-TTAAA 475313 Query 193373 ----ataattattttaaataatatatactttatatt-ttaaCA 193410 ||| || || |||| | |||||||||||| |||||| Sbjct 475312 TTTTTTAAAAATCTTTAATA--AAATACTTTATATTCTTAACA 475272 >seq247 Length=527326 Score = 113 bits (124), Expect = 8e-20 Identities = 198/284 (70%), Gaps = 7/284 (2%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| | || | ||||| ||| | || | || || || ||||| || || Sbjct 406070 ACCTCCTCTGAGTCTCAATACCAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCTGA 406011 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || ||||| ||||| || ||||||||||| | |||||| ||||| Sbjct 406010 AAGAGTTCTTCCATCTTCCAATTGCTTTCCAGCGAAAATTAATCTTTATTGATCGGGAGG 405951 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||| || || | || || | || | | ||||| || || | |||||| Sbjct 405950 GATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTGTCAGATGGCTCAAC 405891 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || || || ||||| || || || || ||||| |||| ||| ||||| |||| Sbjct 405890 ATCGAGTGTGATGGTCTTACCCGTGAGGGTCTTAACAAAAATTTACATATTATT-TTAAA 405832 Query 193373 at----aattattttaaataatatatactttatattttaaCATT 193412 | || || || ||||| || || |||||||| ||||||| Sbjct 405831 TTTTTAAAAAATCTTTAATAA-AT-TATTTTATATTCTAACATT 405790 >seq386 Length=4266 Score = 109 bits (120), Expect = 1e-18 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 411 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 352 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 351 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 292 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 291 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 232 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || ||||| || |||| |||| Sbjct 231 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTACGAAAATTTACATT 174 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 1904 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 1845 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 1844 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 1785 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 1784 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 1725 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 1724 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 1667 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 2592 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 2533 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 2532 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 2473 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 2472 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 2413 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 2412 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 2355 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 2820 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 2761 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 2760 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 2701 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 2700 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 2641 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||| || ||||| || ||||| || || | || || || || |||| |||| Sbjct 2640 TGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 2583 Score = 104 bits (114), Expect = 4e-17 Identities = 167/239 (70%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 2364 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 2305 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 2304 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 2245 Query 193244 AT-CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 || |||| || |||||||| || |||| ||||| | || | | |||||| || | Sbjct 2244 ATCCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTG 2185 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | | ||||| || ||||| || ||||| || || | || ||||| || |||| |||| Sbjct 2184 ATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTACGAAAATTTACATT 2126 Score = 100 bits (110), Expect = 5e-16 Identities = 170/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 1676 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 1617 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGC-AAAAATTAATC-TCTGT 193241 ||| || || | ||||| ||| ||||||| ||||| || |||||| | || | | | Sbjct 1616 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAAATGAGTCTTTTAT 1557 Query 193242 TGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCG 193301 | |||||| || |||||||| || |||| ||||| | || | | |||||| || Sbjct 1556 TAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCT 1497 Query 193302 GAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || | ||||| || ||||| || ||||| || || | || ||||| || |||| |||| Sbjct 1496 GATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTTACGAAAATTTACATT 1437 Query 193362 ttat 193365 | || Sbjct 1436 TCAT 1433 Score = 96.9 bits (106), Expect = 6e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 ||||||||||||| | || | || | || | || || | || ||||| || || Sbjct 3038 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTTATAATCTGAA 2979 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||||| ||| ||||||| ||||| |||||||| | ||| | || |||||| || Sbjct 2978 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 2919 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 |||||||| || |||| ||||| | || | | |||||| || || | ||||| Sbjct 2918 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 2859 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || ||||| || ||||| || || | || || || || |||| |||| Sbjct 2858 TCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACATT 2811 Score = 95.1 bits (104), Expect = 2e-14 Identities = 167/241 (69%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 2135 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 2076 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 2075 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 2016 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTT-TGGTTTTTATATTTAAAATAGTATCG- 193301 |||||| || |||||||| || |||| |||| | | || | | |||||| ||| Sbjct 2015 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTGTAGCCTTGACAGCGTCAATAGTGTCGA 1956 Query 193302 -GAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || | ||||| || ||||| || ||||| || || | || || || || |||| ||| Sbjct 1955 TGATGGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAAATTTACAT 1896 Query 193361 t 193361 | Sbjct 1895 T 1895 Score = 93.3 bits (102), Expect = 8e-14 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || | || || Sbjct 643 AATTTACATTCCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTT 584 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 583 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 524 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 523 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 464 Query 193304 AGACTCAACTTCTAGAGTT--ATAGTTTTACC-TGT-TAGCGtttttacaaatatttgca 193359 | ||||| || |||| | || ||||| || ||| || || || || || |||| || Sbjct 463 TGGTTCAACATCAAGAGCTGCATGGTTTTTCCATGTCAAGAGTCTTAACGAAAATTTACA 404 Query 193360 tt 193361 || Sbjct 403 TT 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899646561761040