Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq19003 89.7 6e-13 seq20137 86.0 7e-12 seq19711 86.0 7e-12 >seq19003 Length=4686 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2104 CTCCGCGACCGGGAATTGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 2045 Query 60126 TACTACCGAGGATT 60139 ||||| || ||||| Sbjct 2044 TACTATCGCGGATT 2031 >seq20137 Length=989 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| |||| | || | | || |||||||| ||||||||||| Sbjct 201 CTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAA 260 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || |||| || || |||| || | | || |||||| || || || | | Sbjct 261 GATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTCCTAAATCTTGGCCTTAACATT 320 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| | || ||||| | ||||||||||| || || || ||||| || Sbjct 321 CTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAAC 380 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 381 AAAGATTTGCAT 392 >seq19711 Length=592 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 42959 TCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAG 43018 |||||| | | ||| ||||| || | ||| ||||||||||||||||| |||| || Sbjct 592 TCCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAG 533 Query 43019 AGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCAC 43078 || | | || || | ||||| || ||||| || |||| || || |||| || | Sbjct 532 TGTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAAT 473 Query 43079 GCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATC 43138 | ||||||||| ||| || |||| || | | || || | || ||||| Sbjct 472 ACCTTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATC 413 Query 43139 GACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| ||||| || || ||||| || ||||||| ||| Sbjct 412 GAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571636112241480