Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6480 280 2e-70 seq16451 257 2e-63 seq5752 138 1e-27 >seq6480 Length=2904 Score = 280 bits (310), Expect = 2e-70 Identities = 756/1137 (66%), Gaps = 26/1137 (2%) Strand=Plus/Minus Query 53498 TCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 53556 ||||| ||||| ||| || | |||| || || ||||| |||| || |||||||||||| Sbjct 1837 TCAAA-GGATATTTTGAGCATCATAAGGGCATCAGCTAAACCTTAAATACCAATACCGAT 1779 Query 53557 AGGTCTATGTCTCTTATTAGAGATTTCAGCTTC-TGGAATAGGATAATAATTAATATCTA 53615 |||||| |||||| | |||||| | ||||| | | | |||||| | || | |||| Sbjct 1778 AGGTCTGTGTCTCATGTTAGAGTTGCGGGCTTCATCGCA-AGGATAGAAGTTGTTGTCTA 1720 Query 53616 TAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 53675 | ||| |||| | || | |||| || | || | | || || | |||||| Sbjct 1719 TGATTCTATTTAAATTACGAGTAATTTGCATGGCTACTTAATGAAGCTTATCATAATCAA 1660 Query 53676 ATTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | ||||| | | || | || || ||||| | ||| || || ||||||| Sbjct 1659 AGGCTCCATTTGAAATGAAGCGAGGAAGTGAGATTGATGCTAAATTGCATACAGCTACCT 1600 Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 ||| | | ||||| || |||||| ||||| ||| | |||||||||||| | Sbjct 1599 CATCTGGGGAAGTATATTCAATGATCTCACAACAAAGGTTAGAGCTCTTGATGGTTCCAA 1540 Query 53796 AATTTTGTTGATTACTCTTTTTGTTA-CACGCATCCTTATAAAGAATGAATGGCGTACCA 53854 ||| | || |||||| || |||| || | ||| || ||||| ||| |||| || ||| Sbjct 1539 GATTCTTTTAATTACTTTTACTGTTGGCATG-ATCTTTGTAAAGCATGTATGGAGTTCCA 1481 Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914 |||||||| | | ||| ||||| |||| ||| | |||| |||| |||| ||| Sbjct 1480 GTTTCAATTTAGCTTTCAATAATAGCTTCCCAAAGTTTTTGAGC-TTTA--ATAGTTTTT 1424 Query 53915 -TATCTCTTTTCTCTT--TCGTAT--AGTGTATACAATCGTTCAAACTCGTCTCCCCAAA 53969 | | | ||||| |||||| |||||||| | | ||||| ||||| | Sbjct 1423 CTGCCGATACCCTCTTGTTCGTATCTAGTGTATAGCTTAA--CGAACTCTTCTCCGTGGA 1366 Query 53970 CATTGTCCAAT----CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 54025 | | | ||| || | | ||||| || || | || | ||| ||||| | ||| Sbjct 1365 CCT---CAAATAAACCCTTGGC-TTCATTGGGGCAGAATAAGGTCCAGTCTCCATTATCT 1310 Query 54026 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 54085 | |||| || ||||||||||||||||| ||| | ||| | || |||||||| | ||| Sbjct 1309 CTTACTCTTTCCATAAAGAGATCAGGAACCCACAAAGCAAAGAAAAGATCTCTTGCTCTT 1250 Query 54086 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 54145 |||||||| || || ||| || || | ||||| | | || |||| ||||| Sbjct 1249 TGTTCCTCTTTACCGTGATTTTTACGGAGCTATAGGAAATCAAAGATGTCAGCGTGCCAT 1190 Query 54146 GGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205 ||||| || || |||| | | ||| | || || || ||||||| || | Sbjct 1189 GGTTCTAAATAGATGGCGAAAGATCCTTTTCTCTTACCACCACCTTGATCTACATAACGG 1130 Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265 || || | ||| | ||||||| ||| || | || ||||| || ||| || || || Sbjct 1129 GCAGTTTCATTGAAGACTCTCAGCATGGGTACAAGGCCATTAGAATGACCGTTTGTTCCC 1070 Query 54266 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATT 54325 ||| ||| |||| | || | ||| ||| || | || || | || || || | Sbjct 1069 TTGATGTAGGATCCAGTAGCTCTAATGTTATGAACAGCAAGTCCAACTCCTCCAGCACTC 1010 Query 54326 TTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 |||||||| | ||| || | || || |||||||| || ||| || ||||||| | Sbjct 1009 TTAGAGATAAGAGCG-ATATTCTTCAAAGTATCATATATACCCATAATTGAATCATCCTT 951 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 ||| | || | |||||||| |||||| | | |||||| |||||||||| || Sbjct 950 CATCATGAGCAAGAAACAGCTGCTCATTTGAGGTTTAGGAGTTCCGGCATTAAATAGAGT 891 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTC 