Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq19711 104 2e-17 seq20137 86.0 6e-12 >seq19711 Length=592 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||||| || || |||||||| ||||| || ||||| | || || |||||| Sbjct 349 AACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTGAGAGTTCTTCCGTCTTC 290 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||| | ||| ||||| |||| || | || ||||||||||| || ||||| ||||| Sbjct 289 GAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGGATACCTTCCTTGTCTTG 230 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | ||| | ||||| | ||| || || || | ||| | || || Sbjct 229 GATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACGTCCAAGGTGATAGTTTT 170 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| || | ||||| ||||| |||| ||| Sbjct 169 GCCAGTAAGGGTTTTAACGAAGATTTACAT 140 >seq20137 Length=989 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 || || ||||| | || ||||| ||||||||||| || || | || || ||| Sbjct 181 AAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCT 240 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || |||||||||||||| |||| || | | |||||||| || || ||||||||||| Sbjct 241 TCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTC- 299 Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 | | | || | ||| | | || | |||||| | |||||| || || | ||| | || Sbjct 300 CTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGT 359 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || || | || || || || ||||||||| Sbjct 360 TTTACCAGTGAGGGTCTTAACAAAGATTTGCATA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495906555487200