Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15535 136 3e-27 >seq15535 Length=2413 Score = 136 bits (150), Expect = 3e-27 Identities = 388/588 (66%), Gaps = 20/588 (3%) Strand=Plus/Minus Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735 ||||||| | ||| || |||| || | ||||||||| || | | ||| || || | Sbjct 1565 TTTTAAGGG-ATCGATATGATTCTTGTAAACGTGAGCATCACCAAGAACATGAATGAATT 1507 Query 101736 CTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAA 101795 |||| | |||| | || | ||||| ||| |||||||| | || ||||||||||| Sbjct 1506 CTCCTCTCTTGAGATCACAAACTTAAGCAAGCATACAAGTTAATAAAGCATAGCTAGCAA 1447 Query 101796 TGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT 101855 |||| || || || |||| ||||||||| |||||||||||||| ||| || || | Sbjct 1446 TGTTGAAGGGAACACCTAGACCCATATCACATGATCTTTGATACATTTGGCAACTGAGTT 1387 Query 101856 TTCCATCACAG---ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAG 101912 | |||||| || |||||||| | | | ||| || || || | ||||||| Sbjct 1386 TCCCATCAGAGCTCACATAAAACTATGCAAGAATATGGCATGGTGGGAGAGCCATTTTGC 1327 Query 101913 GAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA 101972 || || | ||||||| |||| ||| | || | ||| |||||||||| | |||| Sbjct 1326 CAAGATCAGCTGCATTCCATGCACTCATAACAATACGTCTGCTTGTAGGGTTTTTCTTTA 1267 Query 101973 TAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC-GCGCCCAACA 102031 || || | | || || |||| |||| ||| ||||||| | | || | Sbjct 1266 ACTGATTGATAACGTCCGCTAGTTAATCAAAGCCTTGTCCACTATAATCAGTGTGCATC- 1208 Query 102032 CCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 | ||| | || |||||||| ||||| || |||||||| || || || || || | Sbjct 1207 GTATCATAAGCAGCACCGAAATGTCTCCATTGGAATCCATAGACTGGACCTAGGTCCCAC 1148 Query 102092 TCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAA 102151 || || | | | ||||| | | ||||| ||| |||| || |||| | |||||| Sbjct 1147 TCCTCACGATGAGTTAAACCGATCTAGTCTAAGAATTATCTTGAAGCATTTCCGTCCCAA 1088 Query 102152 ATGTGCACGCCAGCTGCTGATAGC------TCTTTGCTGTCAGTAGATCCTCTGATAAAC 102205 || | | || | || || |||| || | ||| || | | |||| Sbjct 1087 AT-----CTTGATCTTTTTATCGCTTAAATTCTTAGC-ATTTGTATCACCCTTAACAAAC 1034 Query 102206 CACAACAGTTCTTCAACAACACCTCTCCAAAATAC-TCTCTTAGTAGT 102252 || | ||||| ||| | ||||||||||| ||||| ||| |||||||| Sbjct 1033 CAAATAAGTTCCTCAGCTACACCTCTCCAGAATACATCT-TTAGTAGT 987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361139409800141