54504 ||||| |||||| || |||||| | ||| | || || || || || || || || || Sbjct 890 AGGAGTAGCGTGAGTGAACCATCTATCACTCATAAGGTTATATGTTTCAATTGCAGAATC 831 Query 54505 TATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 54564 ||||| || |||||| || |||| ||||||| | ||| | |||||||| ||| | Sbjct 830 AATATCTTCTTTATGAATACCGACTGAAACACGCAAGAGCATTTATTGAGGTCTCTCAGC 771 Query 54565 GATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 || ||| || || || || || || ||| |||| ||||||||||| ||||| || Sbjct 770 AATTTTGCCATTAATCTTAAGTAAATAAGATCTTTCTAAAGTTTTAAAGCCAAAGTA 714 >seq16451 Length=2876 Score = 257 bits (284), Expect = 2e-63 Identities = 768/1154 (67%), Gaps = 42/1154 (4%) Strand=Plus/Plus Query 53498 TCAAATGGATAATTTAAGAGAATAAAC-GCGTCTGCTAATCCTTGAACACCAATACCGAT 53556 ||||||||||| ||||||| |||| || ||||| || |||| |||||||||||| || Sbjct 1058 TCAAATGGATA-TTTAAGAAGTTAAAGAGCATCTGCAAAACCTTAAACACCAATACCAAT 1116 Query 53557 AGGTCTATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTA 53615 ||||||||| | ||| || || || ||||||| || || ||||||||| |||| | Sbjct 1117 GGGTCTATGTTTAAGATTTGA-ATATCTTGCTTCTGAAACTGGGTAATAATTATTATCAA 1175 Query 53616 TAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 53675 | || || || | || | |||| |||| ||||| | || || | | ||| Sbjct 1176 TTATCTTGTTTAAATTCTTAGTAATTCTTTTGGTAACATCATGCAACTTCTCATAGTCAT 1235 Query 53676 ATTGTCCA---TCTATT---ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGG 53729 ||| | | ||| || |||||| |||| || || || || || |||||||| || | Sbjct 1236 ATTCTTTAGTTTCTGTTTTTACAAACCTGTTTAAGGCTATTGAGGCTAGATTACATACAG 1295 Query 53730 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 53789 |||| |||| | | ||||| || || ||||| || ||||| || || ||| Sbjct 1296 CTACTTCATCTGGGCTAGTATATTCTACAATTTCAGTACAGAGATTTGAACTTTTTATGC 1355 Query 53790 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCG 53849 || | ||||||| |||| ||| ||||||| | ||| || || || || |||| | Sbjct 1356 ACCCCAGGTTTTGTTAATTAGATTTTCTGTTACAAGTATCTTTGTATAGCATATATGGAG 1415 Query 53850 TACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAG 53909 | ||||| ||||| || ||||||| |||| |||| | | ||||||||| | Sbjct 1416 TTCCAGTCTCAATTTGAGATTCTACAATCTAGCTCCATAACCATCTAGCCTTTATAGTC- 1474 Query 53910 ATTTGTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCA 53967 ||| | ||||| ||||| || ||| | ||| | | || || || |||||||| Sbjct 1475 -TTTCTGCCTCTTCCCTCTTCTTCATATTTTTCATAAAGTTTCTCGAATTCTTCTCCCCA 1533 Query 53968 AACAT-TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 54026 ||| | ||| || || || |||| |||||||| | | ||| ||| |||| || Sbjct 1534 G-CATGTAGTCAAACCTGGGCACTCATTAGGACACATTAGAGTCCATTCT---TCATTCT 1589 Query 54027 TC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTT 54082 | |||| ||||||||| ||||| || ||||| || || ||| ||||||||||||| | Sbjct 1590 TTTCGACTCTTTTCATAAAAAGATCTGGGATCCAGAGTGC-ATAGAATAGATCTCTGGCT 1648 Query 54083 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT-AATATCAGAATG 54141 |||| ||| || || || ||||||| |||| | ||||| | ||| |||||||| ||| Sbjct 1649 CTATTTTCTTCTTTGCCATGATTCTTTCTAAGTTAAAGGAA-GTCATAAATATCAGCATG 1707 Query 54142 CCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 54201 ||| ||||| | || | | | |||| | || ||||| ||||| | || Sbjct 1708 CCAAGGTTCTACATAGACAGCAAATGCTCCTTTTCTCTTTCCACCTCCTTGATCAACATA 1767 Query 54202 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 54261 ||||| |||| |||| ||||| | | ||| |||| || || || | ||| || || Sbjct 1768 CCTAGCAGTGTCATTAAAAACTTTAAGCATAGGAACAAGTCCGTTTGCATAACCGTTAGT 1827 Query 54262 CCCGGAGATAT-AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTG 