Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6480 284 2e-71 seq16451 271 1e-67 seq5752 136 5e-27 >seq6480 Length=2904 Score = 284 bits (314), Expect = 2e-71 Identities = 759/1138 (67%), Gaps = 28/1138 (2%) Strand=Plus/Minus Query 65529 TCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 65587 ||||| ||||| ||| || | |||| || || ||||| |||| || |||||||||||| Sbjct 1837 TCAAA-GGATATTTTGAGCATCATAAGGGCATCAGCTAAACCTTAAATACCAATACCGAT 1779 Query 65588 AGGTCTATGTCTCTTATTAGAGATTTCAGCTTC-TGGAATAGGATAATAATTAATATCTA 65646 |||||| |||||| | |||||| | ||||| | | | |||||| | || | |||| Sbjct 1778 AGGTCTGTGTCTCATGTTAGAGTTGCGGGCTTCATCGCA-AGGATAGAAGTTGTTGTCTA 1720 Query 65647 TAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 65706 | ||| |||| | ||| | |||| || | || | | || || | |||||| Sbjct 1719 TGATTCTATTTAAATTACGAGTAATTTGCATGGCTACTTAATGAAGCTTATCATAATCAA 1660 Query 65707 ATCGCTC-ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACC 65765 | |||| || | | || | || | ||||| | ||| || || |||||| Sbjct 1659 AG-GCTCCATTTGAAATGAAGCGAGGAAGTGAGATTGATGCTAAATTGCATACAGCTACC 1601 Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 65825 |||| | | ||||| || |||||| ||||| ||| | |||||||||||| Sbjct 1600 TCATCTGGGGAAGTATATTCAATGATCTCACAACAAAGGTTAGAGCTCTTGATGGTTCCA 1541 Query 65826 AAATTTTGTTGATTACTCTTTTTGTTA-CACGCATCCTTATAAAGAATGAATGGAGTACC 65884 | ||| | || |||||| || |||| || | ||| || ||||| ||| ||||||| || Sbjct 1540 AGATTCTTTTAATTACTTTTACTGTTGGCATG-ATCTTTGTAAAGCATGTATGGAGTTCC 1482 Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944 ||||||||| | ||| ||||| |||| ||| | | |||| |||| |||| ||| Sbjct 1481 AGTTTCAATTTAGCTTTCAATAATAGCTTCCCAAAGTTTTTGAGC-TTTA--ATAGTTTT 1425 Query 65945 G-TATCTCTTTTCTCTT--TCGTAT--AGTGTATACAATCGTTCGAACTCGTCTCCCCAA 65999 | | | ||||| |||||| |||||||| | ||||||| ||||| Sbjct 1424 TCTGCCGATACCCTCTTGTTCGTATCTAGTGTATAGCTTAA--CGAACTCTTCTCCGTGG 1367 Query 66000 ACATTGTCCAAT----CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 66055 || | | ||| || | | ||||| || || | || | ||| ||||| | ||| Sbjct 1366 ACCT---CAAATAAACCCTTGGC-TTCATTGGGGCAGAATAAGGTCCAGTCTCCATTATC 1311 Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 | |||| || ||||||||||||||||| ||| | ||| | || | |||||| | ||| Sbjct 1310 TCTTACTCTTTCCATAAAGAGATCAGGAACCCACAAAGCAAAGAAAAGATCTCTTGCTCT 1251 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 |||||||| || || ||| || || | ||||| | | || ||| ||||| Sbjct 1250 TTGTTCCTCTTTACCGTGATTTTTACGGAGCTATAGGAAATCAAAGATGTCAGCGTGCCA 1191 Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 66235 ||||| || || ||||| | | ||| | || || || ||||||| || | Sbjct 1190 TGGTTCTAAATAGATGGCGAAAGATCCTTTTCTCTTACCACCACCTTGATCTACATAACG 1131 Query 66236 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 66295 || || | ||| | ||||||| ||| || | || ||||| || ||| || || || Sbjct 1130 GGCAGTTTCATTGAAGACTCTCAGCATGGGTACAAGGCCATTAGAATGACCGTTTGTTCC 1071 Query 66296 GGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCAT 66355 ||| ||| |||| | || | ||| ||| || | || || | ||| || || | Sbjct 1070 CTTGATGTAGGATCCAGTAGCTCTAATGTTATGAACAGCAAGTCCAACTCCTCCAGCACT 1011 Query 66356 TTTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGCCCTCTATACTATCATCCA 66414 |||||||| | ||| || | || || |||||||| || ||| || ||||||| Sbjct 1010 CTTAGAGATAAGAGCG-ATATTCTTCAAAGTATCATATATACCCATAATTGAATCATCCT 952 Query 66415 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 66474 |||| | || | |||||||| |||||| | | |||||| |||||||||| | Sbjct 951 TCATCATGAGCAAGAAACAGCTGCTCATTTGAGGTTTAGGAGTTCCGGCATTAAATAGAG 892 Query 66475 