Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq99 93.3 3e-14 >seq99 Length=47800 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | || || || || |||||| || |||| ||||| ||||| || Sbjct 7402 CCACCTCTCAATCTCAAAACTAAGTGGAGAGTGGATTCCTTTTAGATGTTATAATCTGAA 7343 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | | || || |||| ||||| |||||||| | | | | ||| | || Sbjct 7342 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 7283 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || |||||| | | ||| ||| | ||||| || ||| || Sbjct 7282 ATTCCTTCCTTATCTTAAATTTT-AGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAAC 7224 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || ||||| ||||||||||| || ||||| Sbjct 7223 ATCAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATATTTGCAT 7176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701207762240