54320 || |||| || || || || | |||| | ||||| || || || |||| Sbjct 1828 TCCTCTAATATAAGAATCTGCT-GCTCTTATATCTGAGACTGATACTCCAATGCCACCTG 1886 Query 54321 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 54380 | || ||||| | || | || | || ||| |||| || |||| | ||| | Sbjct 1887 CGGCCTTGGAGATAACAGCAATTTACTTGAGTGTTTCAAAGATACCTTCTACAGAATCTT 1946 Query 54381 CCATCAT-GTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGTTCCCGCATTAA 54437 | |||| ||||| ||| ||||| | ||| | ||| | || || || || | Sbjct 1947 CTTTCATAGTTAA-TAGGAAACAAGAACTCATCTAAGGTTTTG--GGGTACCTGCGTTGA 2003 Query 54438 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAG 54497 | | ||||||| ||| || || |||||| || | | || || ||| || || | || Sbjct 2004 AAAGTGTAGGAGTAGCATGAGTGAACCATAATTGACTCATTAAATCGTAGGTTTCAAAAG 2063 Query 54498 CTGAGTCTATATCCCATTGATGAATTCC--TACTGCGACACGCATTAACATGTGCTGAGG 54555 | | || | ||| || || || || |||| || | ||| | |||||| ||||| Sbjct 2064 CCGCTTCAAGATCATCTTTTTGGATGCCAATACT--TACTCTCATAAGCATGTGTTGAGG 2121 Query 54556 TCTTTCAACGATCTT-GTTGTTTATTTTCAGCAAG-TAGGATTTTTCCAAAGTTTTAAAA 54613 |||||| | || || ||| | |||| | ||| || | | |||| | |||| ||||| Sbjct 2122 TCTTTCTATAATTTTAGTTCCCTCTTTTAA--AAGATAAGCTCTTTCTAGAGTTCTAAAA 2179 Query 54614 CCAAAATAGTTGTA 54627 ||||| || | ||| Sbjct 2180 CCAAAGTAATCGTA 2193 >seq5752 Length=1520 Score = 138 bits (152), Expect = 1e-27 Identities = 399/601 (66%), Gaps = 10/601 (2%) Strand=Plus/Plus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| |||||||| ||| | ||||| || | | || | || || || || ||||| Sbjct 511 ACAAGCGAAATCAGTGTGCATGCCCTCATCACGAGAGATAAGCTCATTTGAGAAAGTGAG 570 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGA 24252 || ||||| || ||||||||||| ||||| || || || ||| || || || ||||||| Sbjct 571 GCCTGGCATGAGACCACGCTTTTTTAGCCAGAAGATTGA-GCAGAAAGACCCTGAAAAGA 629 Query 24253 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG-CTGTCATGT 24311 |||||||||| | || || || |||| |||||||| |||| | | ||| || Sbjct 630 AAATTCCTTCAATAGCAGCGAAAGCAACGAGTCTTTCAGCATAGCTATTGTCTGAACTG- 688 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 ||||| | ||||| || || ||||| | ||| || || ||||| || Sbjct 689 ATCCATCTCATTGCCCATTCAGCTTTCTTAGTAACAACTGGGATAAAGGAGATAGCTTTG 748 Query 24372 AAGAG-ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 ||||| ||| | || || | || ||| | |||||||| | ||| ||| | Sbjct 749 AAGAGCATA-TCCTTCTCCTAGGCGTCGCTAATAAGGGTATCAATAAGGAGAGAATAGGT 807 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || || |||||||| || || ||||| |||||| ||||| || | || || | | Sbjct 808 CTCTGAGTGAATGTTCTCCATCATCATTTAAAATCCATAGAAGCAACGTGCTTCAGGGAC 867 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 | | ||| | || |||| || || ||||| ||| || || |||||||| ||||| Sbjct 868 TTAGATTTCAGTGCAGAATCTTTGAGCCAAATTCTCAACTACAATACCGTCACTAGCTGC 927 Query 24551 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGTTTATTCCAAT 24609 || || || | || || || || || | |||| | | || | ||| | | ||||| Sbjct 928 GAAGAAAGCTAGAACGTGCTTAATGAAGTGGCGTTCGTTATCGT-TGAGTCTCTCCCAAT 986 Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC-TCTGCCTTT 24668 | || | ||| | | | ||| | ||||| | ||||| |||| |||| |||| | Sbjct 987 CTTTAACATCAGTGGCGAGATCGATCTCTTCTGCAGTCCAGAATGCTGCCATCTG-ATCC 1045 Query 24669 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTT 24728 || ||||| ||||||||||| | || || || | ||| || ||||| || || ||| Sbjct 1046 TTGTACATTTTCCAGATGTCGTTGTACCTGATAGGTAGAATGACGAATCTGTTAGGGTTT 1105 Query 24729 T 24729 | Sbjct 1106 T 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593533160185680