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 66534 |||||| |||||| || |||||| | ||| | || || || || ||||| || || | Sbjct 891 TAGGAGTAGCGTGAGTGAACCATCTATCACTCATAAGGTTATATGTTTCAATTGCAGAAT 832 Query 66535 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 66594 | ||||| || |||||| || |||| ||||||| | ||| | |||||||| ||| Sbjct 831 CAATATCTTCTTTATGAATACCGACTGAAACACGCAAGAGCATTTATTGAGGTCTCTCAG 772 Query 66595 CGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 66652 | || ||| || || || | || || ||| |||| ||||||||||| ||||| || Sbjct 771 CAATTTTGCCATTAATCTTAAGTAAATAAGATCTTTCTAAAGTTTTAAAGCCAAAGTA 714 >seq16451 Length=2876 Score = 271 bits (300), Expect = 1e-67 Identities = 770/1153 (67%), Gaps = 40/1153 (3%) Strand=Plus/Plus Query 65529 TCAAATGGATAATTTAAGAGAATAAA-CGCGTCTGCTAATCCTTGAACACCAATACCGAT 65587 |||||||||| |||||||| |||| || ||||| || |||| |||||||||||| || Sbjct 1058 TCAAATGGAT-ATTTAAGAAGTTAAAGAGCATCTGCAAAACCTTAAACACCAATACCAAT 1116 Query 65588 AGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTA 65646 ||||||||| | ||| || || || ||||||| || || ||||||||| |||| | Sbjct 1117 GGGTCTATGTTTAAGATTTGA-ATATCTTGCTTCTGAAACTGGGTAATAATTATTATCAA 1175 Query 65647 TAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA 65706 | || || || | ||| | |||| |||| ||||| | || || | | ||| Sbjct 1176 TTATCTTGTTTAAATTCTTAGTAATTCTTTTGGTAACATCATGCAACTTCTCATAGTCAT 1235 Query 65707 ATCGCTCA---TC---TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGG 65760 || | | || | |||||||| |||| || || | || || |||||||| || | Sbjct 1236 ATTCTTTAGTTTCTGTTTTTACAAACCTGTTTAAGGCTATTGAGGCTAGATTACATACAG 1295 Query 65761 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 65820 |||| |||| | | ||||| || || ||||| || ||||| || || ||| Sbjct 1296 CTACTTCATCTGGGCTAGTATATTCTACAATTTCAGTACAGAGATTTGAACTTTTTATGC 1355 Query 65821 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 65880 || | ||||||| |||| ||| ||||||| | ||| || || || || |||||| Sbjct 1356 ACCCCAGGTTTTGTTAATTAGATTTTCTGTTACAAGTATCTTTGTATAGCATATATGGAG 1415 Query 65881 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG 65940 | ||||| ||||| |||||||||| |||| |||| | || ||||||||| | Sbjct 1416 TTCCAGTCTCAATTTGAGATTCTACAATCTAGCTCCATAACCATCTAGCCTTTATAGT-- 1473 Query 65941 ATTTGTATCTCTTTTCTCT--TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA 65998 ||| | ||||| |||| ||| ||| | ||| | | ||||| || ||||||| Sbjct 1474 CTTTCTGCCTCTTCCCTCTTCTTCATATTTTTCATAAAGTTTCTCGAATTCTTCTCCCC- 1532 Query 65999 AACAT-TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 66057 | ||| | ||| || || || |||| |||||||| | | ||| ||| |||| || Sbjct 1533 AGCATGTAGTCAAACCTGGGCACTCATTAGGACACATTAGAGTCCATTCT---TCATTCT 1589 Query 66058 T---CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTT 66113 | |||| ||||||||| ||||| || ||||| || || ||| |||| |||||||| | Sbjct 1590 TTTCGACTCTTTTCATAAAAAGATCTGGGATCCAGAGTGC-ATAGAATAGATCTCTGGCT 1648 Query 66114 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT-AATATCATAATG 66172 |||| ||| || || || ||||||| |||| | ||||| | ||| ||||||| ||| Sbjct 1649 CTATTTTCTTCTTTGCCATGATTCTTTCTAAGTTAAAGGAA-GTCATAAATATCAGCATG 1707 Query 66173 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 66232 ||| ||||| | || | || | |||| | || ||||| ||||| | || Sbjct 1708 CCAAGGTTCTACATAGACAGCAAATGCTCCTTTTCTCTTTCCACCTCCTTGATCAACATA 1767 Query 66233 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGT 66292 ||||| |||| |||| ||||| | | ||| |||| || || || | ||| || || Sbjct 1768 CCTAGCAGTGTCATTAAAAACTTTAAGCATAGGAACAAGTCCGTTTGCATAACCGTTAGT 1827 Query 66293 CCCGGAGATAT-AGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 