Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq15535 140 5e-28 seq10285 129 9e-25 seq5918 111 2e-19 seq20138 102 1e-16 seq20137 102 1e-16 seq15980 102 1e-16 seq19711 95.1 2e-14 >seq15535 Length=2413 Score = 140 bits (154), Expect = 5e-28 Identities = 379/575 (66%), Gaps = 4/575 (1%) Strand=Plus/Minus Query 205359 TAATTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATG 205418 |||||||| |||||| || |||||||| || | || |||| ||||| | ||| Sbjct 1574 TAATTGTTCTTTTAAGGGATCGATATGATTCTTGTAAACGTGAGCATCACCAAGAACATG 1515 Query 205419 AATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATA 205478 ||| ||||| | || | || | | | |||| |||| |||| |||||| ||| Sbjct 1514 AATGAATTCTCCTCTCTTGAGATCACAAACTTAAGCAAGCATACAAGTTAATAAAGCATA 1455 Query 205479 ACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACA 205538 ||||||| || || || ||||||| |||||||||| |||||||||||||||||| || Sbjct 1454 GCTAGCAATGTTGAAGGGAACACCTAGACCCATATCACATGATCTTTGATACATTTGGCA 1395 Query 205539 TGTAAGATATTTATTATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAAC 205598 | || | || | | |||| ||| | | ||| | ||| || ||||| | | | Sbjct 1394 ACTGAGTTTCCCATCAGAGCTCACATAAAACTATGCAAGAATATGGCATGGTGGGAGAGC 1335 Query 205599 CATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGttt 205658 ||| || ||| ||| | |||||| || | | | ||| ||| | ||| || Sbjct 1334 CATTTTGCCAAGATCAGCTGCATTCCATGCACTCATAACAATACGTCTGCTTGTAGGGTT 1275 Query 205659 attttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGT 205718 || |||| | ||| |||| | | || || |||||| ||||| |||||| || Sbjct 1274 TTTCTTTAACTGATTGATAACGTCCGCTAGTTAATCAAAGCCTTGTCCACTATAATCAGT 1215 Query 205719 ATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAA 205778 | ||| | ||| |||||| ||||| | |||||| || ||||| |||||||||| Sbjct 1214 GTGCATCGTATCATAAGCAGCACCGAAATGTCTCCATTGGAATCCATAGACTGGACCTAG 1155 Query 205779 ATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttc 205838 || | || | | || | | ||||| | | || ||| | ||| ||||| | Sbjct 1154 GTCCCACTCCTCACGATGAGTTAAACCGATCTAGTCTAAGAATTATCTTGAAGCATTTCC 1095 Query 205839 atcccaaatatggattcctttattttttaGAATATTTGTATTAGT-TGATCCAGATATAA 205897 |||||||| | ||| ||||| ||| | | || | ||| || | | || | | || Sbjct 1094 GTCCCAAATCTTGATCTTTTTATCGCTTAAATTCTTAGCATTTGTATCACCCTTA-ACAA 1036 Query 205898 ACCATAATAA-TTCTTCAACAATTCCTCTCCAAAA 205931 |||| ||||| ||| ||| | | |||||||| || Sbjct 1035 ACCA-AATAAGTTCCTCAGCTACACCTCTCCAGAA 1002 >seq10285 Length=3207 Score = 129 bits (142), Expect = 9e-25 Identities = 180/248 (73%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 124557 ACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAATGATACAATTTCTAATTT 124615 || ||||| || ||| || |||||||| | || |||| | |||||| |||| Sbjct 1089 ACTCTAACTGGAAAAGTAATTACTATAGATGTAGAGAGCATAACC-ACAATTGAGGATTT 1031 Query 124616 AAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGC 124675 |||| || || |||||| ||||||||| || ||||||||| | || ||||||||||| Sbjct 1030 AAAATAGTTGATACAAGATGCAGAAGGTATCCCTCCTGATCAATAGAGACTTATTTTTGC 971 Query 124676 AGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735 ||| ||| ||||||| |||| | |||| || | ||||||||||| ||| ||| |||| Sbjct 970 AGGGAAATAATTAGAAGATAATAGAACTTTGGCTGATTATAATATATAAAGAGATTCAAG 911 Query 124736 TTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA-AATTCATAAAAATTGATT---G 124791 | ||||| || ||| | || ||||||| || ||| |||| | | || || || | Sbjct 910 ACTTCATTTAGTGTTAAGGCTAAGAGGTGGAATGAAAGTATTCCTCAGAAGTGGTTAGAG 851 Query 124792 TAAATAAA 124799 ||||| || Sbjct 850 TAAATTAA 843 >seq5918 Length=2920 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 || |||| | ||||| | ||||| | || ||||| || || ||| |||| ||||| | Sbjct 2822 TAAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACC 2763 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 ||| || || || | || || |||||||| |||||||| || || ||||| Sbjct 2762 CTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGA 2703 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 |||||| || || || ||||||||||| |||| || ||| | |||| || || || Sbjct 2702 TCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTA 2643 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||| ||||| ||||| ||| | |||||||| || Sbjct 2642 CAATATCCAAAAGGAATCCACTCTCCATTTGGTCTT 2607 >seq20138 Length=732 Score = 102 bits (112), Expect = 1e-16 Identities = 188/272 (69%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || |||| ||||| || || || ||||| ||| | || | || || Sbjct 592 AATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCATC 533 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | || || || ||||| || || ||||| ||||||||||| Sbjct 532 TGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGATCA 473 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | | || || || ||||| ||||| ||||||| || | |||| || ||||| || Sbjct 472 ATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTACAA 413 