Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq20138 100 2e-16 seq20137 82.4 6e-11 >seq20138 Length=732 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | ||||| |||| || ||||||||| | ||||| || || | || | | Sbjct 146 AGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTT 205 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || | ||| || ||||| |||||||||| ||||||||||| || | ||||||| Sbjct 206 CCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCT 265 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| | ||||| | ||| ||||| | || ||| ||||| | || Sbjct 266 TTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTG 325 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||| ||||| || | ||| || || || || | ||| Sbjct 326 ATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 >seq20137 Length=989 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 42955 TCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTT 43014 || || | ||| || ||||| |||||||||| ||||||||||| || | ||||||||| Sbjct 466 TCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTA 525 Query 43015 TCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATA 43074 || |||| | ||||| | ||| ||||| | || ||| ||||| | || ||| Sbjct 526 TCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATA 585 Query 43075 GTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || | ||| || || || || | ||| Sbjct 586 GTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381251584104678