Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15535 87.8 4e-12 >seq15535 Length=2413 Score = 87.8 bits (96), Expect = 4e-12 Identities = 309/473 (65%), Gaps = 11/473 (2%) Strand=Plus/Plus Query 35229 TTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCA 35288 |||| ||||| || | | ||||||||||| || | || ||||| ||||| | | Sbjct 982 TTCTTACTACTAAAGATGTATTCTGGAGAGGTGTAGCTGAGGAACTTATTTGGTTTGTTA 1041 Query 35289 GGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATG 35348 ||| ||||| | || || | || | | || ||||| | || ||| ||| |||| Sbjct 1042 AGGGTGATACAAATGCTAAGAATTTAAGCGATAAAAAGATCAAGATTTGGGACGGAAATG 1101 Query 35349 GGTCGCGGGAATTTTTGGACAGTAGAG-GGTTATACG-ATAGAGCAGAGGGAGATTTGGG 35406 || | |||| || ||| |||| |||| || || | | ||| | || | || Sbjct 1102 CTTCAAGATAATTCTTAGAC--TAGATCGGTTTAACTCATCGTGAGGAGTGGGACCTAGG 1159 Query 35407 ACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATAC-CTGTTCTTCCG 35465 || || || |||||||||||| | ||||| ||||||| |||||||| || | | | Sbjct 1160 TCCAGTCTATGGATTCCAATGGAGACATTTCGGTGCTGCTTATGATACGATGCAC-ACTG 1218 Query 35466 ATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATC 35525 |||||| |||| | || ||||| || | || | | | || | | | |||||| | Sbjct 1219 ATTATAGTGGACAAGGCTTTGATTAACTAGCGGACGTTATCAA-TCAGTTAAAGAAAAAC 1277 Query 35526 CAGATGA-TAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 | | | ||| | || |||||| ||||||||| | |||||| | |||||| Sbjct 1278 CCTACAAGCAGACGTATTGTTATGAGTGCATGGAATGCAGCTGATCTTGGCAAAATGGCT 1337 Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGTG---GCTAATGGAGAATTGTCGTGC 35641 || || |||||||| || ||| | ||||||||| || |||| || | ||| Sbjct 1338 CTCCCACCATGCCATATTCTTGCATAGTTTTATGTGAGCTCTGATGGGAAACTCAGTTGC 1397 Query 35642 CAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 || ||||||| || | ||| | || | || || |||||||| ||||| Sbjct 1398 CAAATGTATCAAAGATCATGTGATATGGGTCTAGGTGTTCCCTTCAACATTGC 1450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989262066368405