Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq202 98.7 1e-15 seq424 95.1 2e-14 seq44 84.2 3e-11 >seq202 Length=539671 Score = 98.7 bits (108), Expect = 1e-15 Identities = 118/156 (76%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 201570 ATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 201628 || ||| |||| ||||| || ||||| || |||| | |||| ||||||||||| || Sbjct 532071 ATCCCACAAATCGGAGACAAGTTTTGCAGCAGACATGGAC-AAAAGGGAACTTGTGGAAT 532129 Query 201629 GATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGATATTATA 201686 || |||| |||||||||| | || |||||| | | || || | || ||| | | Sbjct 532130 GACTTATCGACAAGAAGATTTACC--TTACACTCTTGTAGGCATTTCTCCAGATTTAACT 532187 Query 201687 ATCAATCCAAATTGTATACCATCAAGAATGACCATA 201722 ||||||||| ||||||| |||||||||||||||||| Sbjct 532188 ATCAATCCACATTGTATTCCATCAAGAATGACCATA 532223 >seq424 Length=468060 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 201570 ATACCAGAAATTGGAGATAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGGTAT 201628 || ||| ||||||||||||| ||||| | || |||| |||||||||| ||||| || Sbjct 8047 ATCCCATAAATTGGAGATAAGTTTTGCAGTAGGCATGG-ATAAAAAGGAACGTGTGGAAT 8105 Query 201629 GATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTATAAT 201688 || ||| | |||||||| | || || |||| |||||| | |||||| | | || Sbjct 8106 GACCTATAGATAAGAAGATTTACCATTCACACTTGTGGGTATATCTCCGGATTTAACCAT 8165 Query 201689 CAATCCAAATTGTATACCATCAAGAATGACCATA 201722 |||||| ||||||| || || |||||||| ||| Sbjct 8166 TAATCCACATTGTATTCCGTCTAGAATGACTATA 8199 >seq44 Length=260781 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 53058 TGAATTTAGCTATGGCTAAAGCTTACAATGCAGATTTTGATGGAGATGAAATGAATTTAC 53117 ||||||| || || || | |||||||||||||| |||||||||||||||||| | | Sbjct 206292 TGAATTTGTCTGTGTGTACTCCATACAATGCAGATTTCGATGGAGATGAAATGAATATGC 206351 Query 53118 ATATTCCTCAGTCTTATGAAGCTACTGCAGAATT 53151 || ||||||| || |||||| | | |||||||| Sbjct 206352 ATGTTCCTCAATCATATGAAACAATAGCAGAATT 206385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655274290873000