Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq5918 102 7e-17 seq19711 95.1 1e-14 >seq5918 Length=2920 Score = 102 bits (112), Expect = 7e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG--GAAC 29016 |||||| | |||||| |||| || ||||||||||| || ||||| | | ||| |||| Sbjct 2821 AAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTAC--TCTAGACGTTGAAC 2764 Query 29017 CCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAG 29076 || | || || | | | | ||| || ||| || |||||||| | ||| | Sbjct 2763 CCTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTG 2704 Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATT 29136 ||||||| ||||| |||||||| || || || |||||||| | ||| || | || | Sbjct 2703 ATCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACT 2644 Query 29137 ACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||||| || |||||||| ||||| || |||| || Sbjct 2643 ACAATATCCAAAAGGAATCCACTCTCCATTTGGTCTT 2607 >seq19711 Length=592 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||| |||| ||| | || || | || ||||| ||||| ||| ||| || || || Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || || || || |||||| | ||| |||||| Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||||||||| || || || ||| |||||||| | ||| | | || |||||| Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGA 29186 ||||| |||||||| ||||| ||| |||| || || | ||||| Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTTGAGACTTAGAGGA 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428203450220105