Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq15535 118 1e-21 >seq15535 Length=2413 Score = 118 bits (130), Expect = 1e-21 Identities = 400/611 (65%), Gaps = 23/611 (4%) Strand=Plus/Minus Query 6806 TTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTAT 6865 ||||||||||||||| | | ||||||| |||| |||||||| || || || Sbjct 1575 TTAATTGTTCTTTTAAGGGATCGATATGATTCTTGTAAACGTGAGCATCACCAAGAACAT 1516 Query 6866 GAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCAT 6925 |||| ||||| ||| || | |||| | ||| ||||| | | | |||||||| |||| Sbjct 1515 GAATGAATTCTCCTCTCTTGAGATCACAAACTTAAGCAAGCATACAAGTTAATAAAGCAT 1456 Query 6926 AAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGAC 6985 | ||| | || || || ||||||| |||||||| |||||||||||| ||| | Sbjct 1455 AGCTAGCAATGTTGAAGGGAACACCTAGACCCATATCACATGATCTTTGATACATTTGGC 1396 Query 6986 AAGATAAAATATTGTCTATAG----CATAAAATTGACACAA-TACATGACATGGAGGTAA 7040 || | | || | || ||||||| | | ||| | ||| ||||| || | Sbjct 1395 AACTGAGTTTCCCATC-AGAGCTCACATAAAACT-ATGCAAGAATATGGCATGGTGGGAG 1338 Query 7041 AACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGG 7100 | | | | | ||||| || |||||| ||| |||| | ||||||||| | || Sbjct 1337 AGCCATTTTGCCAAGATCAGCTGCATTCCATGCACTCATAACAATACGTCTGCTTGTAGG 1278 Query 7101 ATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATT 7160 ||| | ||||| | | |||| || || ||| | || || || ||||| Sbjct 1277 GTTTTTCTTTAACTGATTGATAACGTCCGCTAGTTAATCAAAGCCTTGTCCACTATAATC 1218 Query 7161 AGTATGACAATTTAT-ATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGAC 7219 ||| || || ||| |||| ||| || |||||||||||||| || ||||| | |||| Sbjct 1217 AGTGTG-CATCGTATCATAAGCAGCACCGAAATGTCTCCATTGGAATCCATAGACTGGAC 1159 Query 7220 CTAAATCACCTTCTTCACGATGATTAAATCCTAATCGA-TTTA--AATTAGATTTTGATC 7276 ||| || | || ||||||||| | || || ||| | | || |||| || |||| Sbjct 1158 CTAGGTCCCACTCCTCACGATGAGTTAAACC-GATCTAGTCTAAGAATT--ATCTTGAAG 1102 Query 7277 CATAAGCATCCCAAATATGTACAGAttttttt----GATAAATTTAAAGAATTTGTAGAT 7332 ||| | |||||||| | ||| ||||| |||||| || ||||||| Sbjct 1101 CATTTCCGTCCCAAATCT----TGATCTTTTTATCGCTTAAATTCTTAGCATTTGTATCA 1046 Query 7333 CCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTG 7392 || |||| ||||| | |||||| || ||| || | ||| || | ||| ||||| Sbjct 1045 CCCTTAACAAACCAAATAAGTTCCTCAGCTACACCTCTCCAGAATACATCTTTAGTAGTA 986 Query 7393 AATAAAGGGAA 7403 | | |||||| Sbjct 985 AGAATAGGGAA 975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595682877675600