Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq23162 172 7e-38 seq23963 89.7 6e-13 >seq23162 Length=1931 Score = 172 bits (190), Expect = 7e-38 Identities = 182/240 (76%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 135876 TTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTG 135935 |||| |||||||| || || || ||||| |||||||| ||||||||||| || ||||| | Sbjct 1477 TTGTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAG 1536 Query 135936 GGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTG 135995 | || || || ||||| ||||| || || |||||||| || || || || || | | Sbjct 1537 GTGTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAA 1596 Query 135996 TACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAG 136055 | || || || ||||| ||||| || |||||| ||||| |||||||||| Sbjct 1597 TTCGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAG 1656 Query 136056 AGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCGT 136115 ||||||| || ||||| || ||||| |||||||| |||||| | ||||||||||| |||| Sbjct 1657 AGACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGCGT 1716 >seq23963 Length=704 Score = 89.7 bits (98), Expect = 6e-13 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 136118 TTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGG 136177 ||||||||| ||||| ||||||| ||| | ||||||||||| ||||| |||||||| Sbjct 46 TTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCTGG 105 Query 136178 TTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAACCAG 136237 ||| | || | || |||| || ||||| |||||||| || || || || || || || Sbjct 106 TTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT-AATTTTAATGAG 164 Query 136238 TCCATTGTA 136246 || ||||| Sbjct 165 CCCCTTGTA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627768690806400