Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20tetraurelia_20[genbank_20GCA_5F000165425.1_202007-02- 02] 697 sequences; 72,094,543 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq247 84.2 2e-11 >seq247 Length=527326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||| |||||||| |||| || || || |||||||||||||| ||||| | Sbjct 406069 CCTCCTCTGAGTCTCAATACCAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCTGAA 406010 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | | || |||| ||||| || || || || || | | ||||| | || Sbjct 406009 AGAGTT--CTTCCATCTTCCAATTGCTTTCCAGCGAAAATTAATCTTTATTGATCGGGAG 405952 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | |||||||| ||| ||||| ||| | | | || ||||| | | || | Sbjct 405951 GGATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTGTCAGATGGCTCAA 405892 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || ||||| |||||||||||||| || || |||| ||| Sbjct 405891 CATCGAGTGTGATGGTCTTACCCGTGAGGGTCTTAACAAAAATTTACAT 405843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987341994049