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 ||| || ||||||||||| | || ||||| || | | |||| ||||| || | || Sbjct 412 TATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGGTATGTAGATCTT 353 Query 124777 CATAAAAA--TTGATTGTAAATAAATATCACT 124806 | | || | |||| || ||| | ||||||| Sbjct 352 CGTTAAGACTTTGACTGGAAA-GACTATCACT 322 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 ||||| | || || || ||||| ||| | || |||| | | ||| || ||| ||| Sbjct 348 AAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACCATTGAAAAT 289 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || || || |||||||||||||||| ||||| |||||||| || | ||||| Sbjct 288 GTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGATTGATTTTC 229 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || ||||| ||| | |||||| | |||| | || || || |||||||| || ||| Sbjct 228 GCCGGAAAGCAACTTGAGGATGGAAGAACCCTTTCTGACTACAACATTCAAAAGGAGTCA 169 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || | || |||||| | | | |||||||| Sbjct 168 ACCCTCCACTTGGTTCTCAGACTCAGAGGTGGT 136 >seq20137 Length=989 Score = 102 bits (112), Expect = 1e-16 Identities = 188/272 (69%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || |||| ||||| || || || ||||| ||| | || | || || Sbjct 849 AATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCATC 790 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | || || || ||||| || || ||||| ||||||||||| Sbjct 789 TGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGATCA 730 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | | || || || ||||| ||||| ||||||| || | |||| || ||||| || Sbjct 729 ATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTACAA 670 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 ||| || ||||||||||| | || ||||| || | | |||| ||||| || | || Sbjct 669 TATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGGTATGTAGATCTT 610 Query 124777 CATAAAAA--TTGATTGTAAATAAATATCACT 124806 | | || | |||| || ||| | ||||||| Sbjct 609 CGTTAAGACTTTGACTGGAAA-GACTATCACT 579 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 ||||| | || || || ||||| ||| | || |||| | | ||| || ||| ||| Sbjct 605 AAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACCATTGAAAAT 546 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || || || |||||||||||||||| ||||| |||||||| || | ||||| Sbjct 545 GTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGATTGATTTTC 486 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || ||||| ||| | |||||| | |||| | || ||||| || | ||||||||| Sbjct 485 GCCGGAAAGCAACTTGAGGATGGAAGAACCCTCTCTGACTATAACATCTAGAAAGAATCA 426 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| | || ||||| | | || |||||||||| Sbjct 425 ACTCTTCACTTGGTCCTCAGACTAAGAGGTGGTAT 391 >seq15980 Length=3053 Score = 102 bits (112), Expect = 1e-16 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 124540 TGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATG 124599 || |||||||| |||| || |||| || ||||| || ||||| | | | | || Sbjct 2173 TGGAAATATTTGTAAAAACTTTAACTGGAAAAACAATCACTATTTACTGCAATGGAGGTG 2232 Query 124600 ATACAATTTCTAAT--TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| ||| |||||| | ||| || | ||||||||||| || || || ||||| Sbjct 2233 ATACAATTG--AATCATTAAAAGAAAAAGTTTAGGATAAAGAAGGAATTCCTCCAGATCA 2290 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| | |||||||| |||| |||||||| || || || || || |||| Sbjct 2291 ATAAAGAATGATTTTTGCTGGAATGCAATTAGAAAATCACTTCACCTTGGACGAATATAG 2350 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTA 124751 ||| |||| ||||| || | ||||| |||||| Sbjct 2351 AATTTAAAATGAATCTACACTTCATTTAGTTTTA 2384 >seq19711 Length=592 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||| || | ||||| || || ||||| || || || | || |||| | Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || || | || || |||||||| || || |||||| Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| ||||| || || ||||| ||||| || ||| | ||||| | || || ||| Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 |||||||| ||||| ||| | || ||||| || Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTT 579 Score = 87.8 bits (96), Expect = 3e-12 Identities = 161/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||| || | || || || || ||||||||||| || | || ||||| | Sbjct 140 ATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACCCTCA 199 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || || ||||| || |||||||| || || |||||| Sbjct 200 GACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAA 259 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || || || || |||||| || | || || | |||| | || || || Sbjct 260 CAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACTACAAC 319 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 || ||||||||||||||| | || |||||| | | || |||| ||||| |||| Sbjct 320 ATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGGTATGTAAA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755216227708800