Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq20137 111 2e-19 seq5918 104 3e-17 seq10285 102 1e-16 seq19711 100 4e-16 seq20138 96.9 5e-15 seq15980 96.9 5e-15 seq22432 86.0 9e-12 >seq20137 Length=989 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| | ||||| || | ||| |||||||| | || ||||| || || Sbjct 394 CCACCTCTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAG 453 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | ||| || | ||| ||||| || ||||||||||| || ||||| || || Sbjct 454 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 513 Query 146171 ATTCCTTCTTTATCTT 146186 || ||||||||||||| Sbjct 514 ATACCTTCTTTATCTT 529 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||||||||| || ||||| || | || |||||||| ||||| ||||| || Sbjct 622 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 681 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| || ||||||| ||||||||||| || | ||| | ||||| || || Sbjct 682 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 741 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 742 ATACCCTCCTTGTCTTG 758 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| |||||||| ||||| || | || || || ||| || || || || || || Sbjct 166 CCACCTCTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGA-ATGTTGTAGTCAGA 224 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| |||| ||||| ||||| || || | ||| | ||||| || || Sbjct 225 TAAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGG 284 Query 146170 AATTCCTTCTTTATC 146184 |||||||||||| || Sbjct 285 AATTCCTTCTTTGTC 299 >seq5918 Length=2920 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || |||||||| | ||| ||||| || ||||| || || || Sbjct 2592 CCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGAC 2651 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||| ||||| ||||| |||| ||| || ||||| || || Sbjct 2652 AAGGTTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGG 2711 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 2712 ATTCCTTCTTTGTCTTG 2728 >seq10285 Length=3207 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || ||||| | | || ||| | ||||||||||||| | Sbjct 879 TTCCACCTCTTAGCCTTAACACTAAATGAAGTCTTGAATCTCTTTATATATTATAATCAG 938 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | |||||| |||| ||||||| ||| || |||||||| | ||| | ||||| |||| Sbjct 939 CCAAAGTTCTATTATCTTCTAATTATTTCCCTGCAAAAATAAGTCTCTATTGATCAGGAG 998 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || |||||| |||||| Sbjct 999 GGATACCTTCTGCATCTTG 1017 >seq19711 Length=592 Score = 100 bits (110), Expect = 4e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 146054 CCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAG 146112 ||||||||||| || ||||| || | ||| |||| |||| || ||||| || || ||||| Sbjct 591 CCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGA-ATATTGTAGTCAGAAAG 533 Query 146113 AGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAAT 146172 ||||| | ||| || ||||| ||||| || || || | |||||| ||||| || ||||| Sbjct 532 TGTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAAT 473 Query 146173 TCCTTCTTTATC 146184 ||||| || || Sbjct 472 ACCTTCCTTGTC 461 >seq20138 Length=732 Score = 96.9 bits (106), Expect = 5e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| ||||| | ||||| || | || || || ||| || || || || || || Sbjct 137 CCACCTCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGA-ATGTTGTAGTCAGA 195 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| ||||| | ||| || | ||| ||||| || ||||||||||| || ||||| || || Sbjct 196 AAGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGG 255 Query 146170 AATTCCTTCTTTATCTT 146186 || ||||||||||||| Sbjct 256 GATACCTTCTTTATCTT 272 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||||||||| || ||||| || | || |||||||| ||||| ||||| || Sbjct 365 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 424 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| || ||||||| ||||||||||| || | ||| | ||||| || || Sbjct 425 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 484 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 485 ATACCCTCCTTGTCTTG 501 >seq15980 Length=3053 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATC-TGA 146109 || ||||| |||||||| || ||||| | |||||||| || | || |||| || | Sbjct 2398 CCTCCTCTGAGTCTTAAAACTAAATGAAGTGTAGATTCATTTTAAATTCTATATTCGTCC 2339 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || | || |||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct 2338 AAG-GTGAAGTGATTTTCTAATTGCATTCCAGCAAAAATCATTCTTTATTGATCTGGAGG 2280 Query 146170 AATTCCTTCTTTATC 146184 ||||||||||||||| Sbjct 2279 AATTCCTTCTTTATC 2265 >seq22432 Length=1210 Score = 86.0 bits (94), Expect = 9e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 146058 TAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTC 146117 |||||||||| || ||||| | | ||| | | |||| ||||| || |||||| Sbjct 624 TAAGTCTTAAAACTAAATGAATTGCTGATGCATCTTATATTTTATAGTCATCCAGAGTTT 683 Query 146118 TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTT 146177 || ||| ||||||| |||| |||||||||||||||| ||||| || ||||| |||| Sbjct 684 TGTAATCTTCTAATTACATTCCTGCAAAAATCAATCTTTATTGATCTGGGGGAATCCCTT 743 Query 146178 CTTTATC 146184 || |||| Sbjct 744 CTATATC 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743290414014720