66351 || |||| || || | ||| | |||| | ||||| || || || |||| Sbjct 1828 TCCTCTAATATAAGAATCTGC-TGCTCTTATATCTGAGACTGATACTCCAATGCCACCTG 1886 Query 66352 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 66411 | || ||||| | || | || | || ||| |||| || |||| | ||| | Sbjct 1887 CGGCCTTGGAGATAACAGCAATTTACTTGAGTGTTTCAAAGATACCTTCTACAGAATCTT 1946 Query 66412 CCATCAT-GTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGTTCCCGCATTAA 66468 | |||| ||||| ||| ||||| | ||| | ||| | || || || || | Sbjct 1947 CTTTCATAGTTAA-TAGGAAACAAGAACTCATCTAAGGTTTTG--GGGTACCTGCGTTGA 2003 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 66528 | | ||||||| ||| || || |||||| || | | || || ||| || |||| || Sbjct 2004 AAAGTGTAGGAGTAGCATGAGTGAACCATAATTGACTCATTAAATCGTAGGTTTCAAAAG 2063 Query 66529 CTGAGTCTATATCCCATTGATGAATTCC--TACTGCGACACGCATTAACATGTGCTGAGG 66586 | | || | ||| || || || || |||| || | ||| | |||||| ||||| Sbjct 2064 CCGCTTCAAGATCATCTTTTTGGATGCCAATACT--TACTCTCATAAGCATGTGTTGAGG 2121 Query 66587 TCTTTCAACGATCTT-GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 66645 |||||| | || || ||| | |||| || | || | | |||| | |||| |||||| Sbjct 2122 TCTTTCTATAATTTTAGTTCCCTCTTTT-AAAAGATAAGCTCTTTCTAGAGTTCTAAAAC 2180 Query 66646 CAAAATAGTTGTA 66658 |||| || | ||| Sbjct 2181 CAAAGTAATCGTA 2193 >seq5752 Length=1520 Score = 136 bits (150), Expect = 5e-27 Identities = 399/603 (66%), Gaps = 14/603 (2%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| |||||||| ||| | ||||| || | | || | || || || || ||||| Sbjct 511 ACAAGCGAAATCAGTGTGCATGCCCTCATCACGAGAGATAAGCTCATTTGAGAAAGTGAG 570 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGA 36275 || ||||| || ||||||||||| ||||| || || || ||| || || || ||||||| Sbjct 571 GCCTGGCATGAGACCACGCTTTTTTAGCCAGAAGATTGA-GCAGAAAGACCCTGAAAAGA 629 Query 36276 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTC---AT 36332 |||||||||| | || || || |||| ||||| || |||| | | |||| | Sbjct 630 AAATTCCTTCAATAGCAGCGAAAGCAACGAGTCTTTCAGCATAGCT---ATTGTCTGAAC 686 Query 36333 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392 ||||| | ||||| || || ||||| | ||| || || ||||| | Sbjct 687 TGATCCATCTCATTGCCCATTCAGCTTTCTTAGTAACAACTGGGATAAAGGAGATAGCTT 746 Query 36393 TAAAGAG-ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 36451 | ||||| ||| | || || | || ||| | |||||||| | ||| ||| Sbjct 747 TGAAGAGCATA-TCCTTCTCCTAGGCGTCGCTAATAAGGGTATCAATAAGGAGAGAATAG 805 Query 36452 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 36511 | || || |||||||| || || ||||| |||||| ||||| || | || || | Sbjct 806 GTCTCTGAGTGAATGTTCTCCATCATCATTTAAAATCCATAGAAGCAACGTGCTTCAGGG 865 Query 36512 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 36571 | | | ||| || || |||| || || ||||| ||| || || |||||||| ||| Sbjct 866 ACTTAGATTTCAGTGCAGAATCTTTGAGCCAAATTCTCAACTACAATACCGTCACTAGCT 925 Query 36572 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGTTTATTCCA 36630 || || || || | || || || || || | |||||| | || | ||| | | ||| Sbjct 926 GCGAAGAAAGCTAGAACGTGCTTAATGAAGTGGCGTTCGTTATCGT-TGAGTCTCTCCCA 984 Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC-TCTGCCT 36689 ||| || | ||| | | | ||| | ||||| | ||||| |||| |||| |||| | Sbjct 985 ATCTTTAACATCAGTGGCGAGATCGATCTCTTCTGCAGTCCAGAATGCTGCCATCTGA-T 1043 Query 36690 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGAT 36749 || ||||| ||||||||||| | || || || | ||| || ||||| || | | Sbjct 1044 CCTTGTACATTTTCCAGATGTCGTTGTACCTGATAGGTAGAATGACGAATCTGTTAGGGT 1103 Query 36750 TTT 36752 ||| Sbjct 1104 TTT 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657963904180440